Ctenopharyngodon idella (grass carp): 127507515
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Entry
127507515 CDS
T08802
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04020
Calcium signaling pathway
cide04080
Neuroactive ligand-receptor interaction
cide04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127507515
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127507515
04082 Neuroactive ligand signaling
127507515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127507515
Ion channels [BR:
cide04040
]
Ligand-gated channels
Glutamate (ionotropic)
127507515
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
127507515
NCBI-ProteinID:
XP_051740647
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All DBs
Position
3:complement(20027784..20099717)
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AA seq
1400 aa
AA seq
DB search
MGVHLGCLSDTLWLPLLLLLSVCSAPRCQCRPFGMVEPTVNVAVVFSGSAYQLEIKGRLS
RENFLDLPLEVNPITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFI
STQTAVPIVGISGGSAVVLPHKGDGSTFLQLGSSMEQQINGMFKMMEEYNWDSFVVVTSL
YPGYDTYVDYIRSFIDTSYFLWEMQDILTFDMSADGMNDLRARRLLQQIDAQVLLVYCSH
DEAQYLFTMAREVGLVGPGYIWFIPSLAVGNPNMSPPDSFPIGLISIITDRWKMSLRNRV
RDGVAIVVKAVESFRKQRGFIPDGHMDCQSPVRPSTNDSLYRHMLNVSWENTDFSFNSDG
YLINPSMIIITLDRGRQWDKVGNYEYGILQTRYPVWPRYGTFMEPVSDNRHLTVATLEER
PFVIVEAVDPVTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIK
FSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAK
DPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWK
RPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSVHKSERLDFLLAISRGIYSCFNGVEDTDRKGSMQNPDVTTSYTQ
ANMLKMLQTAKDIVSSARVENSLDNATKTIENWSRRDPESARPSLPTCLIGTDFSHSRLP
CIASVTDNHSPYPQNVDSTTQHLLEKPHVGTRPTSLRYTLPARTSHHHIYERTLPISSLS
SPHIAIRDPPPPTAPKPHVYVDQSCHHPTSRYVSYRDFQVPDIFVEHQEPSGSHSQYMAG
LGRKKRSHSYVATSPETRRRGDYDVPQSCLAELKSNHLVENHSHTTPCMRSHFQRPSSSC
NSCTKLYLEPEMDDVPLLGKDKMNRRASFLRATWGGDRIRQLDEKPSTSASSTSCINMPD
LFPRVVVTNPKPSKMYGSAGNNLRYNMAVEPAYLDPAHMGSFPYKQHKLKYSKSIRLPSY
REAILQNTAALRRSSSTLVHGHYSTYLNSYTDLPVYRCPLPQGSTHFHENSKDMCHLFPC
VNHCPDNAALVPRLGSRPVLYQNTAIGSYEGAGRSNEESLHTVPFSSVRRDRRQVLVARN
VHSPYAPRPWGRVSSLESEV
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcatctaggctgtctcagcgacacactgtggctgccgttgctgctgctgctg
tctgtctgctccgccccccgctgccagtgccgaccgttcgggatggttgagcccaccgtg
aatgtggcggtggtgttcagcggctctgcctaccagttagagatcaaagggcgactgagc
cgggagaacttcctggacctgccgctggaggtgaaccccatcactgtgctggtgaacaac
accaacccgcgcactctactgacgcgcatctgcgacacgctggctgctaacagggtgcac
ggggtggtctttgaagataacattgggtccgaggccgtggcacagatcctggacttcatc
tccacgcagacagccgtgcccatagtgggaatcagtgggggatctgccgtcgtcctgcct
cacaagggtgacggttctaccttccttcagctgggctcttccatggagcagcagatcaat
gggatgttcaagatgatggaggagtacaactgggacagtttcgtggtggtgacgagcctg
tatccaggctacgacacctatgtggactacatccgctcctttatcgatacgtcttacttc
ctctgggagatgcaggacatcttgacgtttgacatgtcggccgacggcatgaacgacctc
cgtgctcgccgattgcttcagcagatcgatgcgcaagtgctgctggtgtactgctcgcac
gatgaggcccagtacctattcaccatggccagggaagtgggtttggttggtccggggtat
atctggtttatccccagtcttgcggtgggaaaccccaatatgtctcctccagacagcttc
cccattggattgatcagcattatcacagatcgctggaagatgagcttgagaaacagagtc
agggatggtgtagccatcgtcgttaaagcagtggagagcttccgcaagcagagagggttt
attcctgatggacacatggattgtcagagtccggttcggccatccaccaatgacagtctc
tacaggcatatgctgaacgtgtcgtgggagaacacagacttttccttcaacagtgatgga
tatctgatcaacccttccatgattataatcactctggaccgtgggagacagtgggataag
gtggggaattatgaatatggtatcctgcagacgaggtaccctgtttggccacgttatgga
accttcatggagcctgtgtctgacaaccgtcacttgacagtcgccacactggaggaaagg
ccttttgtgattgtagaagctgtggatcctgttactggcacctgcctcagtaacaccgtc
ccctgtagacggcagtcgaacaagacagaaacgatagtcggacacactgagccatacacc
aaactatgctgcaaaggcttctgcattgacatccttaaaaagctctctcgcaacatcaag
ttctcctacgacctctacctggtcaccaacggcaaacatggcaagctggtacgagggatc
tggaacgggatgatcggagaggtattttataagcgagcggacatggccattggctctctg
accataaatgaggagcgctctgagatcattgacttctctgtgccatttgtggagactggc
atcagtgtgatggtggccaggagcaatggaaccgtgtctccttcagccttcttggagccc
tacagcccagcagtgtgggtgatgatgtttgtcatgtgtcttacagtcgtggcagtgact
gtgtttgtgttcgaatactttagtcctgtgggctacaaccgcagcctggtcagtgccaaa
gatccaggtgggccgacattcaccatcgggaagtcagtctggctgctgtgggggatcgtc
ttcaacaactcagtgcccattgaaaaccccaaaggcaccaccagtaagatcatggtgctg
gtgtgggctttctttgccgtgatcttcctggccagctacacggccaacctggcagccttc
atgatccaggagcagtacattgacactgtttctggactgagtgacaagaagttccagaaa
ccgcaagaccaatatcctccattccggtttgggactgtgcccaatggcagcacagaacga
aacataaggagcaattatcccgaaatgcattcccacatggttaagtacaatcaaaaaggt
gtggaggatgctctcaacagcctcaaaactgggaagctggatgccttcatatatgatgca
gctgtgcttaactacatggcgggtaaagacgaagggtgtaaattggtgaccatcggtagc
gggaaggtttttgctacgacaggctacggcatcgcccttcagaaagaatctcgctggaag
cgccccatagacctcgctcttctccagttccttgctgacggtgacactcagaagctgcag
acagtgtggctcactggtatctgtcgtaacgagaagaaagaggtgatgagctctaagctc
gacattgacaacatggccggagtgttttacatgcttctagtggctatgggtctcagtctg
ctggtctttgcatgggaacatctactgtactggaagctacggcattctgtccacaagtct
gagcgtttggacttcttgctggctattagcaggggaatctacagctgcttcaatggtgtg
gaagacacggaccgtaaagggagcatgcagaacccggatgtcaccaccagttacactcag
gccaacatgctgaagatgctccaaactgctaaggacattgtctcatctgcaagagttgaa
aactccctggacaatgccacaaagaccatagagaactggagtcgacgtgatccagagtca
gccagacctagtcttcctacctgcctcataggaacggacttcagccatagtcgcctgccc
tgcatcgccagcgttacggacaaccactcaccataccctcaaaacgtggacagcaccact
cagcacttgctggagaagcctcatgtgggaacacggcctacctcactgcgctacactctt
cccgcacgcaccagccaccatcatatctacgaaagaacactgcccatatctagcctcagt
agtccccatattgccatcagagacccacctcctcctacagcccctaaaccccacgtgtac
gtcgaccagtcctgtcaccaccctacctctcgctacgtctcttaccgtgactttcaggta
ccagacatctttgtggaacaccaagaaccttcaggaagccattcacaatacatggctggt
ctgggtcgcaaaaagaggtcccacagctacgtagcaacatctccagaaactcgacggagg
ggcgactatgatgttccccagtcctgtctggctgagcttaaaagcaaccaccttgtggaa
aaccattcccataccacaccctgcatgagaagccacttccagagacccagctctagctgc
aactcctgcaccaagttgtatctagaaccggagatggatgacgttcctcttctggggaaa
gataaaatgaaccgtcgcgcctcttttctcagggccacgtggggtggtgacaggatccgg
cagctggatgagaagccctccacctctgcatcttctaccagttgcataaacatgcctgat
ctgttccctcgagtggtcgtgaccaatcccaagccttcgaagatgtatggcagtgctggt
aacaaccttcgctacaacatggctgtggagccagcctatctggacccagcccacatgggc
tcctttccgtacaagcagcacaagctcaagtactcaaagtccatccgccttccttcgtac
cgggaggcgattctacagaatacagcggccctgcggcgctcctcttccacattagtgcat
ggacattactcaacgtacctgaactcttacacagacctgccggtgtaccggtgtcctcta
ccacagggatccactcactttcatgagaattccaaagacatgtgccacctgtttccatgt
gtcaaccattgcccggataatgccgccttggtgccccggttaggcagcagacctgtattg
taccagaacactgctattggaagctacgagggggctgggcgctcaaacgaagagtcgttg
cacactgtgccgttctcttccgtacgcagggaccgcaggcaggttctagtggcacggaac
gtacacagtccctatgccccacggccctggggtagggtatctagtctggagtcagaggtt
tga
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