Ctenopharyngodon idella (grass carp): 127507425
Help
Entry
127507425 CDS
T08802
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127507425
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127507425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
Alanine_zipper
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
127507425
NCBI-ProteinID:
XP_051740493
LinkDB
All DBs
Position
24:20912403..20950140
Genome browser
AA seq
1847 aa
AA seq
DB search
MGEGGRESRHAQKIGGGGEKVSRSSSCSSLAATESAGIRFSAAFSKRKTRITGPRLKKES
RNMLLQLAGLLILGAWALADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGLQKPE
PFCIVSHLQEEKKCFVCDSRETYDERMHQVTSHRIENVVTTFAPNRLKTWWQSENGLENV
TVQLNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGKTWQVYRYFAYDCEASFPFISQGP
MTKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTRLH
TLGDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPIDGVGEAVEGMVHGHCMCN
HNTMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVYRASGNVSGGV
CDGCEHNTMGHKCEQCKPFFYQHPEKDIRDPNICEPCNCDPVGSLNGGVCDPLTDVSLGL
IAGQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQPCTCNALGTVPGGSPCDTDSGNCYCK
RLVTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNHCSPETGQCQCREHMFGRRCDQ
VESGFYFIALDHYTYEAEDAKFGPGVTVVPRTHPQDRSPTWTGIGFVNVPEGAYLEFSID
NIPYSMEYDIIIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQMVSLHPGSR
YVVLPRPVCFEEGLNYTVRLSLSLYSALSDMQSPYTLIDSIVLMPHCKNLDIFSGSGSEG
GDLVTNSAWETFQRYRCLENSQAVVKTPMTDICRNYIFSVSALLHQGVKACQCDPQGSLS
TVCDPSGGQCQCRPNVVGRNCDKCAPATFLFGPQGCRPCDCSPEGSVNSFCHEATGQCEC
IPGAYGRQCDRCLPGHWGFPNCRPCTCNGHAEQCDSHTGQCLTCRDHTTGHNCERCLKGY
YGDPVLGSGDHCRPCMCPDGPGSGRQFSDGCYKNLDSNQVFCVCNQGYKGARCEECAPGY
YGNPHEVGGECRPCQCNNNIDMTDPESCDARTGACLKCLYHTEGEGCNRCKLGYYGNALT
QSCRKCVCNQMGTAAETCPSQGNCNCDLNSGQCQCLPNVVGQHCDQCAPDSWNMASGKGC
EACDCDLNHSFGSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEIKCHACDCDPRGIAE
QQCNKATGHCVCVEGVSGPRCDACARGYTGEFPQCERCHQCFAEWDVIVGDLTNQTHRLV
QKVNTIKATGITGPYQATINNVESSANSIRNILAQNPATEPLTEIQELLEKATDLMAKMN
TNLNLTEETLSEISSDNNSTDTKLNSLKEEAQKLEQTVKDLQEQVEFVKNSDVRGARASV
NRYYEQSQKAEARANASTSDPYNLVNQSATLRTETEVLMNQTKEEFSQRQDEFSTKLDNL
AGQLETLDLSELSEKTCGSPAGSENCADSPCGGLSCVDGEGNRKCGGEGCDGLTTLAHNA
WQKAKDFDLEINSAMEEVDKLSKMVSEAKVKADEAKLNAQEVLAKTNETKKRVDGSNEEL
RQLIKQIRDFLTQDGADLESIEAVANEVLQMQMPTTPAQLQNLTAEIRERVGSLTDVEDI
LNQSADDILKAESLLEQARKARKEATDVKDTAEMVKEALKQAERAQSSVTEALKQATADI
KGTQDLLVSVESETSDSELKLSNATRRLLKLESDVALLKEKALNTSTSANITEKEADSIN
ALAAQLKKDLDSELKDKYSTVEELITQKAEGVAEAKKRAEELQQEAKNLLLQASEKLQLL
KNLEKSYDENQKLLEDKANELVELEKAVKDLLQEISHKVTVYSTCLF
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgggggagggagggcgcgagtcgaggcatgcgcagaagattggcggcggaggagaaaaa
gtttcgcgcagttccagctgcagtagtttagcagcaacagagtctgcagggatcagattc
agcgctgcattttccaaacgcaaaaccaggattactggacccagactgaagaaagaatct
agaaacatgctgttacagctcgcaggccttctaattctaggggcatgggctcttgcagat
gtgcctgagctgggagatgtttgcacagaggggagctgttatcccgccacaggagatctt
ctcattggaagagctcaccaactctcggccacctcaacatgcggactccagaaacctgag
cccttttgtatcgtcagtcatttgcaggaagagaagaagtgctttgtgtgcgattccagg
gagacctacgatgagaggatgcaccaagtaaccagccacagaattgaaaatgttgtgact
acatttgctccgaaccgcctcaagacttggtggcagtcggaaaatggcctggagaacgtc
acagtccagttgaaccttgaggcagagttccacttcacccacctcatcatgacctttaaa
acgtttcgaccggctgccatggtgatcgagcgttcttcggactttgggaagacttggcaa
gtgtaccgttactttgcttatgactgcgaggcctccttccccttcatctctcaaggaccc
atgaccaaagtggacgatgttatctgcgattctcgctactcagacattgaaccctcaact
gagggcgaggtcatctttagggttttggatccagccttcaggattgatgatccctacagc
cccagaatccaaaacatgttaaagatcactaatctgagggtgaagttcactaggctgcac
actctcggggacaaccttctggactcgcgtatagagatcaaggagaagtattactacgca
atctacgacatggtggtcagaggaaactgtttttgctatggacacgcatctgaatgcgcc
cccattgatggagttggagaggccgtggagggcatggtccatggccactgtatgtgtaat
cataacaccatgggtctgaactgtgagcgctgtcaggacttctaccatgacctgccatgg
aggcccgccgagggacgtaacaccaacgcctgtaaaaagtgtaactgcaatcatcactct
gattcctgtcattttgacatggccgtgtatcgggcctcgggtaatgtgagcggtggcgtg
tgcgacggctgcgagcacaacaccatgggtcacaaatgtgagcagtgcaagccgttcttc
taccaacatccggagaaagacatccgcgaccccaacatctgcgagccctgcaactgtgat
ccggtcggctccctcaatggcggagtttgtgatccgctgacagacgtgtctctcgggctg
atcgcgggtcagtgccgctgtaagcctaatgtggagggagagcgctgtgaccagtgcaaa
cagggccattacggactcagcgacgaccctctgggatgccagccatgcacgtgcaatgct
ttggggacagttccaggtggaagcccatgcgatacagactcaggaaactgctactgtaaa
cgcctggttaccggaaggaattgtgaccagtgtctgcctcagcactggggtctcagtaac
gacatggatggctgcagaccatgtgactgtgatcatggtggcgcaatcaacaaccattgt
tctcctgaaacgggccagtgtcagtgtcgcgagcacatgtttggcaggcgctgcgaccag
gtggaatctggtttttacttcatcgctctggaccactacacttatgaagcagaagacgcc
aagtttggaccaggtgtgaccgttgtccctagaacacaccctcaggacagatcccctact
tggacaggcattggttttgtgaatgtccctgaaggtgcctatcttgaattcagcattgac
aacattccctactctatggagtatgacattatcatccgatatgaacctcagctgccagag
cagtgggaagaagtgttgatgactgtcatcaggcctcgtgtcattaccgccgacagccgc
tgtgccaacactatgcccgacgatgacaaccagatggtgtctctgcatcctggatccagg
tatgtggtgctgcccaggcctgtgtgttttgaagagggcttgaactacaccgtgcgcttg
agtctgtctctatactcggctctcagcgatatgcagtcaccatacacgctcatcgactcg
atcgtcctcatgccacactgcaaaaacctggatattttctctggctctggatcagagggt
ggggatctggtgaccaacagcgcctgggaaaccttccagcgctaccgctgtttggagaac
agccaagcggtggtgaaaacccccatgactgatatctgcagaaattacatcttcagcgtt
tcggctcttctgcaccagggagttaaagcctgccagtgtgacccgcagggttctctcagc
actgtttgtgacccgagcggtgggcagtgccagtgtcgccccaacgtggttggcaggaac
tgcgacaagtgcgccccggctaccttccttttcgggccgcaaggctgcaggccatgtgat
tgcagtcctgagggatctgttaactctttctgccatgaggccacgggtcagtgtgaatgt
attcccggagcgtatgggcggcagtgtgaccgttgtctgcctggacactggggtttccct
aactgtcgcccctgcacttgcaatggccacgctgagcaatgtgactcccacaccggacag
tgtctgacctgcagagaccacaccactggccacaactgcgagaggtgtttgaaaggctac
tatggtgaccctgtcctgggctctggagaccactgccgcccctgcatgtgtcctgatggt
cccggcagcggccggcagttttccgacgggtgttataagaatctcgactccaaccaggtg
ttctgcgtctgcaaccagggatataaaggtgccaggtgtgaagagtgcgcccctggttat
tacggaaacccacacgaggtgggcggagaatgtcggccttgtcagtgcaataacaacatt
gacatgacggacccggagtcctgtgacgcccgcacgggcgcctgtctcaaatgcctgtac
cacacagagggcgagggctgcaaccgttgcaagcttggttattacggcaatgctctgacc
cagagttgcagaaagtgtgtgtgtaatcaaatgggcactgctgcagagacgtgtccctct
caaggtaactgcaactgtgacttaaacagcggacagtgccagtgtcttcccaacgtggtg
ggccagcactgcgatcagtgcgccccggactcttggaacatggccagcgggaaaggctgc
gaggcctgcgactgcgacctcaaccattccttcggctcttcctgcaatgagattatggga
cagtgctcttgtaaacctgggtttggtggcagaacctgccgagagtgtagagaactgttc
tgggggaaccctgagatcaaatgtcacgcgtgtgactgtgacccaagaggcatcgcggag
cagcagtgcaacaaggccacaggtcactgcgtttgtgtggagggtgtttccggaccccga
tgtgacgcgtgcgctcgaggctacacaggcgagttcccacagtgcgagcgctgccatcag
tgctttgccgaatgggatgtaattgtaggcgacctcaccaatcagacccatagactggtc
cagaaggtcaataccatcaaagccactggcattactggaccctaccaagccaccatcaat
aatgttgaaagcagcgccaactcaatccgcaacatcctggcccagaatccagccactgag
cctctaacggagatccaggaacttctcgaaaaagctactgatttgatggctaaaatgaac
accaaccttaacctaacggaggagaccttgtctgagatctcatctgacaacaacagcaca
gacaccaaactgaactctctcaaagaagaagctcagaaactggaacagacagtgaaagac
ctgcaggaacaggtggagtttgtgaagaattcagacgttcgaggggccagagccagcgtg
aatcgatattacgagcagtcccagaaggcggaggcccgtgccaatgcctccaccagtgac
ccatacaatctggtcaatcagtctgccaccctgcggacagaaacagaggtcttgatgaac
cagaccaaagaagagtttagtcaaaggcaggatgagttttcgacaaaactggacaacctg
gcaggacaactagagactctggacctgtctgagcttagcgagaagacatgtggtagtcca
gctggctctgagaactgtgccgactctccctgtggaggcctgagctgtgtggacggggaa
ggaaacaggaagtgtggaggagagggatgtgatgggctcactacgctggcccacaatgcc
tggcagaaagccaaggactttgacctggagattaacagcgccatggaggaagtggacaag
ctgtccaaaatggtatcagaggcgaaggtaaaagctgacgaagcaaagctgaatgctcag
gaggtgctggcgaagaccaatgagaccaaaaaacgcgtggacggcagcaacgaggagctt
cgccagctcatcaaacagatccgagacttcctcactcaagatggagcggacctggaaagc
atcgaggctgtggccaatgaagttctgcagatgcagatgcccaccacaccagcccagctg
cagaacctgacagcggagatcagggagcgtgtgggcagcttgacagatgttgaggacatc
ctcaaccagagcgccgatgacatcttgaaagcagaaagcctgctggaacaagcccgcaag
gccaggaaggaggcgacagatgtaaaagacacagctgagatggtgaaggaggccttgaag
caggccgaacgcgctcagagctctgtaaccgaggcgttgaaacaggccactgctgacatc
aagggaacacaagacttgctggtctcggtggagtcagagacatccgactcggagctaaaa
ctgagtaacgccacacgaaggctcctgaagttggaaagcgatgtagctctgctgaaagaa
aaggctctcaatacctccacaagcgccaacatcacagagaaagaggctgatagcattaac
gcactggctgcgcagctcaaaaaggatctggattcagagctgaaagataagtacagtact
gttgaagagctgatcacacagaaagctgaaggagtggcagaggccaagaaaagagcagag
gaactccaacaggaagccaaaaatctgttgctacaggccagcgaaaaacttcagcttctg
aaaaatcttgagaagagctatgatgaaaatcagaagctgctggaggacaaggccaatgag
ctggtggaactggagaaggctgtgaaagacctgcttcaggagatcagtcataaagttact
gtctacagcacctgtctgttttaa
DBGET
integrated database retrieval system
