Ctenopharyngodon idella (grass carp): 127507001
Help
Entry
127507001 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127507001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127507001
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127507001
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127507001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
127507001
NCBI-ProteinID:
XP_051739792
LinkDB
All DBs
Position
24:complement(17592493..17606524)
Genome browser
AA seq
522 aa
AA seq
DB search
MFSATRKKFGEGVESDYPDESMYYQPSMFPHRSEKDMLPSPSPSSSGQLSQLGASLYGPQ
SALGFSMSNIQRMSNNNPQLNRSLTQGTQLPSHSTPTTGVPTMSLHTPPSPNRGILPMNS
RNMMSSQVGQGMGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGMG
RSQGFGMNSLSNNIFNGTDGSENVTGIDLSEFPALADRSRREGNGNPTPLHNPLAGRAPY
VGMVTKPSNEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSNLNSSGKGSSSADGPKFP
GDKTSSAQNNNQQKKGIQVLPDGKVTNIPSGMVTDQFGMIGLLTFIRAAETDPGMVHLAL
GSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGR
YGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGT
YYFFDCHNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgcaacgagaaagaagtttggtgagggggtcgagagtgactaccctgatgag
agcatgtactaccagccgtcaatgttcccgcatcgatcggagaaagacatgctgccatca
ccctcgccgtcatcgtcaggtcaattgtcacagcttggtgcgagtttgtatggtccgcaa
agtgcactaggtttctcaatgagcaacatacaacgtatgagcaacaacaatcctcaactg
aaccggagtttaacacaaggcactcagttaccgagccatagcaccccaacaacaggcgtc
ccaacaatgtccctccacacaccaccttcgccgaacaggggcatcctgcccatgaactcc
aggaacatgatgagctcgcaggtagggcagggcatgggcatgagcggcaggaccaacagc
atgggcagctctggcctgggcagcccgaaccgcagctctcccagcattatctgcatgcct
aaacagcagccagcacgccagccattcaccatcaacagtatgtcaggatttggaatgggc
cggagccaggggtttggaatgaactccttatccaataacatcttcaacgggacagatggg
agtgaaaatgtgacaggaatagacctctcagaattcccagcacttgcagacagaagtcgg
agggagggaaacggcaacccaacacctttgcataatccgctggctggaagggcaccctat
gttggaatggtcacaaagccatcgaacgaacagtcgcaggacttctcgattcacaacgaa
gacttccctgccctacccgggcccaactacaaggacccaacattgagcacggatgaaagc
aaatcaaacttgaactcctcaggcaagggcagctcaagtgcagatggacccaaatttccc
ggcgacaagacatcatcagcacagaataacaaccagcaaaagaaagggatccaggtgttg
cctgatggcaaggtaacaaacattccctcaggaatggtgacggatcagtttggaatgatt
ggactcctgacattcatccgggcagctgagacggaccctggaatggttcatctggcttta
ggaagcgacctaacaacgctaggactcaacctcaactctccagagaatctgtatcctaag
tttgcatctccctgggcttcagctccatgtcgaccacaagacattgacttccatgttcct
tcagagtacttaaccaacattcacataagggacaagctggctgcaataaaactggggcga
tatggtgaagacctgctgttctacctctactacatgaacggaggagacctcttacaactc
ctcgctgccgttgagctgttcaaccgggactggcggtaccataaagaggaaagggtttgg
attacaagagcacctggcatggagcccacgctaaagaccaacacctacgagagaggaaca
tactacttctttgattgtcataactggaggaaggtcgctaaggagtttcacctggaatac
gacaagctagaggagcggcctcacgtgccaaccaccttcaattacaatccggcccagcag
gccttctga
DBGET
integrated database retrieval system
