Ctenopharyngodon idella (grass carp): 127507470
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Entry
127507470 CDS
T08802
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1B
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04137
Mitophagy - animal
cide04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127507470
04137 Mitophagy - animal
127507470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127507470
03029 Mitochondrial biogenesis [BR:
cide03029
]
127507470
Membrane trafficking [BR:
cide04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
127507470
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
127507470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
127507470
NCBI-ProteinID:
XP_051740557
LinkDB
All DBs
Position
24:complement(9000909..9018362)
Genome browser
AA seq
1362 aa
AA seq
DB search
MAVQNRNSVLILSGRERGARMLGSQRLLQQLVEDRTRWMKWQSQKVELPDNPRSTFLLAF
SPDRNLVASTHVNHNIYITDVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTASETE
RVRLVRFDPLGHNLLTAIVNPSNQQNEDDSEVPMDSMEMALFRQRSLLRSPPVRRTPILH
NFLHILSSRSSGAQAGDQSRPAPEPREPPSIPRFQYPVRTEPGDRPALQGCTQHLGLGCL
CSRCAASRNLFTQNPTGLQPSDLPQPQTQSGPSAFLPAPSQTRTSTDRPSAFSSVFSGTA
GNSTHRGLLPLRTIDPLGSQAPGPLEVPGRLPGADWSGSLLSTGHEHGLGAIGVESSSGR
GVLPPPRTSSSSMDLLSLRRFPDGSSSSPIYTSATEGRGLVLPGTDPNRGRANDGTSSGH
HPIYDNTQRNNPASIRNVLQCNLSRYFMEYERMQELERPGGSREVVGGPGPMQELLNSSM
DTERPGPSHNGSSHTGNGGTATGPSQNHPNRCRSCHNLLTFNHDTQRWERSGQTSSSSSQ
DGPSWPLSVPPFEDPGQGARVEAQAPEMRPMELSEASSSLQGQQPMGLVYNQETGQWESV
YRQPTASASSEAAQDALNPEVPVDNPDEDSLRRRLLESSLFPFSRYDMSGSRDHPIYPDP
ARLSPAAYYAQRMIQYLSRRESIRQRSLQNRLRTLSNSQADSQSNNPSSTPPEASDGDYE
DIEEPGDRTRHRMPRNARMSAPSLGRFVPRRFLLPEYLPYAGLFHERGQSGLATHSSINR
VLAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNATVNVLVPHCKIYNDASCDI
SADGQLLAVFIPSSQRGFADEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGCYVM
VGLASRRILLHPTTDHMVAQVFRLQQPHGGETSIRMMFNVVYPMAPDQRRHVSINSARWL
PEPGMGLAYGTNKGDLVICRPVDFRSDGDSPSDLSSDSLFTVNSSSRTRGVERPGTSRSG
WRFDRDMGLMNAIGLQPRQAAPSVTSQGTQTPVVRLQNAETQTERELPSASTFQTTHTSR
HTVQMASTSTERHTHPETTHTLLHTPVQASVSEGSLNRTNLPATYHADSAAEPGPGEDAL
SRIRRLMAEGGMTAVVQRERSTTMASMGGFGNNIVVSHRIHRGSQTSVRSTQVGNPTAET
PAGLTIPTLFHTEPLVDSLEAPGPSGSSGAPLPPQFTTRSEVVRVSPMVEPDLFGDHQAD
VVHHPSPRGLNMSNHSNNNNNDHNNSYSESRSRDYPDDLYGR
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcagaacaggaactctgtgctgatcctgtcaggacgagagcgaggagctcgc
atgctgggctcccagcggctcctgcagcagctggtggaagaccgaacgcgctggatgaaa
tggcagagccagaaagtagagttgccggataatccacgatccaccttcctgctggccttc
agtccagataggaatcttgtggcctcaacccacgtaaaccataacatctatatcacagat
gtgaaaacaggaaagtgcctgcactccttagtgggccatcgacgcacaccttggtgtgtg
acctttcaccccaccatccccggcctggttgcctctgggtgccttgatggagaagttcgc
atttgggacctgcatggtggtagtgagagctggtttacagagagtaatgttgccatcgct
tctctagcattccatcccacggctcagctcctcctcatcgccacaaacaacgaacttcac
ttctgggactggagccgaccagaaccttttgcggtggtcaagaccgccagcgagacagaa
cgtgtccggttggtgagatttgatcctttaggtcataatcttttgacagctattgtgaac
ccatccaaccagcagaatgaagatgactctgaagttcccatggacagtatggagatggct
ttgttccgccaacggtctcttttacgctccccacctgtacgtcgaacgcccatcctgcac
aatttcctgcacatcttgtcctctcgctcttctggggcacaggccggcgatcagtcccgt
cccgccccagagccccgtgagcctcccagcatacctcggttccagtacccggtgcggaca
gaaccgggtgaccgccctgccttacagggctgcacacagcatttgggtttgggctgcctg
tgcagtcgctgcgccgcctcgcggaacctattcacacagaatccgacaggcctccagcct
tcggatttgcctcaaccacagactcagtcaggcccctcagccttcttgcccgcccccagc
cagacccgcacctccacggatcgaccttctgcttttagcagcgtgttcagcgggactgcg
gggaactctacacatcggggtctcttgcctcttaggactattgatcccttggggtcacag
gcacccgggcctctcgaggtccccgggcgtctccctggggctgattggtctggtagtctg
ctgagcacaggacatgaacatgggttaggtgcgattggggtagaaagcagcagtggaaga
ggtgtgttgccccctcctaggacgagctcttcttctatggatctcctctccttgcgcagg
ttccccgatggttcctcttcatcacccatatacacatctgctacggaaggacggggccta
gtgctgcctggcaccgatcccaaccggggacgagccaacgacggcacaagtagcggtcat
cacccgatctacgacaacacccaacgcaacaaccccgcctccatacgcaacgtcctgcag
tgtaacctgagccgttacttcatggaatatgagcggatgcaggagttggagcgacccggt
ggcagccgagaggtggtaggtggaccaggacccatgcaggagctgctcaacagtagcatg
gacacagaacggcccgggccttcgcacaacggctcttcccacactggaaatggaggcacg
gccaccggcccctcacaaaaccaccccaatcgctgccgttcgtgccacaacctcctcacc
ttcaaccacgacacccagcgctgggaacgttctggtcagacctcttcttcctcttctcaa
gacggaccatcctggccactttcagtgcctccgtttgaggacccaggtcagggtgcacga
gtggaggcccaagcccctgagatgaggcctatggagttgagcgaggcctcctctagtcta
caggggcagcaacccatgggtctggtgtacaatcaggagacagggcagtgggaaagcgtg
taccggcaaccaacggccagcgcttcttctgaggcagcgcaagacgccttaaacccagag
gtgcctgttgataatccggacgaggactcacttaggaggaggttgttggaatcgtcactg
tttccattctctcgatatgatatgtctggctccagagatcatcctatatacccagatcct
gccaggctctctccagctgcttactatgctcaaaggatgatccaatatctgtctcggaga
gaaagcatacgccagcgttcactgcagaatcgcttacggacactctcaaactctcaagcc
gacagccagtccaacaacccctcctccacaccaccggaagccagtgatggagactatgag
gacatcgaggagcctggagacaggacaagacacagaatgccccgcaatgctcgaatgtcg
gccccatcgctcgggcgctttgttccacggaggttcctgttaccagagtacttgccttac
gctggacttttccatgaaaggggtcagtcaggcctggccactcactcctccattaacaga
gtattagcaggagcatctataggtgatgggcagtcagctgtggccagtaacattgccaac
accacttataggctgcagtggtgggatttcaccaagtttgaccttccggagatcagcaat
gccactgtgaatgtgttggttcctcactgtaagatctacaatgatgccagctgtgatatt
tcagcggacgggcagctgctggccgtgttcattcctagcagccagcgaggttttgctgat
gagggcatcctggccgtttactcccttgctccccataatcttggagaaatgctgtacacc
aagagattcggtccaaatgcaatctcagtgagtctttcacccatgggctgctacgtgatg
gtaggactggcctccaggcggatcctgctccatcccaccaccgaccacatggtggcgcaa
gtgttccgtctgcagcagccacacggaggagagacgtccattagaatgatgtttaatgtg
gtgtaccccatggctccagaccagaggagacacgtcagtattaactcagcccggtggctt
ccagagccaggcatgggattggcctacggaaccaataagggcgacctggtcatctgcagg
ccagttgatttccgcagtgatggagacagtccgtcggatctcagctcggattctttgttt
actgtcaacagcagcagccgaacccgtggagtggagcgcccagggacgagtaggtccggc
tggagatttgaccgagacatgggccttatgaacgctattggcctgcagccgcgtcaggcc
gcaccttctgtgacctcacaggggacgcagacaccagtggtgcgactgcagaatgccgag
acccagacggagagagaacttccttcagctagtactttccagaccacgcacacatccaga
cacacggttcagatggccagcaccagcactgagagacatacacacccagagacaacacac
acactgttacacacaccggttcaggcatcggtttcagagggatcactgaaccggaccaac
ttgcccgccacatatcacgcggattcagcagccgagcctggtccgggagaagacgcgctg
tctcggatccgccgcctaatggcggaaggaggaatgacggccgtggtccagcgggaacgc
agcactactatggcctcgatgggtggctttggaaacaacatcgtggtcagccatcggatt
caccgtggctcgcagacctcagtcaggtcgactcaggtgggaaatccaaccgcggaaaca
cctgctggactcactatcccgactctttttcacactgaacccttggtagactctctagaa
gctcctgggccatcagggtccagcggcgccccacttccgccacagtttacaactcgctct
gaggtcgtgagggtgtctcctatggttgagccagacttgtttggcgatcatcaagctgat
gttgtgcaccacccatccccgaggggtttgaatatgtccaaccatagcaacaacaataac
aatgaccataacaacagctacagtgaaagccggagccgagattatcctgatgatctgtat
ggcagatag
DBGET
integrated database retrieval system
