Ctenopharyngodon idella (grass carp): 127507142
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Entry
127507142 CDS
T08802
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127507142
Pattern recognition receptors [BR:
cide04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127507142
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_5
LRR_9
LRR_1
LRR_EndoS
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
127507142
NCBI-ProteinID:
XP_051740044
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Position
24:complement(2123507..2127482)
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AA seq
796 aa
AA seq
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MFQNLRNLTVLHLNDNLIANINISAFSPLISLRKVNLSRNHLNQISKVQPLFLLPQLQEV
HIGSNNFTSFQTSEVSNISLRLKVLDLFQNPLKVFSVTADIFPHLDNLVLAFIAENMTWD
VQDKRYLQSVRFLNLSGIQLPVEKITDLLQTFNSSLASLRLHSLGDVKVKALMRNVCLIS
SLKFLGLQGNNITSISKDEMQFCTQLTQLDLSNNRLNSVPSVISSLPGLQFLDLTFNHIK
SISRVDFANLTQLRTLQMYSNYISFIEDFAFKDLKSLKTLMIGSNRLVLNGYFKKDLQKL
TILDLANNKLDSVHRGDFESLKSLKNLSLPDNQISFIEAGSFDGLTNLIFLNLQSNKLSR
GSIKDSVFSRLPNLKTLLLNNNYISYDNQKALDYPPFQNLRKLKTLNIFSQGHKGMRYLP
SNLFKGLSSLEDLQAENLNINSLDPDTFTYTPYLWVLDLSRNELLSLTTRLFLPLRVLKT
LHLSKVGLQSLDFLINANLSKLHLLHVSTNALSVINETLIQSLPTLIYLDLRENYLSCDC
TNAWFVNWTISSNDTEVESAYELTCNYPDKIKGHKLLDLDVDSCNVDVGFFCFISTATLV
SMTLLGSFLFHFLRWQVVYAYYLLLAFLHDNKQQRKPNGLQYDAFISYNVHDELWVMREL
LPQLEGEQGWKLCLHHRDFEPGKPIMDNIVNGIYSSRKTICVISHHYLESEWCSREIQVA
SFRLFDEKKDVLILVFLEHIPSHQLSPYYRMKRLIQKKTYLRWPKPGEDTRVFWQKLRVA
LENKDASEMEHPLAGI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaatctgagaaatctcactgtgttgcatctaaatgacaacttgatcgcaaat
atcaacatctctgcattttcacccctgatcagtttaagaaaagtaaatctgtccagaaat
catctgaaccaaataagcaaagttcagccgctctttttattaccacaattacaggaagtg
cacattgggagcaataacttcacctcttttcagacctcggaggtgtccaacatatctttg
agactgaaagtcctggatttatttcagaatcctttgaaagtgttcagtgtcactgcagat
attttccctcacctggataatttggtcttggcttttattgctgaaaacatgacatgggat
gtgcaggacaaaaggtatcttcaaagtgtgcgatttctaaatctaagtggaatacagttg
ccagtggagaagatcacagatctcctgcaaaccttcaactcttctttggccagcctgagg
ctacactctctaggggatgtaaaggtcaaagctttgatgaggaacgtctgtctgatttct
tctctgaaatttctgggcttgcaggggaacaacattacatccatatcaaaagatgagatg
cagttctgcacacagttaacccagctggatctgtccaacaacagactgaacagcgttcct
tctgtcatcagcagcctgccaggtcttcagtttttggacctcaccttcaaccatataaag
agcataagtcgtgttgattttgccaacttaacccaattacgaacccttcagatgtacagt
aattatatatcttttattgaggactttgcttttaaagatctgaaaagcttaaaaacttta
atgattggatctaacagactcgttctcaacggatattttaaaaaagatcttcaaaaactt
acgattttggatctagcaaataacaagctggactcggtccataggggagattttgagtcc
ttaaaatcactgaagaatttgtctcttccagacaatcaaatctcatttattgaagcgggg
tccttcgatggattgacaaatttaattttcctgaatttgcaatcaaacaagctctctcgg
ggttcgataaaagactctgtgttctccagactcccaaacctgaaaacccttctgttgaac
aataactatatttcatacgacaaccagaaggctcttgattatccaccctttcaaaatctg
agaaagctaaagactctgaacatttttagccaaggtcataaaggaatgcgttatctgccc
tcaaaccttttcaagggactgtcgtctttggaagaccttcaagcagagaatctcaatata
aattctttagatccagacacattcacttacactccttatctgtgggtactggatctcagc
aggaatgaactcctttcactcactacgagattatttctgcccctccgggtcctcaagaca
ctccacctgtccaaagttggcttacaatctttggactttctcattaatgcaaatctcagt
aaactgcatctgttgcatgtaagcacaaatgccttatcagtcattaatgagaccttgatc
cagtctctgccgacactgatttaccttgatctacgagaaaattatctctcatgtgactgt
accaatgcctggttcgtcaactggaccatcagtagcaatgacacagaagtcgagagtgct
tatgaactcacgtgcaattacccagacaaaatcaaaggacataaactcctggatcttgat
gtagattcatgtaacgtagatgtggggttcttctgtttcatttccacagccacactagtg
tcaatgacccttctcggctcttttctctttcacttcctcagatggcaggttgtttatgca
tactaccttctccttgcttttctccatgataacaaacagcagagaaagcccaacggtctg
cagtatgatgcttttatttcctataatgttcatgatgaattgtgggtaatgagggaactg
ttgcctcagttggaaggtgagcagggctggaagttgtgtctgcatcacagggactttgaa
ccaggcaaacctatcatggataatattgttaatggcatttatagtagtcgcaaaaccatc
tgtgtgattagccatcactacttggaaagtgagtggtgttcccgagagatccaggttgct
agtttccgtctctttgatgagaaaaaagacgttctcatcctggtgttcctggagcatatt
cccagtcatcagctgtctccgtactacagaatgaagagactaatccagaagaagacctat
ctccgctggcctaaacccggagaggacaccagggtcttctggcagaaactcagagtcgct
ctggaaaacaaagacgcctcagaaatggagcatccattggctgggatttag
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