Ctenopharyngodon idella (grass carp): 127507424
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Entry
127507424 CDS
T08802
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04620
Toll-like receptor signaling pathway
cide04621
NOD-like receptor signaling pathway
cide04622
RIG-I-like receptor signaling pathway
cide04623
Cytosolic DNA-sensing pathway
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127507424
04621 NOD-like receptor signaling pathway
127507424
04622 RIG-I-like receptor signaling pathway
127507424
04623 Cytosolic DNA-sensing pathway
127507424
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127507424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127507424
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127507424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
127507424
NCBI-ProteinID:
XP_051740491
LinkDB
All DBs
Position
24:21316369..21324916
Genome browser
AA seq
422 aa
AA seq
DB search
MAAMQSSTIGKPQFGPWLIEQVESGRYEGLRMIGNDIFRIPWKHNSRRDLGDEDIKIFKE
WAVVSGKINEHPNDKAKWKTNFRCALYSLKNFEMLEDHSKDPDDQHKVYRIIRPQNHQEI
QSAEPVQLPLPFISEVYNNYMHEDMEQELLSQVETMHLNQQSAEPQPWDCSQQNIQTTSR
SYFGTPYPEQCMQNNMPDPVQQPYTTAQQWNVPALCDLEISINYRKTEVLKTRLCSSLVQ
FYYQCDPSELRGEPIRFPTTEGLIDHKQIQFTKRILDSIQRGLQLEVNQYGIYGFRQDKC
KVFVSTSDPSEIQNPEPRKLHQNSREQLFSFDKYIRDLMDFKENRRGSPDYTIYLCFGEK
LPDGKPLEKKLITVKVVPLICRELHERAQMEGASSLRDNVSLQISHNSLFDLINSLGLPS
MD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgatgcagagcagcacaatcggcaaacctcagttcggtccatggcttatagag
caggtggaaagtgggcggtatgagggattacgcatgataggcaatgacatatttcgcatc
ccttggaaacacaactctagaagagaccttggggacgaggatatcaaaatatttaaggag
tgggctgtggtcagtgggaagatcaacgagcaccctaacgacaaagccaaatggaagaca
aatttccgttgtgcgctttatagcctgaaaaactttgagatgttagaggatcactccaaa
gatccagacgaccaacacaaagtctatcgcattatccgtcctcaaaatcaccaagagata
cagagtgcagagccggttcaacttccgctaccattcatttctgaggtctataataattac
atgcatgaagacatggagcaggaattgctcagccaggtggagacaatgcatctaaatcaa
caatctgcagaaccccaaccatgggattgttcccaacaaaacatacagactacctcgagg
agctactttgggaccccctacccagaacaatgcatgcagaacaacatgcctgacccagta
cagcaaccctacactactgcacagcaatggaacgttcctgctctctgcgacctggagatc
tcaatcaactacagaaaaacagaagttttgaaaactcgcctgtgttcgtcactcgttcag
ttttactaccagtgtgacccatctgagctgagaggagagccaatacgctttccaaccacc
gagggtctgatcgaccacaaacagattcagttcactaaacgcatcctagacagcattcag
agaggtctgcagctggaggtgaaccagtatggcatctacggcttccgtcaggacaagtgt
aaagtcttcgtcagcaccagtgacccatctgagatccagaacccagagcccagaaaactg
catcagaactccagggaacaactgttcagttttgataagtacataagagatctgatggat
tttaaagagaacagacgggggtctccggattacaccatctacctgtgctttggggagaag
ctccctgatggaaaaccactggagaaaaaacttatcactgtcaaagttgtccctctgata
tgccgcgaactacatgaaagagctcaaatggagggagcgtcctctcttcgagataatgtt
agcttgcaaatctcccacaacagcctttttgaccttataaattctttgggtctgccttca
atggactaa
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