KEGG   Ctenopharyngodon idella (grass carp): 127507031
Entry
127507031         CDS       T08802                                 
Name
(RefSeq) protein NEDD1 isoform X1
  KO
K16547  protein NEDD1
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cide03036]
    127507031
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cide04812]
    127507031
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     127507031
   Microtubules and associated factors
    gamma-tubulin ring complex
     127507031
Cytoskeleton proteins [BR:cide04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     127507031
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd EIF3I WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th eIF2A Beta-prop_WDR75_1st PEP5_VPS11_N WD40_like Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_SPT8 PROPPIN Beta-prop_VPS8 Frtz KNTC1_N SdiA-regulated
Other DBs
NCBI-GeneID: 127507031
NCBI-ProteinID: XP_051739840
LinkDB
Position
24:complement(15763510..15773374)
AA seq 679 aa
MEDVTRLVSSGDCLKIWDSTSMTVVEQFNPHSATHPVAQVCWSSSNQYLVSASSIGDKLV
VSSLKSSPVPVMELGEGKKQTRVSLNSTSQFLVSGGLDNSVNIWDLKTKRLHRTLKDHKE
EVTCVSFNGGDSYIASGSTSGDIILHSITTNLSSKPFGHGPNVPIHDLRYSLVKRSLLGT
VSDSGSVALWDANTQKELHLFEGAHKAPCSGLAFSPANDLLFITVGLDKKIVCYDTSSKM
VFRNKQVESPLTAIDFTPDGAGLVVGSTQGRIYLYDLRNLSAPIKITTAHKTSVTCIRFQ
NSTSKLKSTKTSSKTSQSNKRVSVKLSGQQTGPSTPTSTVPPSVPGSEFPGDGQAQVTGT
AGEVFSREAEGQHSQDQLPNVEKFSSIGRNSLNLDIFSPLNDGFKAHGFGDTPTSRNGGS
IDVFSREAEGQHNTDRFRVGRNSLDIFSPVRDDYKGHRLSDVSSGKKDFEYLPHFPGGSS
QRKTPLGTPGSRCYSPSVVQTPPPIKEEEPITTPPQQTDVQNGTKVEKNNGLRQEYDAIT
TPPAAQSTRVQSTQPFNTPEASQRRDLPTQLTYDSPVNRAPPAAAPALAAAVESGAEGRG
APLTSVQMNFVRNMIHEALEDFRDTCHRDIINLQVEMVRQFYIQLNEIHGLIEKYSVNDS
LVEEIERLREENKRLRANY
NT seq 2040 nt   +upstreamnt  +downstreamnt
atggaggacgtcacgcggctggtgtcgtcaggtgactgtctgaagatttgggactcgacc
tccatgacggtggtggagcagttcaaccctcacagtgccacacatccagtggctcaagtg
tgctggagcagcagcaatcagtacctggtcagtgccagcagtataggggacaagctggtg
gtttccagtctcaagtcgtcaccggttccagtgatggagctgggtgaagggaaaaaacaa
acccgtgtcagtctgaactccacatcacagttcctggtcagtggaggactggataacagt
gtcaatatctgggacctcaagacaaaaaggttgcaccgaacccttaaggaccacaaggag
gaagtgacgtgtgtgtcttttaatggcggcgatagctacatagcatcaggctccactagt
ggagatatcatcctccacagtatcacaaccaacctgtccagcaaacccttcggccatggg
ccaaatgtgccaatccatgatctgaggtactcgctggtgaagaggtctttgctgggcact
gtatctgacagtggctctgtggcactctgggacgctaacactcaaaaggagctgcacttg
ttcgagggggcgcacaaagccccatgttcagggttggccttctccccagccaatgatttg
ctcttcattactgtggggcttgataagaagatcgtctgctatgacacctccagcaaaatg
gtgtttcgtaataagcaggtggagtctccactcacagccattgattttaccccagatggg
gctggactggttgtgggctcaacgcagggcaggatctacctgtacgatctgagaaacctc
agtgcgccgatcaaaatcaccacggctcacaagacgtcagtgacatgcattcgcttccag
aactccacctccaagttaaagtccactaaaacatccagcaagacatctcaatcaaataag
cgggtttcagtaaaactgagtggtcagcagacgggaccttccactccaacatctacagtc
ccacccagtgtgcctggctctgaatttcctggagatggccaagcccaagtcacaggcact
gcaggtgaggtgttctcccgagaggcagagggacaacacagtcaagatcaactgcccaat
gtggagaaatttagcagcataggtcggaacagcctaaacctggatattttctccccactt
aatgacggattcaaagcacatggttttggtgatactccaacttcaagaaatggaggcagt
atagacgtgttctcgagggaagcagaaggccagcacaacacagaccggttcagagtcggc
agaaacagcttggacatcttttcacctgtacgagacgattacaaaggacatagactgagt
gatgtatcaagtggaaagaaagactttgaatacctacctcatttccctggtgggtcgtcc
cagaggaagaccccattgggtactccaggcagtcgctgctacagcccatctgtggttcag
actcctccaccaatcaaagaggaggagcccatcactaccccaccacaacagactgatgta
caaaatggcaccaaggttgagaagaataacggcctccgccaggagtatgatgccataacc
acgccacctgctgctcagagcacacgcgttcagtccacgcagccattcaacacacctgag
gccagtcagaggagagatctgcccacccagctcacctatgattcgcctgtcaacagagct
cctcctgcagctgcacccgctttagcagcagcagtcgaatctggagccgagggccgtgga
gctccactcacctccgttcagatgaactttgtccgtaacatgatccatgaggcactggag
gactttagggacacctgtcatagagacatcatcaatctacaggtggagatggttcgccag
ttctatattcagctgaatgaaatccacggtctgattgagaagtactcagtgaatgactcg
ctcgtggaggagatagaaagactgagagaggaaaacaaacgactgcgagccaattattaa

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