Ctenopharyngodon idella (grass carp): 127507409
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Entry
127507409 CDS
T08802
Name
(RefSeq) DNA polymerase subunit gamma-1
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127507409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cide03032
]
127507409
03029 Mitochondrial biogenesis [BR:
cide03029
]
127507409
Enzymes [BR:
cide01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
127507409
DNA replication proteins [BR:
cide03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
127507409
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
127507409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
127507409
NCBI-ProteinID:
XP_051740459
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All DBs
Position
24:complement(9500306..9517942)
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AA seq
1207 aa
AA seq
DB search
MMLRLISCHRWRTIVQTGVWLRCCSTSVKPKSQKGSDQTRLNPLNIQMLSRNLQEQIFRG
QIQEYTDEDVERSIRHLEQHKLWGKGTDLLPDVELKLPEMYGNDIDEHFRLLAQKQSLPY
LDAASQLQGARLPRMPKEWAWEVGWTRYGAGGECHRVNFPDENAIVFDVEVCMAEGHCPT
LAVAVSPTAWYSWCSERLVEDRYTWSSDLTLADLIPLETPTNSSQPRGGVWQERLVVGHN
VSFDRAHIKEQYLLKGSKMRFLDTMSLHMAISGLTGFQRSLWMASKHGKRKGLQEVKEHM
KRVSRRSESPMIGSWEWLDISSINNLADVHALYVGGEPLKKEPRDVFVKGSMSDVKTNFQ
ELMQYCALDVLATHEVFTEQLPLFMERCPHPVTLAGMLEMGVCYLPVNQNWRRYLEDAQG
TYDELQREMKKSLMILADDACQLLEGDRYKDDPWLWDLDWDVQDFKQKKMPVSKKKAKQE
AEATPAANENVPKDWDEDPGPPLEEDEAGLDPRRELLQRLKETISCLPKRRQHLPAHPSW
YRKLSVKMSEAEDWSPGASLISLQMRVTPKLMGLTWDGFPLHYTDQHGWGYLVPGRRDNL
DISEDSEGPVCPYRAIESIYKEYCERKGKEQPQYLDIPPSDDFMLTDSAVWQTVEEVSRL
EVFDDEVLSTAGPSKKIKKKQNSLPKNGNGECSYHHGNGPYNDVNIPGCWFFKLPHKDGN
ENNVGSPFSKDFLSKMESGTLQAGREGTNATRALEINKMMSFWRNAQKRVSSQMVVWLRR
AELPRTVRLHHDYDENGQNGAILPQVIPAGTVTRRAVEPTWLTASNARKDRVGSELKAMV
QVPPGYHLVGADVDSQELWIAAMLGEAHFAGIHGCTAFGWMTLQGKKSQGTDLHSRTADA
VGISREHAKVFNYGRIYGAGQPFAERLLMQFNHQLSQQEAANKARQMYALTKGLRRYHLS
EEGEWLVKKLDVKVERAEDGTISLQDLRKISKLASQSTTRGSKRKWNLTGKRVWTAGTES
EMFNKLESIAHSEEPATPVLGCRISRALEPSAVQDEFITSRVNWVVQSSAVDYLHLMLVA
MRWLFEEYDINGRFCISIHDEVRYLVMSEDRYRAALALQITNLLTRCMFAYKLGMMDLPQ
SVAFFSAVDIDKCLRKEVTMDCVTPSNPTGVERRYGLLQGEALDIYQIIKITKGSFAKQL
QQAAKLK
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgatgctccgtctgatatcatgccaccggtggcggaccatcgtacaaactggagtttgg
ttaaggtgttgctccacctcagtgaagcccaaatcccagaagggctcagatcagacccgt
ctgaaccctctcaacatccaaatgctctccaggaacctgcaggagcagatatttcggggc
cagatacaggagtacacggacgaggatgttgaacgcagtataagacacttggagcaacat
aaactctggggaaaaggaacagacctgttacctgacgtagaactcaaattacctgaaatg
tacggcaatgacattgacgagcatttccgattacttgcccaaaagcagagccttccttac
ctggatgcggccagccagcttcagggagcacggcttcccaggatgcccaaggaatgggct
tgggaagtgggttggactcggtatggggcgggtggagagtgccacagagtgaatttccca
gatgagaatgctattgtgtttgatgtggaagtctgcatggcagagggacactgtcctacg
ttggccgtggctgtttccccaactgcctggtactcgtggtgcagcgagaggctcgtagag
gacagatacacctggtctagtgatctgacgctggctgatctcatccccctggagactccc
acaaactccagccagccgcggggtggtgtgtggcaggagaggctcgtggtcggacacaat
gtgagctttgatcgggcacacattaaagaacagtacttactgaagggctccaagatgcgt
ttcctggacacaatgagtctccacatggcgatctcagggctgacgggattccagcgctcg
ctctggatggccagcaaacacggcaagagaaaaggcctacaggaagtgaaggagcacatg
aagcgcgtcagccgtcgctccgagagcccgatgattggctcatgggaatggcttgatatc
agtagtattaataaccttgctgatgttcacgctctctacgtgggcggggaaccgttgaag
aaagaacctcgggatgtgtttgtgaagggcagcatgtctgatgttaagaccaattttcag
gagctgatgcagtactgtgctcttgatgttttagccacacatgaggtcttcacagagcag
ctgcctctctttatggagaggtgtcctcacccagtgacacttgcaggtatgctagaaatg
ggcgtgtgctaccttcctgtcaatcagaactggaggcggtacttagaagatgctcagggc
acttatgatgagctgcagagagagatgaagaaatcgttgatgattttggctgacgatgcc
tgccagttattggagggtgatcggtacaaagatgatccttggctgtgggacttggattgg
gacgttcaggacttcaagcagaagaaaatgcctgtaagcaagaagaaagccaaacaggag
gccgaggcaacaccagcagccaacgaaaacgtacccaaagactgggacgaggacccaggt
cctcctttagaagaagatgaggctggtctagaccccagaagagagcttttacagagactg
aaggaaaccatcagctgcctgccaaagaggagacagcacttaccggcccaccccagctgg
taccgtaagctgagtgtgaagatgtctgaggccgaggactggtctcctggagccagtctc
atcagtctgcagatgagggtcacgcccaagctgatgggcctcacgtgggacggctttccc
ctgcactatactgaccagcacggctggggttacctggtaccaggccgcagagataacctg
gacatctcagaggatagtgaaggacctgtatgtccatacagggcaattgagagcatctat
aaggagtattgtgaacggaaggggaaggagcagccccaatatctggacatcccaccttct
gatgacttcatgttgacggacagtgccgtgtggcagacggttgaagaagtgagtcgattg
gaggtgtttgatgatgaagtgctgagtacagcaggcccatccaagaagatcaagaaaaaa
caaaattcattacccaaaaatgggaacggcgagtgctcctatcaccatgggaacggacca
tacaatgatgtcaacatccctgggtgctggttcttcaaactgcctcataaggatggaaat
gagaacaatgtgggcagcccattctcaaaagacttcctatccaaaatggagagcggtacg
cttcaggcaggacgtgaaggtacgaacgccacacgggcgctagagatcaacaagatgatg
tccttctggagaaatgcccagaaacgtgtcagctcccaaatggtagtatggctccgcagg
gcagaactgccgcgcaccgtcagactacatcatgactatgatgagaatggacaaaatggt
gccattttaccacaggtcatcccagctggaacggtcactcgcagggctgtagagcccacg
tggctgactgcgagtaacgctcggaaagatcgtgtaggcagtgagctgaaggccatggtg
caggtgcctcctggttatcacctggtgggagcagatgtggattctcaagagctgtggatc
gctgccatgctgggcgaagcacactttgcaggaatacatggatgcacagcgtttggatgg
atgacgctccagggaaagaaaagtcagggcacggatctgcacagccgtaccgcagatgct
gtgggcatcagccgtgaacacgccaaggtcttcaactacgggcggatttatggagccggc
cagccgtttgccgagcgactgctcatgcagttcaatcaccaactgagccaacaggaagca
gccaataaagctcggcagatgtacgcacttaccaaaggactgcgcagatatcacctgtct
gaggaaggggaatggttggtaaagaagttggatgtaaaggtggaaagggctgaggatggc
accatctcgctccaggatttgcgtaaaatctcaaaactggcatcccaaagtaccactagg
gggagcaagaggaagtggaatctcactgggaagcgtgtgtggacggccgggacagaatca
gagatgttcaataagctggaaagtatcgcccactctgaggaaccagccactccagtgctg
ggctgcaggatatccagagctctggaaccgtctgctgttcaggatgagttcattaccagc
agagtcaactgggtggttcagagttcagcggtggattatctccatctgatgctggtggcc
atgcgctggctgtttgaggagtatgacattaacgggcgcttctgcatcagtattcacgat
gaggtgcgctacctggtgatgagcgaagatcgctacagagctgcgctggccctacagatc
accaacctgctcaccaggtgcatgttcgcatataaactgggaatgatggatctgccgcag
tcagtggcttttttcagtgcggtggacatcgataagtgcttacggaaggaggtgaccatg
gactgcgtgactccatccaatcccacaggagtggagcggagatacgggttactacaaggt
gaggcgttggacatttatcagattataaagatcaccaaagggtcttttgccaaacaacta
caacaagctgcaaagttaaagtaa
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