Ctenopharyngodon idella (grass carp): 127507139
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Entry
127507139 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127507139
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127507139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
127507139
NCBI-ProteinID:
XP_051740040
LinkDB
All DBs
Position
24:2267733..2304268
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AA seq
1032 aa
AA seq
DB search
MSDFETRKRKRSSSPDLSCVSLKSNQSMGHPPEFSDGPVTSDPRDDQTGDQDSPQAVDDE
LQRVKDQLKTSMKNKYERLSEGLKLQENETLLNRIYTQLYIIEGESEGVNEQHEVLQMEK
TARTQHSQDTPIYCNDIFKASPEPGCEEKHQIKTVLTKGIAGIGKTVSVQKFILDWAEGK
DNQDVDFMLVLPFRELNLIRDHQYSLHRLLLDFHPELQDLDSKIYEECKVVFIFDGLDES
RITLMFSDAQKVSDVTETSSVGVLMSKLMTGELLPSALIWITSRPAAANQIPSKYINRLT
EIQGFNEPQKEEYFRKRISDEHQASRIISHIRRARSLHIMCHIPVFCWISSTVLQKLLKE
DLSAEIPQTLTEMYIHFLLIQINMRNQKYEERDPEKLLQSNREVIVKLAEVAFKQLMKGN
VMFYEEDLRESGIDVTDASVYSGICTEIFKEESVIHQRKVYSFIHLSFQEFLAAFYVFYS
YVIKNNKTLDEFSLYRSDKDSLYDEDPLYDLLTSAVDKALWSENGQLDLFLRFLLGVSLE
SNQRLLQDLLTHTENSSESIRRITQYIKKKIKGEDRLSTERSINLFLCLLEVKDQSLSRE
IQEFVKSDKHSEEKLSPSYCSTISYMIQMSEEPLDEMNLMKCNTSDEGRRRLIPAVINCR
KALFSGCNLSDQDCEIVSSALQSSNSVLRELDLSNNDLQDSGVNFISDGLKSPNCQLQIL
RLALCNLTAQHCEIVSSALQSSNSVLRELDLSNNDLQDSGVSFISDGLKSPNCQLQILRL
SGCMVTEEGCGYVSSALSSNPSHLRELHLSYNHPGQSGVQLLNHKLEDPNYKLQILNVDH
GGEVMMTAGLRKYACDLTLDPNTAHTRLVLSDGNRKVTSVEERQPYPDHPERFDEFPHVL
CRERLTGRCYWEAEWSGDGAVISVTYKEISRKGGSDDCEFGFNDKSWSLLCSDGGFSVYH
NNNYTDTPAVRSSSKRAGVYVDVSAGTLSFYSVSHTHTLTHLHTLNTTFTEPLCAGFTVY
NSSSVSLCDIKG
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttgagacgaggaagaggaagagatcttcatctccagatctcagctgtgtg
tctctgaagagcaatcaatccatgggtcatcctcctgaattcagtgatggaccagtgacc
tctgaccccagagatgatcagactggagaccaggattctcctcaagcagtagatgatgaa
ctacagagagtcaaagaccagctcaaaaccagcatgaagaacaagtatgagagattatct
gagggactgaaactccaggagaatgaaaccctcctgaacaggatctacacacagctctac
atcatagagggagagagtgaaggagtgaatgaacaacatgaggttttacagatggagaaa
acagccagaacacaacactcacaagacactccaatctactgcaatgacatctttaaagcc
tcacctgaaccaggatgtgaggagaaacaccagatcaagactgttcttactaaaggcatc
gctggaatcggaaaaaccgtctctgtgcagaagttcattctggactgggccgagggaaaa
gacaatcaggatgtagacttcatgttggtgcttccatttcgagagctgaacttgatccga
gatcatcagtacagtcttcacagacttctgctggactttcatcctgaacttcaagatctg
gactcaaagatttatgaggagtgtaaagttgtgttcatctttgatggtctggatgaaagc
agaatcacactgatgttttcagatgctcagaaagtttctgatgtgactgagacttcatca
gtgggtgtgttgatgtcaaagctcatgacaggagagctgcttccctctgctctcatctgg
atcacctccagaccagcagcagccaatcagatcccctccaaatacatcaaccgtctgaca
gagattcagggattcaatgagcctcagaaggaggaatatttcaggaagagaatcagtgac
gagcatcaagccagcagaatcatctcacacatcagaagagcaagaagcctccacatcatg
tgccacatacccgtcttctgctggatctcatccactgtgcttcagaagctcctgaaagaa
gatctgagtgcagaaatccctcaaactctgactgaaatgtacatccacttcctgctgatt
cagatcaacatgaggaatcagaagtatgaagagagagatccagagaaactgctgcagtcc
aacagagaagtgattgtgaaacttgctgaagtggctttcaaacagctgatgaagggcaat
gtgatgttctatgaggaggacctgagagagagcggcatagacgtcactgacgcctcagtg
tattctgggatttgcactgagatctttaaggaggaatctgtgattcatcagaggaaagtc
tacagcttcattcatctgagctttcaggagtttctcgctgctttctatgtgttttattca
tatgtgatcaagaacaacaaaacactggatgaattcagtttgtacagatctgataaagac
tctctgtatgatgaagaccctctgtatgatctactaacatcagcagtagataaagccctc
tggagtgagaatggacagctggatctgttcctgcggttcctgctgggcgtctcactggag
tccaatcagaggctcttacaggatctactgacacacacagagaacagctcagagagcatc
aggagaatcacacagtacattaaaaagaagatcaaaggtgaagatagactctccactgaa
agatccatcaatctgttcctctgtctgctggaagtcaaagatcagtctctgtccagagag
attcaggagtttgtgaaatcagacaaacactcagaggagaaactctctccgtcttactgc
tcaacaatctcctacatgattcagatgtcagaggagccactggatgagatgaacctcatg
aaatgcaacacatcagatgaggggagaagaagactgataccagctgtgatcaactgcaga
aaagctctattttctggctgtaatctctcagatcaggattgtgaaattgtgtcttcagct
ctacaatcctcaaactctgtcctgagagagctggatctgagtaacaatgacctacaggac
tctggtgtcaacttcatttctgatggactgaagagtccaaactgtcagctgcagatactg
agacttgctctctgtaatctcactgctcagcattgtgaaattgtgtcatcagctctacaa
tcctcaaactctgtcctgagagagctggatctgagtaacaatgatctacaggactctggt
gtcagcttcatttctgatggactgaagagtccaaactgtcagctgcagatactgaggttg
tctggctgtatggtgacagaggaaggctgtggttatgtgtcttcagctctgagttcaaac
ccctcacacctgagagagctgcatctgagctacaatcacccaggacaatcaggagtgcag
ctgctcaaccacaaactggaggatccaaactataaactgcagatactcaatgtggatcat
ggaggagaggtcatgatgacagcaggactacgaaagtatgcctgtgatctcacactggat
ccaaacacagcacacactcgactcgttctgtctgatgggaacaggaaggtgacgagtgta
gaagagcgtcagccgtatcctgatcatccagagagatttgatgagtttcctcatgttctg
tgtagagagagactgactggacgctgttactgggaggctgaatggagcggagatggtgct
gtaatatcagtgacatataaagaaatcagcaggaaaggagggagtgatgactgtgagttt
ggattcaatgacaaatcctggagtctgctctgctctgatggaggattctctgtctatcac
aataataactacactgatacacctgctgtccgttcatcctctaagagagcaggagtgtat
gtggacgtgtcggccggcactctgtccttctacagcgtctctcacacacacacactcaca
cacttacacacactcaacaccacattcactgaacccctctgtgctggatttactgtttat
aattcctcctcagtgtctctgtgtgatattaaaggatag
DBGET
integrated database retrieval system
