Ctenopharyngodon idella (grass carp): 127507634
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Entry
127507634 CDS
T08802
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
127507634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127507634
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127507634
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127507634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4
zf-C3HC4_2
zf-RING_10
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
127507634
NCBI-ProteinID:
XP_051740861
LinkDB
All DBs
Position
24:9751654..9761505
Genome browser
AA seq
1063 aa
AA seq
DB search
MEKGRWSSEDAPRASMPDELSHPKFSEWKFKLFRVKSMEKAPLSNETPVEKENQPEVEIE
MAGSPGSVMKLCFGGKSKENVENTRGRVDLKLQEIDTHMNLLKSLCRLCGLSIRKAKGPS
HEVQGDLEESSRCALRKMGCKFVTWPEVILKVFKVDVTTDMETVHPSLFCHRCWTAAMRG
GGFCSFTRTHIPDWKPHTSHCNLCFPKKSSFQRMGRKRAKPLKGAHSLPKRIKRDSPETS
GANRLWRQSTENPAGSGGKEWLKLSVQRGQWVKNITQCQKDHLSAKLIPPEVPADLLRAV
ICQVCDHLLSDPVQSPCRHLFCRVCIVRYSRALGPNCPTCNQHLNPSHLTRPAKFFLATL
SSLPLLCPSEGCSDWVRLDSFREHCLNHYHEKESKEEQTPSEQNLNGYLPINKGGRPRQH
LLSLTRRAQKHRLRDLKNQVKMFAEKEEGGDVKSVCLTLFLLALRAGNEHKQADELEAMM
QGRGFGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRNAEKELLPGFH
QFEWQPALKNVSSSWDVGIIDGLSGWTTFVDDVPADTIARRFRYDVALVSALKDLEEDIM
EGLRERGLDDSMCTSGFTVVVKESCDGMGDVSEKHGTGPAVPEKAVRFSFTIMSISIRVE
GEDDGITIFQEQKPNSELSCRPLCLMFVDESDHETLTAILGPVVAERKAMTESRLIVSVG
GLLRSFRFFFRGTGYDEKMVREMEGLEASGSTYICTLCDSTRAEASQNMVLHSITRSHDE
NLERYEIWRTNPFSESADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKIFQDEI
GEVYQRSNPSREERRRWRSTLDKQLRKKMKLKPVMRMNGNYARRLMTREAVEAVCELVPS
EERREALRRLMELYLQMKPVWRSTCPSRDCPDQLCQYSYNSQQFADLLSTTFKYRYDGKI
TNYLHKTLAHVPEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTYELEDVLKHHW
LYTSKYLQKFMEAHKNSEKAMQATFNPEETPDEVDVTLEVPDF
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagggaggtggagttctgaagatgctcccagagcctccatgcctgacgaactg
tctcatcccaagttttcggaatggaagtttaagctctttcgggtcaagtccatggagaag
gcccctctgtctaatgaaacaccggtggagaaggaaaaccagcctgaggtggagatagag
atggcaggctctccaggcagtgttatgaagctctgttttggagggaagagtaaggaaaat
gtggagaatactcgagggagagtggaccttaagctgcaggagattgatacacatatgaat
cttctcaaaagcctgtgtcgcctttgtggcctctcaatacggaaggctaaaggtccgtcg
catgaagtccaaggagacttggaagagtccagtcggtgcgccttgcgcaagatgggctgc
aagtttgtgacttggccggaggtgatcttgaaggtcttcaaggtggacgtgacaaccgac
atggagacagtacatccatctttgttttgtcacagatgctggactgctgccatgagggga
gggggtttctgttctttcactaggacccatatcccagactggaagccccatacttcccac
tgcaacctctgcttccctaagaaaagctcttttcagcgaatgggaaggaagcgggccaaa
ccacttaaaggtgcacacagccttccaaagagaatcaagagggattccccagaaacttca
ggtgccaatagattgtggagacagtccacagagaatcctgcggggtcaggtgggaaagaa
tggttaaaactatcagttcagagaggacaatgggtaaagaatatcacacaatgccagaag
gaccatctgagcgctaagctcatccctcccgaagtcccagcagacttgctacgtgccgtt
atttgccaagtgtgtgatcacctgctttccgaccctgtccagtcaccgtgtcggcacctg
ttctgtcgggtctgcatagtaaggtacagtcgagctttgggcccgaactgtcccacctgt
aaccaacacctgaacccatcccacctgaccaggccagccaagttcttccttgccaccctt
agctctcttcctctgctctgccccagcgaaggatgcagcgactgggtccgattggactcc
tttagggaacactgcctcaaccactaccatgaaaaagagtccaaggaagaacaaacacct
tcagagcagaatctcaatgggtacttgccaatcaacaaaggtgggcgccctcgacagcac
ctgttgtcgctgacccgtcgggctcaaaagcacaggctgagagacttaaagaaccaggtg
aagatgtttgccgaaaaggaagaaggaggggatgtgaagtctgtctgtttgacgctcttc
cttctggcgctgagagccgggaatgaacacaaacaagcagatgaactggaagctatgatg
caaggcaggggatttggtctgcatcctgcagtgtgtttggctataagggtcaacaccttc
cttagctgcagtcagtaccacaagatgtaccgcactgtgaaggccactagtggccgccag
atattccagcccctgcacactctacgcaatgctgagaaagagcttctccctgggttccac
caatttgaatggcaaccagctttaaagaacgtttccagctcctgggatgtgggcatcatt
gacggcctctctggttggacaacctttgttgatgatgtccctgcagataccatcgccaga
cgattccgctacgatgtggcactggtttctgcattaaaagacctggaggaggacataatg
gaaggactaagagagagggggctagatgacagcatgtgcacctctggctttactgtggtg
gtgaaagaatcatgtgatggtatgggagatgtcagtgagaagcatggaactggtccagcg
gttcctgagaaggcagtgaggttttccttcacaatcatgtccatctccatccgagttgag
ggtgaggacgatggcatcaccatcttccaggaacaaaagccaaactctgagctctcttgt
agacctttgtgcctcatgtttgtggatgagtccgaccacgagaccctgacagccatcttg
ggacctgtggtagcagagcggaaagccatgacggaaagtcggcttatcgtatctgttggt
ggtctgctacgctcatttaggttcttcttccggggcacaggctatgatgagaagatggtt
cgtgaaatggaagggctagaagcatcaggctccacttatatatgcacactctgcgactca
acccgagccgaagcctctcaaaacatggtgctacattccatcacacgtagccatgacgaa
aatcttgagcgctacgagatctggaggacaaatcctttctcagagtctgctgatgaactc
cgtgaccgggtcaaaggtgtttccgccaagcctttcatggagacccagcctactctggat
gccctgcactgtgacataggcaatgcgactgaattctacaagatctttcaggatgagatc
ggcgaagtctaccagaggagcaatccgagtcgagaggaacgccgtcgttggcggtcaacc
ctggacaagcagctaagaaagaagatgaaactcaagcctgtgatgaggatgaatggaaac
tatgcgcgtcggctgatgacacgcgaggctgtggaggcggtctgtgaactggtcccttcc
gaggaacgacgtgaggcactacggagactgatggaactctaccttcagatgaagccggtg
tggcgttccacctgtccatcccgagactgccctgaccaactctgtcaatatagctacaac
tctcagcaatttgctgacctcctttccaccacgtttaagtaccgctacgatggaaaaatt
accaactacctccacaagacgctggcccatgttcctgagattgttgagagagacgggtct
atcggagcatgggccagtgaaggcaatgagtctgggaacaagctgttcagacgttttcgg
aagatgaatgcaaggcagtccaaaacgtatgaacttgaagatgttctgaaacaccactgg
ctgtacacctccaagtatcttcagaagtttatggaggctcacaagaattcagaaaaagca
atgcaagccacattcaacccagaagagaccccagatgaagttgatgtcacacttgaagtt
ccagatttttga
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