Ctenopharyngodon idella (grass carp): 127506619
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Entry
127506619 CDS
T08802
Symbol
si:dkey-219c3.2
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127506619 (si:dkey-219c3.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127506619 (si:dkey-219c3.2)
03036 Chromosome and associated proteins [BR:
cide03036
]
127506619 (si:dkey-219c3.2)
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127506619 (si:dkey-219c3.2)
Coactivators
SAGA/TFTC/STAGA complex
127506619 (si:dkey-219c3.2)
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127506619 (si:dkey-219c3.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
127506619
NCBI-ProteinID:
XP_051739130
LinkDB
All DBs
Position
24:complement(15240670..15285734)
Genome browser
AA seq
974 aa
AA seq
DB search
MMSLRFPQCLSSKTTHAPCAFLKRLSKMAGVPDPLEDMLYSEVDEKAVSDLVGSLESQLG
GQNKAVGPQGDIRRPPNALNPHLGKLLPAQVGTTLEQQRQPQRNQEGNSQENGPDRIPAS
SSVPSTSNLPSTSANLVTAANRVQYHSSNPSTCSSDAAPTDSHPNTNHIASAVRTVPARI
QTVNGSSGTLNSSVIASAPASVNGIDIGSGVGNGKSNMSAPTSTNTAFVSAQPNSTLPHA
TVSLDSQANPTIALHRPPNTITSVVHNGGDPKVSGLPMQGTGLVSTSVAFTNTEPKSDPQ
NQIKAIVPNQLPGAPVGLHPSTPTQIIVSSSAVVTSLPVASTPSVLAKPATTTLVGQPTT
LLRPGTPTQVTATAAAPQRPGAPATQLIVRPQQQTTIQLPPGFTIPPGMVLVRTEAGQLA
LVPQQVLAQAKAQNQNKATMSPRPATPTAGAAFRVTTPVAQQKTAVVTITSAQKPTTTVI
TAGARVQPAPQTVLKPSVTPQSPSTTTTSAAAPANRAPVLSQEMQENVKKCKNFLATLIK
LASHNSPSPETSRNVKALVQDLLDAKIEPEEFTNRLQTELKSSPQPYLIPFLKKSLPALR
LTLLNSQQSLTQLSQASTTSTPLTVNTIKAPAPSTLPTTISTIRPAAALTPTTTMAVKRP
GLQATPTRMPVVITQTIRAQGAVGTHLQVRNPMSVAFQASANQKQKLNDPGGGTFRDDDD
INDVASMAGVNLNEENARILATGSELVGTQIRSCKDEAFLPASLLHKRLLETAKKFGVTE
VSMETVALISHATQSRLRSMLEKVSAVAQHRADSCKDEELYEQASDVRTQLKFFEQLEKI
EKQRKDDEERELLMKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIG
PRKKRKLDSPGASAGAELPAGSSGSATGSTSSSSSSVRQTRQRITRVNLRDLIFCMEQER
TTARSMLLYKALLK
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcattacgtttcccacaatgcctcagcagcaaaacaacgcacgcgccgtgcgca
tttctcaagcgtctctcaaagatggcgggtgtccccgatccactggaagatatgctgtac
tccgaagtggacgaaaaagccgtcagtgacctcgtaggctcgttagaatcgcagttgggt
ggacaaaacaaagcggtgggtcctcaaggcgacatcaggagacccccaaacgcgctaaat
ccacacttggggaaattactgcccgcccaagtaggaacaacactggagcagcagcggcag
ccacagcgaaaccaggagggaaactctcaagaaaacggtccggataggataccggcgtcc
agttctgtcccctccacctcgaacttgcccagtacctctgcgaatttagttactgccgcg
aaccgggtgcaatatcattcatcaaatccatcaacttgttcaagtgacgcagcaccaaca
gactctcatcccaatacaaatcacattgcgtctgctgtccggacggttcccgccagaata
cagactgtgaacggaagcagtggcacgttaaactcttctgttatcgcttccgcgcctgct
tctgtaaacggtattgacattggttcaggtgtaggtaatggtaaaagcaacatgtctgct
cctactagtacaaatactgcttttgtgtccgctcagcccaacagcacactgccacatgcg
actgtgtcactagatagtcaagcaaaccccactattgcactgcacaggcctcctaacacc
atcacaagtgtcgtacacaacggaggtgaccctaaagtctcaggattgcccatgcagggc
accggtcttgtctccacctctgtggcgttcacaaacacagagcccaaatctgaccctcaa
aaccagattaaagccatcgtcccgaaccagctccccggggctcccgtaggtttgcacccc
agtacgcccactcaaattattgtgtcgtccagtgcagtggtgacctcacttcctgtggct
agcacaccctctgttcttgcaaagccagcaacaaccactctcgtaggacagcctacgacc
ctgttgagacctggtacgcccactcaagtgacggcgaccgcggcggccccgcagcgacct
ggggcacctgcgacccagctgattgtcaggccgcagcaacaaactactattcagttaccg
ccaggattcaccataccaccaggtatggtgctggtacgtacggaggctggtcagctggcg
ttggttcctcagcaggtcctggcccaggccaaagctcagaaccaaaataaagccaccatg
tcaccgagacctgctacacccactgctggagcggctttcagagtcaccacacctgttgcc
cagcagaagacagcagtggtaacaattacctcggctcagaagcccaccacaacagtcatt
acagcaggggcccgcgtgcagcctgcaccacagacagtcctcaagccctctgtgacccct
cagagtcccagcaccaccaccacctctgctgctgccccagctaacagagcccctgtcctc
tctcaggaaatgcaagagaatgtaaagaagtgcaagaacttcctagcaacgctcatcaaa
ctggcatcccataactccccctccccggaaacatctcggaatgtgaaggcactagtgcag
gatctgctggatgcaaaaattgagcctgaggagtttacaaatcgtctgcagacagagttg
aaatcatctcctcaaccatacctgatcccttttctgaagaaaagcctgcctgctctgcgt
ctgacacttctgaactcccagcagtctttaacccagctgtctcaggcctctactacatcc
accccactgacggtgaacaccattaaagctccagcaccgagcacattacccaccaccata
tctaccatccggccggctgctgccctgactcccactaccaccatggctgttaagaggcct
gggcttcaggctactccgacacggatgccggtggtgattacgcagacgattcgtgctcaa
ggtgctgttgggacacacttgcaagtgaggaaccccatgagtgtggcttttcaagcctcg
gccaatcagaaacagaagctaaatgaccctgggggtgggactttcagggatgatgacgac
atcaatgacgtggcatccatggctggtgtgaaccttaacgaggagaacgcccgtatcttg
gccacgggttcggagctggtgggcacccagatccgttcctgtaaggacgaggccttcctt
cctgccagcctgctccacaaacgtctcctggagaccgccaagaagttcggcgtgacggag
gtgtcaatggagacggtcgctctcatttctcacgccactcagtccaggctgcgctccatg
ctggagaaagtctcggccgttgcgcaacaccgcgccgactcctgcaaagatgaggagctg
tacgagcaggcgtcggatgtgcggacccagctgaagttctttgagcagctggagaagatc
gagaagcagaggaaagacgacgaggaacgggagctactaatgaaagccgcaaaaagtcgc
tcgaggcaggaggatcccgaacaggcccggcttaaacagaaagctaaagagatgcagcag
caggaactcgcccagatgagacagcgggatgccaacctcacagcccttgccgccattgga
ccccgcaagaaacgcaagcttgactctcctggggcctcagcaggtgcagagcttcctgca
ggctcctctggatcagcgaccggttctacctcatcctcctcgtcctcggttcggcagacc
cgtcagcgcatcacccgggtcaacctcagggacttgatcttctgcatggagcaggagcga
accacagccaggtccatgctgctctacaaggcccttctgaagtag
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integrated database retrieval system
