Ctenopharyngodon idella (grass carp): 127508315
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Entry
127508315 CDS
T08802
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03320
PPAR signaling pathway
cide04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
127508315
09158 Development and regeneration
04382 Cornified envelope formation
127508315
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cide01004
]
127508315
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127508315
Lipid biosynthesis proteins [BR:
cide01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127508315
Transporters [BR:
cide02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
127508315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127508315
NCBI-ProteinID:
XP_051742075
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Position
3:complement(40482828..40495509)
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AA seq
647 aa
AA seq
DB search
MHYVASGSLSFSSLGLLRLFGASWSWSLAAGLGVYLGTGGWRYLYVVVRTAKRDLNGLYV
LLRVKLALWHHIRHRNTIPSIFAQTVAQHPDKPALVYEATGETWTFCQLDQISNAVAHWA
LSQGWTSGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRRDSLLHCVGVSASRGMV
FGAELADAVSEVSSSLSETMVRFSTGDLRPDQMAALKCQPLDSILASAPRHPPSTIVSKG
FNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYHSFRMRPDDIIYDCLPLYHSAGNIM
GVGQCLIHGITVVVKKKFSASRFWEDCIKHNCTVVQYIGEICRYLLSQPVRPSERQHRVR
LAVGNGLRPSVWEAFMERFGVKQIGEFYGATECNCSIANMDGKVGACGFNSRILPNVYPI
RLVKVNEETMELVRDKQGLCVPCRPGEPGLLVGRINQQDPLRRFDGYASQDATRKKIAYN
VFRKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRWKGENVSTTEVEGTLSSLLGQTDVAV
FGVNVPGVEGKAGMAAIADTTGSFNCNSFLREVQQALPPYARPIFLRISPCVDTTGTFKI
QKTRLQREGYDPRLTTDQIYFLNSRAGRYELVNEELYNAFEEGRISL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcactatgtggcgagtggttccctgtccttcagttctctgggcctgctccgtctgttt
ggggcatcttggtcctggagccttgcagcaggtctgggtgtttacttaggaacaggaggc
tggcggtacctgtatgtggttgttcgtacggctaaaagggacctcaatggtctttatgtg
ctgctgagggttaaactggcgctatggcatcatatccgtcaccgaaacaccataccctcc
atctttgcacaaaccgtggctcaacacccagacaagcctgcgctcgtgtatgaagccact
ggagaaacatggactttttgccagttagatcagatctccaatgctgtggcccattgggca
ctgagccagggctggacctcaggagatgtggtggcactcttcatggagagccggccgctc
caagtggcgctctggcttggcctggccaaagtaggtgtggaggctgcgctcattaacttc
aacctccgacgggattcgctcctgcactgcgtgggtgtgtcagcatcccgagggatggtg
tttggagcagagctagcagatgccgtgtctgaagtgagctcctccttgagtgagaccatg
gtgcggttcagcacgggagacctcagaccagaccagatggctgctctgaaatgtcagccc
cttgactccattctggcatctgcccctcgacacccaccatctaccattgtgtccaagggc
ttcaatgatcgtttgttctatatctacacttctggcaccacaggactccctaaagctgct
atagtggtgcacagccgatattacagaattgctgctttcgggtaccattctttccgtatg
cggccagacgatatcatctatgactgtttacccctctaccactcagcaggtaatattatg
ggtgtgggccagtgtctgattcacggtataactgtggtggtcaagaagaagttctcagca
agccgcttctgggaagactgtatcaaacataactgcactgttgtgcagtacataggcgag
atttgccgttacttgctgtcccagcctgtgcggccctcggagcgacagcaccgggtgcgt
ttagctgtggggaacgggctgcggccgagcgtgtgggaggctttcatggaacgctttgga
gtgaaacagattggcgagttctatggagccaccgagtgcaactgcagcattgccaatatg
gatggcaaggttggtgcttgtgggtttaacagtcgcattctgcctaatgtgtaccctatc
cgactggtgaaagtgaacgaggaaaccatggaactggttcgagacaagcagggactgtgt
gtgccttgccgacctggagagcctgggctcttggtggggagaattaatcagcaggatcct
ctgcgtcggtttgatgggtatgctagtcaggatgccaccaggaagaagatcgcctacaat
gtattcaggaaaaatgactcagcatatctgtcaggtgatgttttagttatggatgagctt
ggatacatgtacttccgggacaggagtggtgacacgtttcgttggaaaggtgagaacgtc
tccactactgaagtggagggaacactgagcagcctgttgggacagactgatgtagcagtg
tttggagtaaacgtgccaggtgtggagggcaaagctggaatggctgccattgctgacaca
acaggaagctttaactgtaattctttcctgagagaggttcagcaagctcttcctccatac
gcacgaccgatatttctacgcatctccccatgtgtagatactacaggaacatttaaaatt
cagaagaccagattgcagagggaaggatacgatccacggctcacaactgaccagatctac
tttctgaactccagagcaggccgttatgagcttgtgaacgaggagctgtacaatgctttt
gaagaaggaaggatatccctttga
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