Ctenopharyngodon idella (grass carp): 127506617
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Entry
127506617 CDS
T08802
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cide00535
]
127506617
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127506617
04091 Lectins [BR:
cide04091
]
127506617
Proteoglycans [BR:
cide00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
127506617
Glycosaminoglycan binding proteins [BR:
cide00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
127506617
Lectins [BR:
cide04091
]
C-Type lectins
Lecticans
127506617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
I-set
EGF
EGF_C8A_B_C6
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
127506617
NCBI-ProteinID:
XP_051739128
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All DBs
Position
24:15911592..15922251
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AA seq
1166 aa
AA seq
DB search
MSLIWLLLYACIHAIYGMIFFGDMADQDSTLSVSIPVEQPLRPLLGGSMVIPCYFQDNTV
QDPGAPTITPLSHRIKWSYIYKGKISLILVASDGMVQVERDYLDRVHMVNYPMVPTDATI
EISELRSRDSGSYRCEVMQGIEDNYDSVEMQVQGIVFHYRAISTRYTLTFEMAKAACIQN
SAVIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPREPCYGDKENFPGVRTYGVRDI
NETYDVYCFAEKMSGRVFYSMSVEKFTFAEAEDQCAKLGAQLATTGQLYLAWKTGMDVCN
AGWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPTSRYDAICYEEEAEKVLT
MTSPFPEIYTTDDSMFSVATATSSPSDYTEDVTTVGEVRGQLVTDEPLNITSIESLLILP
NKTEVEEEVIDVAVALPNLGYEIPKDNVTAANLSILLDEDTLNATRTEKDLNMTDITELL
RPVHPIVPPLIVDLSGSGSGSGSGSASGDPDSISGYMSGSGIPSGSISGSGQSGDGSGHL
VRLQEGADTLMWQTSASGSTLEAKEGSGSGSGVIITSGIGSGDQGSGEESGLFQEQSGAS
GLPSGLGSGISGSGTSGFFSGGESSGSGFFEVSFIDSEMIDLTARPSGEQELSGITPFGL
TDVSGSGSAIDFGSASGFGSASGFGSASGFGSASGFGSASGFGSASGFGSASGFGSAAGF
GSAAGFGSASGFGSASGFGSAAGFGSASGFGSASGFGSASGFGSASGSETSSFIPSGHPS
GEVSVHNQKHDEEIVILTDNEATELTFRSTFGPEEGRGSVEISGEGSSQEHYAEDISLSN
STLYEDYWNANETDDPLPERGEQINVTTQVFDVSDQSPPNATPPTTSVLTTSPSASLQMP
KAMEEPSVIDASANPCDPNPCGQGLCSLQDGFAVCQCHSGFSGENCSTPIQGCAEGWTEF
MGSCYIHFDERETWTNAEQHCRELNSHLVSISSQQEQEFVRNQAHDYQWIGLNDRNVKNQ
FRWTDGSPLEYENWRPNQPDNYFNTKEDCVVMIWHEDGQWNDVPCNYHLPFTCKSGPVTC
SSPPEVKNARMLGNSKDRYPVNSIVRYQCDSGFIQRHLSVVRCLPDGQWEEPQVECIGGK
TINRLRKRSLKTHPKAVNSRTWRKVL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgatttggcttctgctgtatgcatgcatccatgccatttatggcatgatattt
ttcggagacatggctgatcaggacagcaccctcagtgtgagcatccctgtggaacagcca
ttgcgccccctacttggggggagcatggtcataccctgctactttcaggacaacactgtc
caggaccctggtgccccaaccatcaccccactgtcccaccgtattaagtggagctacatc
tacaagggcaaaatatcccttattctggttgccagtgatggcatggtgcaggttgagaga
gactacttggaccgggttcatatggtaaactaccccatggtgccaactgatgctacaatt
gagatctcagaactccgctcccgtgactctggctcctaccggtgtgaggtcatgcagggc
attgaagataactatgattcggtggaaatgcaagttcaaggtattgtgtttcactatcga
gcaatttctacccgatatacattgacatttgagatggcaaaagcagcctgcatccagaac
agtgctgttattgcaactcccgcacagttgcaagctgcctacgatgatggataccatcaa
tgtgatgccggctggctttcagatcaaactgtgagatatcctattcatgagccaagggag
ccttgctatggagacaaagaaaatttcccaggggtacgaacatatggagtccgagacatc
aatgagacctatgatgtgtactgttttgcagaaaaaatgtcaggcagagttttctactcc
atgtctgtggagaagttcacctttgcagaggctgaagaccagtgtgcaaagttgggagcc
caattggccaccacggggcaactgtacctggcatggaagactggcatggatgtgtgcaac
gctggctggctagcagacaggagtgtgcggtaccccattaacatagctcgaccccagtgt
ggtggggggcttttgggagtgcgaacggtttatctgtttccaaatcagactggatatcca
tacccaacctcccgctatgatgcaatctgttatgaagaagaagcggaaaaggttttaaca
atgacctcaccatttcctgaaatatacactaccgacgattccatgttcagtgtggctaca
gccacctcaagcccatcagactatactgaagacgtgaccacagtaggggaggtccgtggg
caactggttacagatgagcctcttaacatcacaagcatagaaagcctcctaatactacct
aacaaaactgaggttgaggaggaagtcatcgacgtggccgtggctctgcctaatctagga
tacgagattcccaaggacaatgtcactgctgcaaatctgtctatactccttgatgaggat
acgttgaatgctacaaggacggagaaggatcttaacatgacggacataacagagctgctg
agacctgttcatccaattgtccctcccttgattgtggacctgtctggatctggatcagga
tctggatcaggctcagcatcaggcgatcctgattccatttctggatacatgtcagggagt
ggcatacccagtgggagcatatcaggttctggccaaagtggtgatggatcaggtcatctt
gtgagactccaagaaggtgctgatacactgatgtggcagacttctgcctcaggcagcact
ttggaggctaaagaaggtagtggcagtggtagtggtgttatcataacttcaggaatagga
tcaggggaccaaggatctggagaggagtctggactcttccaagaacaaagtggagctagt
ggccttccatcgggactcggcagtggaattagcggttcaggaacaagtggattcttcagc
ggtggggaatcgagtgggtcaggcttcttcgaggtttcatttatagactcagaaatgatt
gatctgactgcaagaccttctggagaacaggaattgtctggtattaccccatttggcttg
actgatgttagtggttctggctctgccattgactttggatctgcttctggctttggatct
gcgtctggctttggatctgcttctggctttggatctgcttctggctttggatctgcgtct
ggctttggatctgcgtctggctttggatctgcttctggctttggatctgctgctggcttt
ggatctgctgctggctttggatctgcttctggctttggatctgcttctggctttggatct
gctgctggctttggatctgcttctggctttggatctgcttctggctttggatctgcctct
ggctttggatctgcctctggctccgaaacatcaagtttcatcccttcaggtcatccctca
ggagaggtgtctgttcacaatcagaaacacgatgaagaaattgtaattctaacagacaat
gaggccactgagttgacatttaggtctacctttggacctgaagagggtcgtggatcagtg
gaaatcagtggagagggcagtagtcaagaacattatgctgaggacatatctctttccaat
agtactttatatgaagattactggaatgccaatgaaacagatgatcccctaccagaaaga
ggtgagcaaattaatgtcaccacacaagtgttcgatgtgtctgatcagtcacctccgaac
gccacaccacccaccacttctgtactcaccacttcaccttcagcttcactacaaatgcca
aaagctatggaggaaccatctgttattgatgcttctgctaacccctgtgatccaaacccc
tgtggtcaaggtttatgctctctacaagatggctttgcagtatgtcagtgtcattcagga
tttagtggggaaaactgctcaacaccgatacagggatgtgctgaggggtggactgagttt
atgggcagctgttacattcattttgatgagcgagagacctggaccaatgctgagcagcac
tgtcgagagctaaactctcacctggttagcatatcctcccaacaagaacaagagtttgta
agaaatcaagctcacgactatcaatggatcggactaaatgacaggaatgtgaaaaatcag
tttcgctggacagatggaagtcctttggaatatgaaaactggagacccaaccagccagat
aattacttcaacacaaaagaagactgtgttgtaatgatatggcatgaggatggccagtgg
aatgatgtaccctgcaactatcatcttccttttacttgcaagagtggacctgtcacatgc
tcatcacctcctgaagtgaagaatgccaggatgttaggcaacagcaaagatcgctaccct
gttaactccatcgttcgataccagtgtgacagtggattcatacagcgccacctttctgta
gtacgctgcttacctgatggtcagtgggaggagcctcaagtcgaatgcataggaggcaaa
acaatcaacaggctacggaaaagatccctcaagacacatcccaaggcagtcaatagtcgg
acgtggaggaaggtcctctaa
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