Ctenopharyngodon idella (grass carp): 127508024
Help
Entry
127508024 CDS
T08802
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127508024
09122 Translation
03013 Nucleocytoplasmic transport
127508024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127508024
03041 Spliceosome [BR:
cide03041
]
127508024
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127508024
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127508024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_CDC20-Fz
WDR55
Beta-prop_NOL10_N
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_Gbeta
CFAP251_N
TRM82_WD
WD40_MABP1-WDR62_2nd
WDR54
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
DSE1_N
Beta-prop_IP5PC_F
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
Beta-prop_ACSF4
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
WD40_like
Beta-prop_VPS8
Beta-prop_HPS5
ASA1
Beta-prop_WDR41
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
127508024
NCBI-ProteinID:
XP_051741465
LinkDB
All DBs
Position
3
Genome browser
AA seq
323 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIAVFSLSAALSPDASEGSQKPILNFTAHD
GPVFSLLSTDTHLLSAGNGEISAWSWAELIKKSTKGAWTRKPNYETSLEIPEINAMIINP
KDNSLIVGGGDNNIHIMDMETGVFKSVLKGHTDYIHCLCFKEREGEILSGGEDGAVRIWD
SRTNRPVHCIEVFKYEECARPQFGKWISCLATDSDWMLCGGGPSLSLWHLRSMSPTSVFP
LPGCQREAVFYQDLIMSVGEGPYVSHCLHGGTVKAQIPCSPSSLNTLALNLKNTEHRVMT
VGGSSHQIDVFTNFSYRAFSLSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggtccagttgagctccttcatatgtccgtgttctcgcagagtttctctccctgcggt
cgtttccttgcagcgggtaataactatggagagatcgcagtgttcagtctttcagctgca
ctgagtccagatgcatcagaggggagtcaaaagcccatccttaacttcactgctcatgac
ggtccggtgttctctctgctctccacggacactcatctcctgagcgctgggaatggagaa
atcagtgcctggagttgggcagagctcatcaaaaaaagcaccaaaggcgcatggacaagg
aaacccaattatgagactagtcttgaaattccagagatcaatgcaatgatcattaacccc
aaggacaacagcttgatagttggaggaggtgacaataacattcacatcatggacatggag
acaggtgtttttaagtctgtactgaagggccacactgactacatccactgcctgtgcttt
aaagaaagggaaggggagatactctctggtggagaggatggtgccgtgaggatatgggac
tcacggacaaatcggccggttcactgtattgaagtgttcaaatatgaagaatgcgcacgc
ccccagtttgggaagtggattagctgtcttgctacagactctgattggatgctctgtggt
ggaggcccatcactctctttatggcaccttcgatccatgtcccccacctctgttttccct
ttgcctggatgtcaaagagaagctgtcttttaccaggacctgatcatgtcagtaggtgag
ggtccatatgtgtcccactgtttacatggaggtacagtgaaagctcagattccctgctct
ccttcatcactcaacacactagctctcaatctcaaaaacactgaacacagggttatgaca
gtagggggcagcagtcaccaaattgatgtgttcaccaacttcagttacagagccttttct
ctgtcattctga
DBGET
integrated database retrieval system
