Ctenopharyngodon idella (grass carp): 127506188
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Entry
127506188 CDS
T08802
Name
(RefSeq) POU domain, class 6, transcription factor 2
KO
K09368
POU domain transcription factor, class 6
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127506188
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127506188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Saf4_Yju2
HOCHOB
LAT
FtsX_ECD
FAM176
Motif
Other DBs
NCBI-GeneID:
127506188
NCBI-ProteinID:
XP_051738356
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All DBs
Position
23:21601117..21715086
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AA seq
686 aa
AA seq
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MITGQLSKPLLPLRADMDVCELRDDDKAASPDSELNEEPLLLSADTDSEEKMYGGRVGSV
QSDASSSPTEHGHMGQSHPTYPLGPQSLLVAQQLASAVSGVMSGGAPGLNQPILIPFNAG
GHLGGQQGLVLSLPTAANIQGLVAAAAAGGIMTLPLQNLQATSSLNSQLQHLQQLQQLQH
HQQQHHHHQQQQHQQQQQQQREREREQRERDQQQREREQHQHLCGPTHLQPPSHHQLTPP
IQSQVSGHSPGSASTCTTSNHSSAQPPQSPPPHRQNHSPARSLPSPVTPPLPLQLNPLAS
QAAVAAAAAMGSIAGSQVFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNSVGPSSQSGG
GTPSLQVQPITPQLLTNAQGQIIATVIGNQILPVINTQGITLSPIKPGQQLPQAGQASQA
PPVSQPSLLRMPHSQSPLRQASSSSSTSSSSSSALSVGQLVSNPQTAPSEVDGVNLEEIR
EFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILRSHFFLPQEAQENTIAS
SLTGKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAEARHRSGMQNLTEFIGSEPS
KKRKRRTSFTPQALEILNSHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNT
IKRLKQPELGPVAPMDPLVDNMEEHP
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagggcagctgagcaaaccgctgctccccctgcgtgccgatatggacgtctgc
gagctgcgggatgacgacaaagcggccagcccggacagcgagctcaacgaggagcccttg
ctgctgtcagctgacacagactcggaagagaagatgtatgggggtcgagttggttcagtt
cagtctgatgccagcagcagtcccacagaacacggtcatatgggtcaatctcaccccacg
taccctctaggaccacagtctctactggttgctcagcagctggcatcggcagttagtgga
gtgatgtccggtggagctccgggtctgaaccagcccattctcatcccctttaatgctggt
gggcatctgggtggacagcagggcctggttctctctctgcccactgctgccaacatacag
ggcctggtggcagccgctgctgctggtggcatcatgacactccccctacagaatctgcaa
gctacctcatccctaaactctcagctccagcatctccaacaactccaacagctacagcat
caccagcaacagcatcatcatcatcaacagcagcagcaccaacaacaacaacaacaacag
cgagaacgagaacgagagcagcgcgaaagagaccaacaacaacgagaacgggagcagcac
caacatctctgcggcccaacgcatctccagccacccagccatcatcagctcactcctccg
atccaatcacaagtgtctggacattctccaggctccgcctccacctgtaccacctctaat
catagctcagctcagcctccccagtctccgccccctcacaggcaaaaccattcaccagct
cgcagcctgccatcacctgtcacacctcctctaccactacagctcaaccctctggccagt
caggcagcggttgccgcagcagcagcgatgggttcaattgccgggtcacaggtgtttgga
aatgctctctccagcctgcagggggtcactggacaactggtcaccaatgcacaaggacag
atcattggtacgatccctctgatgccaaactctgtaggaccttccagccaatcagggggc
ggcactccctctctgcaggtccagccaatcacaccacagctgctgaccaatgcacagggt
cagattatagccactgtgattggcaaccagatcctgccagtgatcaacacccagggaatc
acactgtcgcccattaaacctggacagcagctgccacaggccggccaggcttcacaggcc
cctccagtttctcagccaagtctgctccgtatgccccacagccagagccccctccgccag
gcctcttcctcctcctcaacatcatcatcctcatcctctgccctcagcgtcggccagcta
gtcagcaaccctcagactgcacccagtgaggtggatggtgtaaacctggaggagattcga
gaattcgccaaagcgtttaaaattcgccggctgtctctgggtctgactcaaactcaggtg
ggccaggccctcagtgcaactgaaggccctgcctacagccagtctgccatctgcagacac
accatcctgagaagccactttttcctaccacaggaagcccaagagaacactatagctagc
agtctgacaggcaaactgaaccctggccttttatatcctgccaggttcgagaagttggac
atcaccccaaaaagcgcccagaagattaagcctgtgctggagcgctggatggccgaggcg
gaagcccgccatcgctccggtatgcagaacctgaccgagtttatcggcagcgagccctcc
aaaaagcgcaaacggcggacctctttcacgccacaggctctggaaatcctcaacagtcac
ttcgagaagaatactcacccctccggtcaggagatgaccgaaatcgctgagaaactgaac
tacgatcgcgaggtggtgcgcgtctggttctgcaataagaggcaagcattgaaaaacact
attaagaggctgaaacagcccgagctcgggccggtcgcaccaatggaccctctggtcgat
aatatggaggaacatccttag
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