Ctenopharyngodon idella (grass carp): 127508022
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Entry
127508022 CDS
T08802
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127508022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127508022
03036 Chromosome and associated proteins [BR:
cide03036
]
127508022
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127508022
Coactivators
SAGA/TFTC/STAGA complex
127508022
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127508022
STAGA complex
127508022
TFTC complex
127508022
SAGA complex
127508022
SLIK complex
127508022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_VPS8
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
DSE1_N
PAC11
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
ASA1
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_NOL10_N
Tricorn_2nd
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
eIF2A
WD40_like
PROPPIN
LisH_PAC1
LisH_TPL
Beta-prop_ACSF4
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
127508022
NCBI-ProteinID:
XP_051741506
LinkDB
All DBs
Position
1
Genome browser
AA seq
744 aa
AA seq
DB search
MAAVQDGPMDLDAEKETKPEILSDGTSNLSGNTGSGALSSSPLTAAPAGGAPKLEDQQTL
IAVLQFLKRNKLSESVDILRREAGLAEDLEDPQAADGSGGKDDGDGGDATSLLSRVSIAA
AAAPQSTLTPMPVKSAEDQPDVRVVLSAYSQQGDPSLYQVYYSDLKNFIESVLDCHRAEL
SQLFYPLFVHMYLELVYNNHENEAKAFFEKFSGDQECYYLDDLRVLCGLTKKEHMKGNEA
LLDFRTSRFVLRISRDSYQLLKRHLQERHNNQIWNIIQEHLYIDIFDGMPRSKGQIDSMS
GSLAGEAKREVNKAKVFYGLLKEPEIEVPLDDEDEEAENEEGKPKKKKTKKDSMGSKSKK
QDPNAPQQNRIPLPELKDSDKLDKIMYMKESTKRIRLSPENLPSICFYTFLNAYQGLTAV
DFTDDSSLLAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTASES
KILHGHSGPVYGVSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPF
GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSTDRTIRLWDV
LNGNCVRIFTGHKGPIHCLAFSPNGKFLASGSTDGRVLLWDIGHGLMIGELKGHTDTIYA
LKFSRDGEILASGSMDNTVRLWDSMKAFDEVETDDFTAATGHIHLPDNSQELLLGTYHSK
STPVTHLHFTRRNLLLAAGAYNSQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcaagatggaccgatggatctggacgcagagaaagagacaaagccagaa
atacttagcgatgggacgtcaaacctctcggggaacactgggagcggggcgctctcctca
tctcccctcaccgctgcccccgccggcggagccccgaagctggaggaccaacaaactttg
atcgcagtgttgcagttcctaaagcggaataaactgtcagagtcggtggatattctgagg
cgggaagccggtcttgcagaagacctggaggacccgcaggctgctgatggcagcggaggg
aaggatgacggagatggaggggatgcaacctctctgctcagccgggtgtctatcgcagca
gcagccgccccccagagcacgctgactcctatgccagtaaagagcgcagaagaccagccg
gatgttcgtgtggtgctgtcagcatacagccagcagggggacccctctctatatcaggta
tattacagcgacctgaagaacttcatagagtcagtgctggactgccaccgagcggagctg
tcccagctcttctaccctctgttcgttcacatgtacctggagctggtctacaacaaccat
gagaacgaagccaaggctttctttgagaagttcagcggtgatcaggagtgttactatctg
gatgacctgcgtgttctctgtggcctcactaagaaagagcacatgaaggggaacgaggcc
ctgctggatttccgcaccagccgttttgtgttgcgcatctccagagactcgtaccagctg
ttgaagagacacttgcaggagagacataataaccagatatggaacatcattcaagagcac
ttgtacatcgacatctttgacggcatgccccgcagtaagggtcagatcgacagcatgtcc
ggcagtcttgcgggagaggccaaacgagaagtcaataaagccaaggtgttctacgggctg
ctgaaggagccagagattgaagtcccactagatgatgaagatgaagaagcagagaatgag
gaaggaaagcccaagaagaagaaaactaaaaaggacagtatgggctccaagagtaagaaa
caagaccctaatgcccctcaacagaacaggatccctctgccagagctgaaggactcggac
aaactggataagatcatgtacatgaaggagagcaccaaaagaatccggctgagcccggag
aacctgccttctatttgcttctatacgttcctcaatgcctaccagggtttgacggcggta
gacttcactgacgactccagtctgttagcgggaggatttgcagactccacggttcgcgtg
tggagcgtcacacccaaaaaattacgcaaagtcaaatctgcagcagacctgaatctgatt
gataaagagtctgatgacgttctggagaggattatggatgagaagacagccagtgagtct
aaaatcctacacggtcacagcgggccggtgtatggtgtcagcttcagtccagacaggaac
tatctgttgtctagttctgaggacggcacagtcagactgtggagccttcagacgtttaca
tgtcttgtggggtataaaggacacaactatccagtgtgggacactcagttctcaccgttc
ggctattactttgtgtctggaggtcacgacagagtggcacggctctgggcgacggaccat
taccagccattacggatatttgctgggcatctggctgacgtcacatgcacgcgattccac
cccaactcgaactatgtggccacaggctcgaccgaccgcactatacgcctctgggatgtc
ctgaatggaaactgtgtccgcatttttacaggtcacaaggggcccatccattgtcttgca
ttctcacctaatggaaagttcctggcatctggatccacagacgggagagttttactatgg
gatattggacatgggctgatgatcggagaactgaagggccacacagacacaatttatgcc
ctcaagttcagcagagacggagaaatccttgcatcaggctctatggataacacagttcgg
ctgtgggactccatgaaggctttcgatgaggtggagacggacgacttcacggcagcaacg
ggccacatccacctgcctgataactctcaggagctgctgctggggacgtaccatagcaaa
tccacacccgtcacccacctgcacttcaccagacgcaacctgctactggctgcaggagcc
tacaactcccaatga
DBGET
integrated database retrieval system
