Ctenopharyngodon idella (grass carp): 127507454
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Entry
127507454 CDS
T08802
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04350
TGF-beta signaling pathway
cide04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127507454
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127507454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127507454
Cell adhesion molecules [BR:
cide04515
]
Immunoglobulin superfamily
DCC/UNC5 family
127507454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
fn3_SORL1
fn3_2
DUF4998
SusE
EphA2_TM
FAM176
Motif
Other DBs
NCBI-GeneID:
127507454
NCBI-ProteinID:
XP_051740537
LinkDB
All DBs
Position
24:6052207..6187583
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AA seq
1434 aa
AA seq
DB search
MAERGARLLVFFTSLTVLRFGGADKGSDIQGFTPFRFSVEPIDTLAVRGLPAVLNCSAIS
NAPVRVEWKKDGTFLNLVADDRKRQLADGSLVISTVVHSKHNKPDEGVYQCVATIDNLGT
ISSRTARLTVAGLPRFLSQPEGVSVRMGGTEMLSCEVTEELVPFTRWERDGRAVELDGRV
IQLPSGALVISNASQTDGGLYRCTIDGLGPPKNTEEAELQVSADSGVEEKLETLQGPVAV
AKVVGESVLLPCVMKGYPVPVIRWTFNDRPIDEGHERFAVIGGGSLQIVNLTEEDAGIYV
CQADSGNMTSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGD
TVIPSDYFRIVKQHNLQVLGLVKSDEGFYQCLAENDAGNVQASAQLIILALDVALPSTVP
SLTDATTDHVASSPAERSGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGENITYSVFYS
LDGTNRERVENTSGPGEMQVTIQNLVPDTKYTFRVVASNTNGPGESSAPLTVATQLEVQV
PGPAPNLQVVSVSATSVALSWERPATGNGDIQTYKLFYSEKGQDSEQDMDVTGLSYTMTG
LKKFTEYSFRVVAYNKHGPGVSTEDVTVRTLSDVPSAPPQNLTLEVLNSTSIMVRWQPPP
PGTLNGELTGYKLRYRKGLRRADAIEISTSQLFQLIDGLEKGKVYTVRVSATTVNGTGPT
TEWIAAETFENDLDESQVPGVPSSLHVRPLVNRIVVSWTPPENQDILVRGYKIGYGIGSP
HAHTVTLDYKQRFYSIDNLDPSSHYVITLKAFNNMGEGIPIYNSATTRPQSDPIDPDIDF
YELFNNPYTPAPDPTPMLPPVGVQATVLSHDTVKVSWADNSLAKNQKITDSRYYTIRWKT
NIPANTKFKTANTTSLFHTVTALKPNTLYEFSVMVTKSRRSSTWSMTAHGTTLESIPSSA
PKDVTVISKEGNPRIININWQPPTEANGKITGYIIYYSTDVNAEVHDWVVEPVVGNRLTH
QIQGLTLDTAYYFKIQARNSKGMGPMSDAVQFRTPKAEPSDKMSSDQGLQVKPGHPTLPE
HGIGSNMDKPGITGSQENHILVIVVIVSVGVFTIIAVVVGAVLCTRRSNSHQKKKRAACK
SNTGSHKYKSSSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETPIPRTAQDPAVEPAH
QRRGHEVEESVSTMAGRRGVRSKMMMPFDSQPPQPVISAHPIHSLDHLHHHHHHYHLPPR
GYLHHQISLRAPATPNTYLDRAPSAESVRNQPPAPEPPVAPSQPITTAELQKTEAVIKEE
EPPSINPLTAHVRPAHPLKSFAVPAVTVSAHNPPTYETALPSTPLLAQPAPGVKTASIGT
LNRARAPMAVTVPSAPDQSETSKMLDMTYETDELSEEMAHLEGLMKDLNAITTG
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcacggctgctcgtgtttttcacaagtctcaccgttctccggttc
ggcggtgcggataaaggttctgacattcaaggttttaccccgttcaggttctcggttgaa
cccatcgacacgctggccgtacgcggcctccctgctgttctgaactgctcggccattagc
aacgctccagtaagggtggaatggaagaaggatggaacgttcctgaaccttgtggcggac
gaccggaagcggcagttagcggacggctctttggtcatcagtacggtggtccactccaaa
cacaataagcctgatgagggggtgtaccagtgcgtggccaccatcgacaatctgggtacc
atcagcagccgaaccgcacgactcacagtggcaggacttccgcggttcctcagtcagccg
gagggcgtgtctgtgcgcatgggcggcactgagatgctgagctgtgaggtgacggaagag
ctcgtcccgttcacccgctgggagagggacggtcgggccgtggaattggatggcagagtg
atacagctgcccagcggagctctggtcatcagcaatgcctcccagaccgacggtggactc
taccgctgcacaatagatggtctgggaccaccaaaaaacacagaggaggctgaactacag
gtgtccgcagattcgggtgttgaagaaaaactagagactctccagggcccggttgccgtg
gcaaaggttgtcggggagagcgtgttgttgccatgcgtcatgaagggatacccggtacca
gtgattcgctggacgtttaacgaccggccgattgatgaaggccatgagcgttttgctgtg
attggcgggggaagcctgcagatcgtcaacctgactgaagaggatgctgggatatacgtc
tgccaggcggacagcggcaacatgactagcgagatccaggcggagctcacggtgcacgtt
cctccacggttcttgacgagaccctccaacacttacgcccaggagtccatggacatcatc
tttgagtgtgacgtcactgggtcgccgccgcccaccgtcaaatggatgaaggatggagac
acggtcatccccagtgattatttcaggattgtgaagcagcataacctgcaagttttgggt
ttagtcaaatcagatgaaggtttttatcagtgtttagcggagaacgacgccgggaacgtc
caggccagcgctcagctcatcatactggctttagacgttgcccttccttctactgtccct
tcattgaccgatgccactactgaccatgtagcgtccagcccggccgagcgcagcggcccc
accccctctgccccgcgtgatgttgtggcgtctctggtgtccacccgattcatcaagctg
acgtggcgtcttcctgccgagccgcacggggagaacatcacctactctgtgttctacagt
ctggacggcactaacagggagcgtgtggagaacaccagcggaccgggagagatgcaggtt
accattcagaacctcgtccccgacaccaagtacacctttcgggtggtcgcgtccaacact
aacggcccgggcgagagttctgccccacttacagtggccacccagctggaggttcaggta
ccgggtccagccccgaatctgcaggtggtctctgtcagcgccacctcggtcgctctgagc
tgggagagaccggccaccggaaacggggatattcagacctacaaactcttctacagtgag
aagggacaagactcggagcaggacatggacgtcacgggtctgtcctacaccatgacgggg
ctcaagaagttcacagagtacagtttcagggtggtggcgtacaacaaacacggccctggc
gtctccaccgaggacgttacggtccgaacgctgtctgacgtgccgagcgcccctccgcag
aacctgactctggaggtcctgaactcaacgagcatcatggtccgatggcagccgcctccc
cctggtaccctgaacggagagctgacggggtacaaactacgataccggaaagggctgagg
agagcggacgcaatagagatctcaacctcacagctctttcagctcattgatggcttggag
aaaggaaaggtgtacacagtgagagtgtcggccaccaccgtgaacggaaccggaccaacg
acggagtggatcgcagcggaaaccttcgagaatgacctggacgagtctcaggtaccagga
gtcccgagttctcttcatgttcgtccgcttgtaaaccgaatcgtggtgagttggactcct
ccagaaaaccaggacattttagtccgaggttataaaatcggatatggaatcgggagccct
catgcccacacggtcactctggattacaagcagcgtttctacagcatcgataacctcgat
cccagttcccattacgtcatcactcttaaggcgttcaacaacatgggcgaaggcattccc
atctacaacagcgccaccaccagacctcagtccgaccccatagaccctgatattgatttt
tatgaactcttcaataacccatacaccccagcacccgaccccactcccatgctgcccccg
gtgggcgttcaggccactgtcctcagccacgacaccgtcaaagtcagctgggccgacaac
tctctcgcaaagaaccagaagatcactgattccagatattacaccatccgctggaagacc
aacatccccgccaacaccaaatttaagacggcaaacaccacgtctctgttccatacggta
acggctctgaaacccaatacactttatgagttctctgtaatggtgaccaagagccgcagg
agcagtacatggagtatgacggcccacgggaccacccttgagtccattcccagctctgct
cccaaagatgtgacggtgatcagtaaagagggaaatccacgaatcatcaacatcaactgg
cagcctccgactgaagccaacggcaaaatcacagggtacatcatctactacagcaccgat
gtcaacgctgaagtccacgactgggtcgtggagcccgtggtgggaaacagactgacccat
cagattcagggactgacgctggacaccgcctactactttaagatccaggccagaaactcc
aaaggcatgggacccatgtcggacgcggtgcagttccgcacccctaaagctgaaccatct
gacaaaatgtcaagtgatcaagggctgcaagtcaaacccggtcacccgaccctgccggag
cacgggattggatccaatatggataaaccaggcatcacgggcagccaggagaatcatatc
ctggtgatcgtggtcattgtttctgttggagtgttcaccatcatcgctgtggtcgtgggg
gccgtcctgtgcacacgccgctccaactcccatcagaagaagaagcgtgcagcctgtaag
tccaacaccggctcccacaagtacaagagctcgtctaaagacctgaaaccacctgatctc
tggatccatcatgagcgtctggagctcaaacccatggacaaatcacccgaccccaacccg
gtcatgacagagacgcccatccctcgcaccgcccaggacccggccgttgagcccgcccat
cagagacggggtcatgaggtggaggagagcgtgtccactatggccggtcggaggggagtg
agatctaaaatgatgatgccattcgactctcagccgcctcaacctgtgattagtgctcac
cccattcattccctcgatcatcttcatcaccatcatcatcactatcacctcccgccgcgc
ggctaccttcatcaccagatcagcctgagagcgcccgccacgcccaacacatacttagac
agggctccgtctgcagagtctgtgaggaatcagccccctgcacccgaacctccggttgcc
cccagtcagcccatcactacagctgagctccagaagacagaggcggtgatcaaagaggaa
gagccgccgagcataaacccgctaacagcccacgttcgaccggcacacccgctcaagagc
ttcgctgtgccagctgtcactgtttccgcccataacccgcccacctatgagaccgcctta
cccagcacccctctgctggcacaaccagcgcccggcgtgaaaaccgcgtctatcgggaca
ctgaatcgagctcgagctccaatggcagtaacagtcccgagtgctcctgaccaatcagaa
accagcaagatgctggacatgacgtatgagacggacgaactctccgaggaaatggcccat
ctggagggtttgatgaaggacctgaacgccatcaccacaggctga
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integrated database retrieval system
