Ctenopharyngodon idella (grass carp): 127507298
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Entry
127507298 CDS
T08802
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127507298
Transcription factors [BR:
cide03000
]
Eukaryotic type
Other basic domains
RF-X
127507298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
127507298
NCBI-ProteinID:
XP_051740247
LinkDB
All DBs
Position
24:4596513..4609991
Genome browser
AA seq
1533 aa
AA seq
DB search
MNLTVMADDQQQQPGAPGPSLQSLEATALQYNKIKNSICKSVQSKVESILQDVEKFTDIE
KLYLYLKLPSGPSSGNDKRTENQRGSASPALCDQNSMSSSRTQQMYAFNWIRNHLEEHPE
TSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRK
KAFVHMPSLPNLDLHKSGDGCELLESAGQSPSAEDEMRSAACGLVCEWAQKVLSRQFDSV
EELARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTGEANSFQPQVKTLPSPS
VDAKQQLQRKIQKKQQEQKLTSPLPTDAQARRAEAGTPVPGSSLTSGSPALLSPQPTIGI
VVAAVPSPITVQRNRQLMTSPSPVGAAEGKVVPVNFQVVTQQVKQSPKAPQNIPASPVGD
RLARHRYAQILPKPSATSAIALRSPPTLLITNSPIKTVMPTPHVSSVNVVKMTAISLAPN
SSSNSSTPTPLRPASAGISSTASQEESNQTQQAQNGTSTSSLQSSGLGKAGRPSTTPTPL
ASTITNEVKVTFEAVNDSNSAIAVDKQSTASGASTGQKNERATKFRASSEPSLLIKASPV
PERVIRAKSDSTTPSSTIMEALAPSSNNNNDQPESTLYLTVTSQNVDAELSSICAVATAS
TSSKDAGLCLKSPRKRSASVLETHTIPVKRVFISQQPLDVSSNARPGLVIAAKKIQRPGT
PARPESAPCKVTLKQSSSLPTQILALSDTPIGISHTVNHPRVENEVVNISPNETASGTST
ALLQQSHQQISSGVSQEVSAVSELKSSLQDYSQQMQAEHKQNAANPLPLMAQATETSSQL
SLQQDIVDFAGAQASIDYFPFNDDDMTQDSIVEELVQMEEQMKLNSSLQSYLSCVDISLQ
GQGTVGQGTILSPHQTSTQFYHSSHSSATPVHTPTPTPTPTPTPTPTPTSEMLPGGHSLT
RESPCSRMAPITPVDSILGGRHTPISTPLSNCSSSVPPSPIECRNPFAFTPINSSITGYH
DGSVVSSSPVKPMQRPMATHPDKAKLEWITNRYNSTAGSPVISTNSTIGILPSYQDLVED
HFRKPHAFAIPGQTLQSQSRHQDGNLGRLTTVSPVQQGQQTTLSSKQESFAVPAPLDNKG
AGSTSASGGGTFRCRSVSPAVRQRNLSGTTAQTVTTPRSVVSPFNCPLTSEVLNILSNNQ
SVVNASTLAQRSQSVPLNIMMQSELLPVSHQAQQSNSAKITTVLLSKMDTDGDDAVRGLG
VNNLPANYTARMNLTQILETTQGYPGGPNPQNQQLPLDSSPSPFDFQKTGYLISTGEEQV
TFTSGDSQAQSGPGLQQPEEQLELQEPTLELQDQHLQLQNQQLQLPDQQLQLQDQQLQLQ
DQQLQLSDQQQLQDDPDLTQQHLLPQTSQRVVDHDQQEQLDFNTTVKDLLGEDSLNPSSQ
LVGQVASELSAVASDFSSDIRLTSDLSSSINDLNTLDPNLLFDPSQQQDQYEDATLEELK
NDPLFQQICSDTVNSAGFDWLENKDQPTVEMLG
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaccgtgatggctgatgatcaacaacaacagcccggtgctcccggaccgtcc
ctgcagagcctcgaggcgacggcgctgcagtacaacaagatcaagaattccatttgcaaa
tctgtacaatcaaaagtggagagtatattgcaagatgttgagaagtttacagatatcgaa
aagctctacctctaccttaagttgccttctggtcccagtagtggcaatgacaaaagaact
gaaaatcagaggggctctgcaagtcctgcattatgtgaccagaattccatgtcatccagc
cggactcaacagatgtacgcgttcaactggatccgaaatcacttggaagagcacccagaa
acctcactgccaaaacaagaggtgtatgacgaatacaagagttattgcgacaatctgggt
taccatcctttaagtgcagctgatttcggaaagatcatgaaaaacgtttttccgaacatg
aaggcacgtcgtttgggcatgagggggaaatcaaagtactgctacagtggtctgcgaaaa
aaagcatttgtgcacatgccatcactccctaacttggacttacacaaatcaggagatggg
tgtgagttgttggagtcggccggacagtctcccagtgccgaagacgagatgcgttctgca
gcctgtggtctggtctgcgaatgggctcagaaggttttgagtcgccagtttgacagtgtg
gaggaactggcacgctttcttcttaacagtcactatataggcactaagtccatggcagct
cttactgttatgactggaactccaacaggtatgaaaacccctacgccggcctctgcgttt
gtgccaactggtgaagccaactcattccagccccaagtgaagaccctcccttctccttct
gtagacgccaaacagcagttgcagcggaagatccagaagaaacagcaggagcagaagctc
acctctcctttgcccaccgatgcccaggctagaagggcagaggcgggcacacctgtccct
ggatccagcctgacctctggaagtcctgcattgctgtcccctcaaccaaccataggcatt
gtggtcgctgctgttccaagtcctatcacagttcagagaaacaggcaactaatgacctct
ccgagtcctgttggagcagcagagggaaaagttgtaccggtgaacttccaggtcgtgaca
caacaagttaagcagtctccaaaagcaccccagaatatccctgccagcccagtcggtgac
aggttggccagacacagatatgcccagattttacctaaaccttccgccacaagcgccatt
gcacttcgctcacccccaacactcctcatcaccaacagccccatcaagacagtgatgccc
acgccccatgttagctctgtaaatgtggtcaagatgactgcaatatctctagcacccaac
agtagcagtaatagtagtactcctaccccgttgcgacctgcgtcggcaggcatcagtagc
acagcttcccaggaagaatctaaccaaacccagcaagctcagaatgggacgtctaccagc
tctcttcagtcatctggacttgggaaagctggacgtccttccacgaccccaaccccgcta
gcatccaccattaccaatgaggtgaaggtgacatttgaagctgtgaatgacagtaactca
gctattgctgttgataaacaaagcactgcatcaggggcaagtacaggacaaaagaatgaa
agagccactaaattcagggcttccagtgaaccctctctgcttattaaggcatcccctgtg
cctgagagagtgataagggccaagagtgactccacaaccccttcaagtacaatcatggag
gctcttgccccaagcagcaataacaacaatgatcaaccagaaagtactttgtatttaact
gttactagccagaatgtagatgccgaattgtcatccatttgtgcggtggcaactgcaagc
acttcttctaaagatgctggtctctgtctaaaaagccctcgaaaacgttctgcatctgtt
ttagaaacccataccatcccagttaaaagagtattcatttcccagcaacctttggatgtt
agcagcaatgccaggcctggtcttgtaatagcagcgaagaagatccagagacctggcacc
ccagcaagaccagagagcgctccatgcaaagttacactaaaacagagtagctctcttcca
actcaaatcttagctctttcggacactccaattgggatctctcacactgttaatcatcct
cgagtcgagaatgaagttgttaatatcagcccgaacgaaacagcttctggtactagcaca
gctttattgcagcaaagtcaccaacaaatcagcagtggtgtttctcaggaggtatctgct
gttagtgagctcaagagctcgctgcaagactactcgcaacaaatgcaagcagaacacaag
cagaatgcagctaatccgttaccgttgatggcccaggcaactgagacctccagtcagctc
tctcttcagcaggacattgttgattttgcaggagcccaagctagcattgactatttcccc
ttcaatgatgatgatatgacccaggatagtattgtagaagagctcgtacaaatggaggag
caaatgaagctgaatagcagcttgcaatcctacctaagttgtgtggatatatccctacaa
ggtcaaggcacagttggccaaggaacgatcctgtcaccccatcagacaagtacacagttc
tatcattcctctcacagtagtgccacaccagtccatacaccaactccgacgcctacgccg
acaccaacgcctactccaactcctacctctgagatgctaccaggggggcatagcttgacc
agagaaagcccttgttcccgaatggcacctattaccccagtggatagcatcttaggtggt
cgccatacacccatcagcactccactgtcaaactgcagcagcagtgttcctccgagtccc
attgaatgccgcaatccctttgcattcactcctatcaactccagtataactggttatcat
gatggtagtgttgtgtccagcagtccagtgaaacccatgcagaggcccatggccacccac
ccagataaagccaagctggagtggatcaccaataggtacaacagcaccgcagggtctcct
gttatctccaccaactccaccattggcatcctgcccagttaccaggatctggtcgaggac
cacttccgtaaaccacacgcctttgccatccctggccaaactctccagtctcagtcaagg
catcaggatggaaacttgggaaggttaacaaccgtttctccagtgcaacaaggacagcaa
accacccttagtagcaagcaagaaagttttgctgtccccgctccgttggacaacaaaggg
gcaggaagcacatctgcatctggaggtggaaccttccggtgtcgcagcgttagcccggca
gttcgccagcgtaacctcagtggcaccactgcacaaacagtcaccaccccacgctctgtt
gtttctccctttaattgccccctgacatctgaggtcctgaacattctgtccaacaaccag
tctgtggtcaatgccagcaccttggcccagaggagccaatcagtgccactaaacatcatg
atgcagtctgagctgctgcccgtcagtcaccaggcgcagcaaagcaatagcgccaagatc
accaccgtgctcctcagcaagatggacacggacggagacgatgcagtgcgagggcttggt
gtaaataacctgcccgccaattacacagcacggatgaacttgacccaaatcttggagacg
acacagggctaccccggaggccccaaccctcagaaccagcagctgcctctggactcaagc
ccttcgccatttgacttccagaagacgggttacctcataagcacgggggaggaacaagtc
accttcacgagtggtgatagtcaagcacaatcaggccctggactgcaacaaccggaagag
cagcttgagctccaagaaccgacattggagctgcaagatcaacatctacaactccagaat
caacagctgcaacttccagatcagcaattacaactccaagaccaacagctgcaactccag
gaccaacagttgcagttgtcggaccaacaacagttacaagatgatccagaccttacccag
cagcacttgttgccccaaacctcacagcgggttgtggatcacgatcagcaagagcaactg
gacttcaacactaccgtcaaggatctcttgggggaggacagcctcaaccccagttcgcaa
cttgtcggacaggtggcgtcagaactcagtgctgtcgcctctgacttttccagcgacatc
cggttgacttctgacctttctagtagcattaatgacctgaacactttggaccccaacttg
ctgtttgaccctagtcagcagcaggaccaatatgaagatgccacactggaagaactgaag
aacgatcctctttttcagcagatttgcagtgatactgtgaactctgctggttttgattgg
ctggagaataaagaccagccaaccgtggaaatgttgggataa
DBGET
integrated database retrieval system