Ctenopharyngodon idella (grass carp): 127507589
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Entry
127507589 CDS
T08802
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04260
Cardiac muscle contraction
cide04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127507589
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
127507589
04261 Adrenergic signaling in cardiomyocytes
127507589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127507589
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127507589
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
dCache_1
VWA
VWA_2
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
127507589
NCBI-ProteinID:
XP_051740770
LinkDB
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Position
24:15995506..16034404
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AA seq
1103 aa
AA seq
DB search
MWPLKIDVSIMCHIRGSSWVTFLMVYTGWLCIFTHAQMKIPPETVQKWAITISEQINAIA
SKYSGAALLQKKLKDVEPIIRIEDVDGSRLVLEFAEEIERMLGSKMKSVKRLADTAEDAD
LYHEFNASLQFDYFNALLVNTMDEEGNFIELGGEFPLEENEHFNKLSVNTLMSDIQVPTN
VYNKDPDILNGVYMSEALNDIFISNFQKDPTLTWQYFGSSTGFFRLYPGIKWTPDSNGVV
SFDCRNRNWYIQAATSPKDIVIVVDVSGSMKGLKMTIAKHTINTILDTLGENDFVNVIAY
TDYVRYVEPCFKGTLVQADLDNREHFKLLVDELHVKGEAKVKKAMKESFRVLADARANGQ
GSLCNQAIMLITDGAMEDFQSVFEEFNWPDRKVRVFTYLIGRDMTFSENVKWIACNNKGY
YTHVSTLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDSVLPNTKELFKSKAHSLLL
MTSVAMPVFSKKKETLSHGILLGVVGTDVPLLEVMKLAPRYKLGAHGYAFLITNNGYILA
HPDLRPLYSDGKKLKPKPNYNSVDLSEAEWEDTEDSLRTAMVKGETGTLALDVRAAVDKG
KRPLFLKNDYFYTTINETPFSFGMVLTRGHGQYMFFGNVSVEEGLHDLQQPDLSLADEWT
YCETDIDPHHRKLTQLQAVVRYLTGKEPDLECDEILLQQVLFDAVVTAPLEAYWTALTLS
GPGVDEGMESAFLGTRSGLMRVIRYAGSEKRVGKKFLTRVDKENLFTVDHFPIWYRLAAE
NKPGQFLFYVPHDDINKGRNTFVAVTSVTVTEGKRTAIAGAIGMQASLDLLERVLFSIAK
QPNNTDCSDVDGICPLSCESIDVNCYLVDSNGFILVSKDRGDVGKFFGEIDGSVMAQLLK
TGLYKRVTLYDYQAMCKNAHHHTSGARPLLSPFYGLLAIIKWFFSHFVMFLLEFNICGLW
HSDYVVDAHKQKKVELMQPCNTEYPSFMYDSSIRETNSIIKCGRCQKMFVLQQVPNSNLV
MLVVQADCDCSRQYAPITLMPKEVKYNATVKCNRMKSQKIRRRPESCHAYHPHENAKDCG
GACSIAVSLTLYFICLAISLALH
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgtggcccttaaagattgatgtcagcatcatgtgtcacatcagagggtcttcttgggtc
acattcctaatggtctacacaggttggctgtgtatctttacgcatgctcaaatgaagatt
ccacctgaaacggttcaaaaatgggccatcaccatttcagagcaaatcaatgccattgca
tcaaaatattcaggagctgctctattacaaaagaaactcaaagatgttgagcccatcatc
agaatagaggacgtggatggatctcgattagtgctggaatttgcagaagaaatcgagaga
atgcttggcagcaagatgaagtctgtgaagaggctcgcagatacagctgaggatgccgac
ttgtatcatgagtttaatgcatctttacagtttgactactttaatgcattattggtgaat
actatggatgaagagggaaatttcattgaacttggaggcgaatttccattggaggagaat
gaacatttcaacaagttgtcagtcaacactctaatgagcgacatccaagtcccaactaat
gtctacaacaaagatccagacattcttaatggagtgtacatgtcagaggccttgaacgac
atctttatcagtaacttccagaaggatcccacgctcacttggcaatattttggcagctca
acgggcttctttagactctatccaggaatcaaatggacccctgattctaatggcgttgtt
tctttcgactgcagaaacagaaactggtatatccaggctgccacctctcctaaggacatc
gtcattgtggttgatgtcagcggaagcatgaagggtctgaaaatgaccattgccaaacat
accatcaacactatcctggacacgctcggggaaaatgactttgtcaatgttattgcatac
actgattatgtccgctacgtggagccctgttttaaaggaacgttggtgcaggcagacttg
gacaaccgcgagcatttcaagctgcttgtggatgaactccatgtaaagggggaggctaaa
gtaaaaaaagccatgaaggagtctttccgcgtcctcgctgacgccagagcaaatggtcag
ggcagcctatgtaaccaagcaattatgctgatcacagacggagccatggaagatttccag
tcagtgtttgaagagttcaactggcctgacaggaaggtacgggtttttacttaccttatt
ggcagagatatgaccttctcagaaaacgtcaaatggattgcctgcaacaacaagggttat
tatactcacgtctctacactggctgacgtacaggagaacgttatggagtatcttcatgtt
ctgagtcgaccaatggtcatcaaccatgaccatgacataatctggaccgaggcatatatg
gacagtgttcttcctaacactaaagagctgtttaaaagcaaggctcacagtcttctgctc
atgacgtcagtggctatgccagtgttcagtaagaagaaagaaacgctttctcatggcatt
ctgctgggagtggtgggaactgacgtccccctgctggaagtcatgaaacttgccccgcga
tataagcttggagcacatggttatgccttcctcatcacaaacaatggatacatcctggca
catcctgatttaagaccactgtacagtgatgggaagaagttgaaacctaagcctaactat
aacagtgtggacctgtcagaggcggagtgggaggacactgaggacagtttgagaacagct
atggtgaagggagaaactggtactctggctttagatgtgagagcagctgtggataaaggg
aaaaggcctttgtttctcaaaaatgattatttctacacaactatcaatgaaactccattt
agctttgggatggtgcttacgagaggtcacggacagtacatgttctttgggaatgtttcc
gtagaggagggtcttcatgaccttcagcagccagacctctctctagcagatgaatggacg
tattgcgagaccgatattgacccacaccaccgtaagctcactcagctccaggctgtggtt
cgatacctgactggaaaagagcctgacttggagtgtgacgagatactgctacagcaagtt
cttttcgatgcagtggtaacagcaccactggaggcctactggacagcgctaacgctatcc
ggccctggcgtagatgaaggcatggagtcagctttccttggaacccgctctggccttatg
cgtgtgatcagatatgcaggaagtgagaaacgtgtgggaaagaagttcttgacccgtgtg
gacaaagagaacctcttcacagtggaccactttcccatttggtatcgcctggcagctgag
aacaaacctggtcaattcttattctatgtcccacatgatgatataaacaaaggcaggaac
acttttgtggcggtaacatctgtgacagtgactgaagggaaaagaacagctattgctgga
gctattggaatgcaagcatccctggacctgctggaaagagtgttattttcaattgccaaa
caaccaaacaacacagattgcagtgatgtggacggtatatgtcctctcagctgtgagagc
atcgatgtcaactgttaccttgtcgacagtaatggcttcatactggtctcaaaggacaga
ggagatgttggtaaattcttcggggaaatagatggatctgtcatggcccagttactaaaa
actggcttgtataaaagggtgactctgtatgactaccaggccatgtgtaagaacgcccat
catcacactagtggagctcgaccacttctcagccctttctatggtctgctggcgataata
aagtggttcttctcacattttgtgatgtttctgttggagttcaacatctgcggactttgg
catagcgactatgtagtggatgcacacaaacagaagaaggtggaactaatgcagccttgt
aacacagagtatcccagcttcatgtatgactcatccatcagagagaccaacagcatcatc
aaatgtggccgctgtcagaagatgtttgtcctacagcaggttcctaacagcaacctggtc
atgctggtggtccaggctgactgcgactgctcccgacagtacgctcccatcacactaatg
cccaaagaagtcaaatataatgccacagttaagtgcaacaggatgaaatctcagaagatt
cgcagacgacctgagtcttgtcacgcataccatcctcatgaaaatgccaaggactgtggc
ggagcatgcagtatagcagtatctctcacactgtacttcatatgtctggctatctcattg
gccctccattga
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integrated database retrieval system
