Ctenopharyngodon idella (grass carp): 127507849
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Entry
127507849 CDS
T08802
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cide00535
]
127507849
04091 Lectins [BR:
cide04091
]
127507849
Proteoglycans [BR:
cide00535
]
Cell surface proteoglycans
Others
127507849
Lectins [BR:
cide04091
]
C-Type lectins
Others
127507849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Dynein_IC2
Motif
Other DBs
NCBI-GeneID:
127507849
NCBI-ProteinID:
XP_051741238
LinkDB
All DBs
Position
24:7877340..7941488
Genome browser
AA seq
2304 aa
AA seq
DB search
MSALCPLLSVLFPALLYLLQTVHGASYFGDSYCRIDVTQDLSSFQVSLQFKTGRRSGLLL
LAAGHRDYLSLELYNGRLQARIDMGSGEKVLASSMGLQLSNLLDHHVSLILKDSKLTMAV
DNLYTTFIPMEGTDEDLNIDQGVFLGGVRDLEVEYLSTAVPSLRGCMSNVVFESYDFDIL
ATAAPVCYDTKETCSSEFEAGDGDTTSFISPDSFISFPTWTRPSSNSRSLEMIMKTTIED
ALLLFHPGYQADFIAIGMAGGFLKGVIDLGSGMYVLDNVKVKVDDDQWHRVTIQIDPNKF
QINVDSQLVSVPLNETENLDLVGNLYLGGIQRKMKDVFQDDFLTRVEEEITTESFIGCLG
EIKVNQKGRSLQDALITKDIHVKCEGEYDYSTYDDDLEPTTSPPVRITYVDFNADERHCF
PTEDLPEMFHNVSKLLDITPLLVPEGGEAIVDILNLNPTFNLNSAGVRQSQIIFTLLNNP
WYGQIDMNSRHSKKFTLLDVANKKIKYLHDGNEKYGDQIQLEVIAHGTNLPECLSVARQY
VLPVEIIPVNDIPQLSAGVISITANGRTRLSPNLIKISDSDNRCDELKVTVTSDPTSAGY
LENAQQPGFGLREFTCRQLKEGNIYYIHRGGEVPGLTLQVSDGDLVSQSSTFKLLITQPQ
ISLVTNTGLVITQDSSAPIGIQNLAISATPKTGDVVYNITQPLLFGELQLISDNGVPKRV
TLFHQSDLEQNRLKYIPNLTADHNSIETEFIHFSAQLGQVILPDNRFIIKIMPAILGIAK
MVPLEVEDGQQKVIKPEQLQAFVRIDQTDSRTVQYMILKCPAQGVLMRLDKDLSEGDTFT
QQDILNGFISYSPRVRRAVDSEDQFQFKVFAKDQYSREYTFPIKIKADSNAPVLTNERLV
VLEGKENIINKEYLWVQTSTSTDFVYRITQDPKHGRLIRDSPPGEQRFEGAIRVFSNEDL
SLNRLIYKHDGSKTSHDQFNFLAFDSRGGNGGQDEGHEVLKGVFNIAIQSRNEHEPQRII
HKPFNVVRNGQRLLTTDDILYIDDDSDFNDTQLVYARVGILSGNIVSSVDPTQPLYRFTQ
ADLRDRKVLFVHHGADRERFQLQVSDGLHKTTAVLQVQAGDPYLHVANNTMVVMDHGSTK
TLNTSLLSAETNMDIRSAAEIIYDVTSAPSDGRIIVSGIESSTFTQEDLTKGVVSYEHND
QSLSSKDSFAFSVHAKGWSTQGTFKIKIFKQGYLSEPQIVSNKVVIAYEGEHSVIDQTHL
KVEQTDILPKEMVYSVKDFPRLGHVVKLNNDSDSTASHVLDYIQSFTQEDINRGRILYVS
ASLQGRDHFTADVSNGFTTVEDLEVQVDIVPRIIPVQVVNLTVREGGSVALTQEVLNITH
PYYRSINIEFYMEEAPQHGDIKYLEEEDGLDTFSWEDVQQGQVYYHHDSSETTEDSFTLM
ASAFDITRRSASLIVGITVIPVNDEPPRIQRNTGLELLVGEESEITANMLSSDDLDTPPE
ELVYSIEKPSNGIVAFKVSSHDSVDSFTQAQINNGEVLFIHQGSESGGFSFTVTDGEHTS
PLYHFAVKARQLTITMETEGELMVFPGTRQVISGDILRAITSEDGDEITYSLVKPPRLGR
IIKPNQLGQFEEITKFTQTELDAGAVYYEHQMPPEPFWVLKDSVELSLTSPPATELQHSL
PVTVSYYAANRNVSSQLWKNKGVSVVQGQSKVIDKSVLDASNLLASLPDQKRKGQDIVYE
VRRFPVHGRLTLGGSDLPRDAPHFLQDDVARGDLEYYHDDSGASSDSFSFRVHLNPSGRT
PQVQPGAVVLEEIFLISIRRRDSNPPELASLDLLLEALQGSTTIISKNYLNTVDQDSTPD
EVRFTISKSPANGYLIYTDNGDRINQFSQEDINTGRVAFVSDGSLSDGFMEFIVSDGKHQ
TNPYTLHIGILARSLILNKAPEIHVRQGDDETLITEDMLNTSTGGPVEEEVLYKITNVPK
YAAVMVDRQPTSAFTQKQIKQGRVSVRFVKSTSPRDTVAFVARSRAANVSSVLNITVKPL
AKVAQNPVLPRGATVLVDRKLLDATPLANKTRTSPTFSMIQQPQGARFIKRGGPDDGQPV
SSFTQRDLDEGRVALEILNTTGGQNAGSQSQDEARFLLKAHGVPPAECVLPFHVVPYDPS
RVYGATLLKVPPVSVSDKSDAGQPEPRWREDGDVTPGSTGATPVVSRRNTLWAILIPILV
ILLLMLLAALLVYYLVRRNKTGKHNVQTVAAKPKNGEVSQETFRKTDPANNIPMSNMDSK
GADPELIQHCRTTNPALKKNQYWV
NT seq
6915 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccctgtgtccgctcctgtctgtcctctttccggcactgctatacctgctccag
actgtccacggagcttcctattttggggacagctactgtcgaatagatgtcactcaggat
ctgtcaagttttcaagtgtcgctccaatttaaaacaggcagacgaagcggtctgctccta
ctggctgcgggacacagagattacctctcgttggagctctacaatggcagattacaggct
aggattgacatgggatctggagaaaaggttctggcctcctccatgggtctccagctcagt
aaccttctggaccatcatgtgtctctcattctgaaagactccaaacttactatggctgtg
gacaacctgtacacaaccttcatcccaatggagggtacagatgaggacctgaacattgac
cagggcgtgttccttggaggcgtgagagacctggaagtggagtacctgagcacagctgtg
ccctccctgcgtgggtgcatgagcaatgttgtatttgagtcttatgacttcgatattcta
gctacagcggctccagtatgctatgacaccaaggagacctgcagcagcgagtttgaggca
ggggatggagacaccacaagctttatcagcccggactcattcatctctttccctacttgg
accagacctagctcaaactcccgtagtctggagatgattatgaagacgaccattgaggat
gctttgttgctcttccacccaggataccaggcagacttcattgcaattggaatggcagga
gggttcttgaaaggtgtaatcgacctgggaagtgggatgtatgtgctggacaatgtgaaa
gtcaaagtggatgacgatcagtggcacagggtaaccattcagattgaccccaacaagttc
cagataaatgtggacagtcaactggtttcagtccctcttaatgagacagaaaacctggat
ctagtggggaacctatacctgggaggcattcaaaggaagatgaaggatgtgtttcaagat
gactttttaactcgtgtggaggaggagatcacaactgagtcctttattggatgtttagga
gaaatcaaagtgaatcagaaaggcagaagcctgcaggacgctctgataactaaagacatt
catgtgaaatgtgaaggggaatatgattactccacttatgatgatgatttggagccaaca
acttcgcctccagtaagaataacatatgttgatttcaatgctgatgaaagacattgtttc
cctacagaggacttaccagaaatgttccacaatgtttccaagcttctggacatcactcct
ctgctagttcctgagggaggagaagccattgtcgacatactaaacctaaacccaacattt
aacctaaactctgcaggtgttcgtcaatctcagatcatctttactctgctaaacaatccc
tggtatggacagattgatatgaactcaagacactcaaagaagtttacccttctggatgtt
gcaaacaagaaaatcaagtatctccacgatggcaatgaaaagtatggagatcaaatccaa
ctggaggtcattgcacatggaacgaatctccctgagtgcttgagtgttgcacgccaatat
gtactaccggtggagatcatccccgtcaatgacatccctcagctcagtgcaggtgtcatc
tcaatcacagctaatgggcgcacacgtttaagtccaaacctcatcaaaatctcagactca
gataatcgttgtgatgaacttaaggtcacagtcacttcggaccctacctctgctggatat
ctggagaatgctcaacagccaggatttggtctaagagagttcacctgtagacaactgaaa
gaaggaaatatctactacattcacaggggaggagaagtgcctggacttaccctgcaggtt
tcagatggagatttggttagccagtcaagcacatttaaattgctcatcacacagccacag
attagtctggtcacaaatactggcctcgtgatcactcaggatagcagtgctcctattgga
atacaaaatctggccatttctgcaactccaaaaactggagatgttgtttataatatcact
cagccacttctatttggagaactgcagttgatatcagacaatggggtaccaaaaagagtc
acactatttcatcagtctgatctggagcagaaccgactgaaatacattcccaacctcaca
gctgatcacaacagcatagaaaccgagtttattcacttcagtgcacagctcggacaggtc
attctcccagacaacagatttatcatcaagatcatgcctgccattttgggaatagctaaa
atggttcctctggaagttgaagatgggcagcaaaaggtcattaagcctgagcaattacaa
gcttttgtgaggatagaccaaactgattcaagaacagtccagtacatgattctgaaatgc
ccagcccagggagtcttgatgcggcttgataaagacttgtctgagggtgatacctttacc
caacaagacattttgaatggtttcatcagttacagccctcgtgtccgcagagcagttgac
tctgaggatcagttccagttcaaagtatttgcaaaggatcagtactccagagaatacacc
ttcccgatcaaaatcaaggctgattctaacgctcctgtcctaaccaacgagagacttgtt
gtgctggaaggtaaggaaaacatcataaataaagaatatctctgggttcaaacctccact
tcaacagactttgtgtacagaataacacaagatcccaaacatggtcgtcttatcagagac
tctccacccggtgagcaaagatttgagggtgcaattcgggtctttagcaatgaggatctt
tctttgaacaggctgatttacaaacatgatggatcgaaaacaagccatgaccagtttaac
tttctggcatttgattcaagaggtggcaatggtggacaagatgagggtcatgaggtactg
aagggagtgtttaacattgcaatacagtccaggaatgaacatgaacctcaaaggataatt
cacaaaccttttaatgttgtcagaaatggccagcgtttattaaccactgatgacattctg
tacatagacgatgactctgactttaatgacacccaactagtttatgcgagagtgggaatt
ctttcaggaaacatcgtctcctcagtagacccaacacagcctctctaccgctttacccag
gctgacctgagggacaggaaggttttgtttgttcaccatggggcagatcgtgagcgattc
caacttcaagtatctgatggtttgcacaagaccacagctgtacttcaggtgcaagcaggt
gacccttatctacatgtagccaacaataccatggtggtcatggaccacggtagcaccaag
acactgaacaccagtctgttaagtgcagagaccaacatggacatcagaagtgcagctgag
atcatttatgatgtgacttctgctcccagtgatggtaggattatagtcagtggaattgaa
tcttccacatttacacaagaggacctgactaagggtgtggtttcctacgaacacaacgac
cagagccttagctcgaaagattcctttgccttcagtgtgcacgctaagggttggtccaca
cagggcactttcaagattaagatattcaagcaaggttacctgtcagagccgcagattgtg
tcaaacaaggtggtcattgcatatgaaggggagcactctgttattgaccaaacccatctg
aaggtggagcagacagacatcctgcccaaagagatggtgtactccgtcaaagactttcca
cggttgggtcatgtggtcaaactcaacaatgactcggacagcacagcatcacacgtgctg
gactacattcaatccttcacgcaggaggacataaaccggggtagaatcctttacgtctcc
gcctccctgcagggccgggaccacttcacagccgacgtcagtaatggtttcaccactgtg
gaagatctggaggtgcaggtggacattgttccacgcatcatacccgtccaggtggtcaac
ctcaccgtgagggagggcggatccgtggcgctgacccaagaggttctgaatatcacacac
ccctactacaggtccattaacatcgagttttatatggaagaagcacctcagcatggagat
atcaagtatctggaggaagaagacggacttgacaccttctcctgggaggacgtacaacag
ggacaggtgtactaccaccacgacagcagtgagaccacagaggacagtttcactcttatg
gcgtctgcttttgacatcacccgccggagtgcttccctgatagtcggcatcaccgtcatc
cctgtgaacgacgaaccgcctcgcatccaacgcaacactggactggagctcctagttggc
gaggagtctgaaatcacagccaatatgctgagcagcgatgatctggacacccctccagag
gagttggtgtattcaatcgagaagcccagcaatgggattgttgcctttaaagtgtcttca
catgacagtgtggacagtttcacccaggctcagattaataatggagaggttttattcatt
catcagggctcagaatcgggtggtttcagcttcactgtgactgatggagaacacacttca
cctctctaccacttcgctgtcaaggcaagacagctcaccatcaccatggaaacggaggga
gaactcatggtcttcccaggcaccaggcaggtgatcagtggagatattttgcgggctata
acaagtgaagatggtgatgaaatcacatactcgctggtgaaacctcctcgcttgggacga
ataatcaaacctaaccaacttggacagtttgaagagatcaccaaattcacacagactgag
ttggatgcaggtgctgtgtattatgagcatcagatgccgcctgagcccttctgggtcctg
aaagattctgttgagctgtccctcacatcgcctccagcaacagagctgcaacacagcctg
ccagtcactgtctcatactatgcagccaatcgaaacgtctcttctcagctctggaagaac
aaaggtgtgtccgtggtgcaggggcagtctaaagtgatcgacaaatctgttctggatgcc
tctaacctgcttgccagtttgcctgatcaaaagcggaaggggcaggacatcgtctacgaa
gttcgtcggttccctgttcatggacgactcactctcggagggtctgacctgccccgtgac
gctccccatttcctgcaggacgatgtggcacgtggtgatctggagtactatcacgatgac
tccggagcatcttctgatagcttctctttccgtgtccatctgaaccccagtggccgaacc
ccacaagttcagcccggtgccgtggttctggaggagatcttcctgatctccatcagacgg
cgagactcaaacccaccagaactcgcaagcttggacctgcttttagaagcactacagggt
tccacgaccatcatctccaaaaactacctcaacacggtcgaccaggacagcacaccggac
gaggtccgattcactatctccaagagtccagctaatggatatctcatctacactgacaat
ggagaccggatcaaccagttcagccaggaagacatcaacactgggcgggttgctttcgtc
agcgatggaagtctgtccgatggcttcatggaatttatagtatctgatgggaaacaccaa
acgaacccgtacacactgcatattggaatcctggccaggtctctaatactgaacaaagct
ccggagatccacgtaaggcagggagacgatgagacactaatcaccgaggacatgctgaac
acctccactgggggtcctgttgaggaggaggtactctataagatcaccaacgtcccaaag
tacgcagctgtaatggtggacagacagccaacctcggctttcacgcagaagcagattaaa
cagggaagagtaagcgtccgtttcgtgaagtccacctcaccgagagataccgtggccttt
gtggcccgaagcagggcagcgaacgtgtcctcagtcctcaacattactgtgaaaccactg
gcgaaggtggcccagaatcccgtgctccccagaggtgctactgtacttgtagacagaaag
ttgttggatgcaacacctctggccaacaagaccagaacatctccaaccttcagcatgatc
caacaacctcaaggagctcggttcatcaagaggggtgggccggatgatggccaaccagtg
agctccttcacccaacgagacctggatgaaggacgggtagctttggagatcttaaacaca
actgggggtcaaaacgctggaagtcaaagtcaagatgaagcacgcttcctcctaaaggcg
cacggcgttcctcctgcagagtgcgtcttgcccttccacgttgttccttacgacccatct
agagtttatggcgccacactgctcaaagttccaccggtgtccgtttccgacaagagtgac
gcaggtcaacccgagcccaggtggagggaagatggcgacgtgactcctggcagcactgga
gccactcctgtggtgtctagacggaacacgctgtgggctatccttattcccatccttgtc
atcctcctactcatgctcctggctgcactactggtatactacttagtccgacgcaacaaa
actgggaagcacaatgtccaaacagtggcagcgaagcccaagaatggagaagtgagtcag
gagacttttaggaaaaccgatcctgcaaacaacatccccatgtcaaacatggactccaaa
ggggcagatcctgagttaatacagcactgtcggacaacaaacccagcactgaaaaagaat
cagtactgggtttga
DBGET
integrated database retrieval system
