Ctenopharyngodon idella (grass carp): 127507404
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Entry
127507404 CDS
T08802
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04110
Cell cycle
cide04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127507404
04114 Oocyte meiosis
127507404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127507404
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
127507404
Meiosis-specific proteins
Cohesin complex and associated proteins
127507404
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
127507404
NCBI-ProteinID:
XP_051740444
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Position
24:12780379..12797249
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AA seq
1234 aa
AA seq
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MGFLKQLDVENFKSWRGKQTIGPFKRFNCIIGTNGSGKSNVMDALGFVMGERAVNLRVKH
TRDLIHGAHIGKPVSTSASVTMIYCGDNNEEMTFSRCISGESSEYRVNGKQMTLAKYTGE
LEKIGIVVKAKNCLVYQGAVESIAMMNAKERTKMFERISGSGELSAEYDAKLAVLQKAKE
DTQFHFNRKKAATAEKKQVFKDKTEAEKYQALLDELRESKLQLTLFQLFHNEKNIDSQSD
SLRDVQEAAAQQKNSLDVWEQTVKARKKEHGRLNRELQQLEKEIRSQEQILNQQRPQYIK
AKVNTSHHEYKVEEARRSLQKNQSQQAKKEQELEELKRELTELEKAWKASERQMEEEEAQ
RGAGVQLEEAQLERYKELKELARKKGAILNQSAEKLHWEVKADREKLQFDLRRKSEIQAN
IKHSQTRLEDFSRRAEKLEEYANTTKKALEEQHQQEKQLAEELSTGFIRMEEVNKELAQV
LIKLQNARLDSQENRRQQKRDEVLESLRRLYPDTVYGRLVDLCQPIHKKYQIAVTKLFGK
NMNAIVVTSATVAHDCIRFLKEERAEPEMFLPIDYIDVHPLNERLREVQGAKMVVDVVQC
SQNAPQLKRVIQYVCGNSLVCETLKDARRIAFDGPERLQTVALDGSLFRKSGVISGGSLD
LSKKARRWDEKDMNKLKEEKDKLSSELRALMKLKRKEVDLMQIRAQSQGNQTRLKYSNSE
LDSIRKKSIPACQAEISKLRSELSNLEAQIEIQTESVELKDNEMKAVRDKIHQMEDVVFA
DFCAEIGVANIREYEQDYLRVQQELEKKRLQFESQHTRLSTQLEYEQAQLEKLVKQMKKI
EETIEKEDNVVISLKEMEDRLLIAVEQTQSNLLELNNQLSKKTTLVNDAKTELDKTLKGL
QERNRVLVKLQKETICAEAALEQLRLSRHNLLLGCKIDCLPLTLISGALDDISDIQLDSE
SQSISTLDIYEREAQMVFDYSTLDMGLKALTEESELEAQLEKLKEDVSSLESMIMMSRAP
NLKALEKIREVKDSYREVMDAFETSTHTTKKCSQEFEQVKAKRFHLFSQCFERVSIVIDQ
IYKNLCRNASAQAILSAENPNEPYLDGINYNCVAPGKRFMAMDNLSGGEKAIAALALVFA
IHSFRPAPFFVLDEVDAALDNTNIGKVTGFFRMMSRESCQIIVISLKEEFYSRADALLGV
YSMFDECMFSRLLTLDLTPYPLNDENGTDREMDK
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcttaaaacaattagacgttgaaaatttcaaatcctggcgaggaaagcaaact
atcggcccatttaaaaggtttaattgcataattggcactaatggatcaggcaaatctaat
gtcatggatgctcttggattcgtgatgggagagagggctgtaaacctccgtgtcaagcac
accagagatctcatccacggtgcccacatcggcaaacccgtgtccacctccgccagcgtg
accatgatctactgtggagacaataatgaggaaatgacgttcagtagatgcatttcaggg
gaatcttctgagtatcgagtgaatggtaaacagatgactttggcgaagtacactggagag
ctggagaagatcggcattgtggtgaaagcgaagaattgtctggtctatcagggtgctgtg
gagtcaattgccatgatgaatgccaaagaacgaacaaagatgtttgaacgaatcagtggc
tccggagagctgagcgctgaatatgatgccaagctggcggtcctgcagaaagccaaagag
gacacccagttccactttaaccgcaaaaaagcggctacagctgagaagaaacaagtcttc
aaagataagactgaggcggaaaaatatcaggcgctgttggacgaactcagagaaagcaag
ctccagctgactctctttcagctcttccacaatgagaaaaacatagattcacagtcagat
tcactgagggatgtacaggaggccgcagcgcagcagaagaacagcctggacgtctgggaa
caaactgtgaaggctcggaagaaagaacatgggcgcctgaaccgggaacttcagcagttg
gagaaggagatcagatctcaagagcagattcttaatcagcagaggcctcagtacatcaaa
gctaaagtgaacacttcccatcatgagtacaaagtggaggaggcacgcagatcgcttcag
aagaaccagagtcagcaggccaaaaaggaacaggagctggaggagctaaagagagagctg
actgagctggagaaggcctggaaggcctctgagaggcagatggaggaggaggaggctcaa
agaggagccggagtgcaactagaggaggcccagttggagcggtataaagaactcaaagag
ctggccaggaaaaagggagccattttaaaccaaagcgcagagaagctgcactgggaagta
aaagcagaccgtgaaaagctccagtttgacctgaggaggaaaagtgagatacaggcaaat
attaaacattctcaaactcggttggaagatttcagcagaagggcagagaagctggaggag
tatgccaacactactaagaaagctctggaggagcagcatcagcaggagaagcagctggca
gaggagctgtcgacaggcttcatacgaatggaggaggtgaacaaggagctggcgcaggtg
ctgatcaagctgcagaacgctcgcctggacagccaagagaatcgacgacagcagaaacga
gatgaagtccttgaaagcctcaggagactctaccctgatacagtgtatggccgtctggtg
gacttgtgccagcccatccacaagaaataccagatcgccgtcaccaagctgtttggcaag
aacatgaatgcaattgttgtgacgtctgccacagtggctcatgactgcatccgatttctg
aaagaggaaagagccgaaccagagatgtttcttcctattgactatatagatgtacatcct
ctgaacgagcgtctgagggaagtgcagggagccaagatggtggtggatgtggttcagtgc
tctcaaaacgcccctcagcttaagagggtgattcagtatgtgtgcggaaactccctggtc
tgcgagactctgaaagacgcccgtcgcattgccttcgatggccctgagcgccttcagacg
gtggctcttgatggctccttgtttcgcaagtctggggtgatctctggaggctcgttggac
ctgagcaagaaagctcgacgctgggatgagaaggacatgaataaactgaaggaggagaag
gataagctgtcatctgagctgcgtgccctgatgaagctgaagcgtaaggaagtggatttg
atgcagatcagggctcagtctcaaggaaaccagactcgtctcaaatactccaactcagaa
ctggactccattcgcaagaagagcatcccagcttgtcaggctgagatttccaaactcagg
agtgagctctccaacctcgaggcccagattgagatacagaccgagagtgtagaactaaag
gataacgagatgaaggctgtcagggacaaaattcatcagatggaggacgtggtgtttgca
gacttctgcgcagagattggtgtggctaacatccgtgagtatgagcaggattatctgcga
gtgcagcaggagcttgagaagaagcgcctacagtttgagtcccagcatacccggctaagt
acccagctagagtatgaacaggcacagttggagaaactcgtcaaacagatgaagaagata
gaagagaccatcgaaaaagaggataacgtcgttattagcttgaaagagatggaggacaga
cttttgatagctgtggagcagacacaatcaaatctcctagaactgaacaaccagctgtca
aaaaagacaactttagttaacgatgccaagacagagcttgacaagactcttaaaggcctt
caggagagaaacagggtgctggtgaagcttcagaaggaaacaatctgcgctgaggcagcc
ctagaacagctgagactgagcagacacaacctgctgctgggctgtaagatagactgccta
ccgttgacactgatttcaggagcgctggatgacatcagtgacatacagctggactcagag
tctcagagcatcagcacactggatatttatgaacgagaggcgcagatggtgtttgactat
tcgacactggacatgggccttaaggccctcactgaggagagtgaattggaggctcagttg
gagaagctcaaagaggacgtctcctctctggagtccatgatcatgatgtccagagctccc
aacctgaaagctctagaaaagatcagagaggtcaaggacagctaccgggaagtaatggat
gcgtttgagaccagcacacacaccactaagaaatgcagtcaggagtttgagcaagtgaag
gccaaacgcttccatctgtttagtcagtgctttgaacgcgtgtctatcgtcattgaccag
atctataagaatctctgcagaaacgccagcgctcaggccattctcagtgcggagaatcca
aatgagccctacctggatggcatcaactataactgtgtggctccggggaaacgattcatg
gccatggacaacctgtcaggaggagagaaggccatcgctgctctcgctttggtctttgcc
attcacagctttcgtcctgccccgttctttgtgctggatgaagtggatgctgccctggac
aacacaaacattggcaaagttacaggatttttccgaatgatgtccagagagagctgccag
atcattgtgatctccctgaaggaggagttctactcacgggcagacgctcttcttggagtc
tattctatgtttgatgaatgcatgttcagccgtcttctcaccctggacctcaccccgtac
ccactgaacgacgagaacggcacagacagagagatggacaaatga
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