Ctenopharyngodon idella (grass carp): 127508316
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Entry
127508316 CDS
T08802
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00310
Lysine degradation
cide00514
Other types of O-glycan biosynthesis
cide01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127508316
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
127508316
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cide01003
]
127508316
Enzymes [BR:
cide01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
127508316
Glycosyltransferases [BR:
cide01003
]
O-Glycan biosynthesis
O-linked Gal type
127508316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
127508316
NCBI-ProteinID:
XP_051742076
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Position
3:complement(40418603..40431365)
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AA seq
609 aa
AA seq
DB search
MLWFVLFVSVLLSCLMNTGPAQGYFHEERWSPESPILAPRVMITLICRNAQHSLPHFLGT
IDRLNYPKDRIALWVATDHNIDNTTYLLRDWLINVQKLYHYVEWRPKEEPREYHNEEGPK
EWTNERYAYVMRLRQAALESAREMWADYLMMIDCDNLLINRDVLWKLIKENKTIVAPMME
SRAAYSNFWCGMSSQGYYKRTPAYIPMRKQVRRGCFTVPMVHSTFLVDLRKEASRLLAFH
PPHPDYTWAFDDIIVFAFSARMAEVQMFVCNKETYGYLPVPLRAHSTLQDEADSFIHTVI
EVNVRNPPVEPSRYLPKPVKKPDKMGFDEVFMINLKRRDDRRERMLRALREQEIDCKIFA
AVDGKAMNVSEIQSMGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIEDRGLKTSLV
LEDDLRFEIFFKRRLQNLMHEVESKGLDWDLIYIGRKRMQVDRPEKAVPNIRNLVEADYS
YWTLGYMMSLQGAKKLLKAEPLSKMLPVDEFLPVMFNKHPVSEYMEQFETRDLKAFSAEP
LLVFPTHYTGEPGYISDTETSTVWDNEKVRTDWDRKRSGKTREQAEISTEAQNSDVLQSP
LDRTARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctctggttcgtgttgttcgtgtctgtgctgttgtcctgtctgatgaatactggacca
gctcaaggatatttccatgaagagcggtggagcccggagtctcctatattagctcctcga
gtaatgatcactctcatctgccgtaacgcccagcactctctgccgcatttcctcggaact
attgatcgcctcaattaccccaaagatcgaatcgcgctctgggtagcaaccgaccacaat
attgacaacacaacatacctactgcgagactggctcatcaatgtacagaaactctaccat
tatgtggagtggaggccaaaggaggaaccaagagaatatcataatgaggaaggaccaaag
gagtggacgaatgagcgctacgcttatgtcatgagactgcggcaggcagcgctcgagtct
gcacgagagatgtgggcagactatctcatgatgattgattgtgataatcttctgatcaac
cgagatgttttatggaaactaataaaggagaacaagacaatcgtggcaccgatgatggag
tctcgtgctgcctactcaaacttctggtgtggaatgtcatcccagggctactataaacga
actcctgcctacatccccatgcgtaagcaagtgcgtaggggttgctttaccgttcccatg
gtgcactcgactttcctggtggacctgcggaaagaagcttccagacttctggcttttcac
ccgccgcatccagactacacctgggcctttgacgacattatagtcttcgctttttcagcc
cgcatggcagaggttcaaatgtttgtttgtaacaaggaaacttacgggtatctcccagtg
cctcttcgtgcccacagcactttgcaagacgaggcagacagcttcattcatactgtgatt
gaggtcaatgtgcgaaaccctccagttgagccctccagatacttgcccaaacctgtcaaa
aaacctgacaaaatgggctttgatgaggtgtttatgatcaacctgaagcggcgggatgac
cgtcgtgagcgcatgctgagggctttgagagagcaagagatcgactgcaagattttcgct
gctgtggatggcaaagctatgaacgtgagtgagatccaatctatgggaatccacatgctt
cccggctacagtgacccgtaccacggcagacctcttacaaaaggagagctgggctgtttc
ctgtcccactacaacatctggaaagagattgaagacagaggcctgaagacatcgctagtg
cttgaagatgatttgcggtttgagattttcttcaagcgacgcctgcagaatttaatgcat
gaggtcgagagtaagggtctggattgggacctcatttatattgggaggaagaggatgcaa
gtggaccggcctgaaaaagcagtaccaaacattcgcaacctggtggaggcggactattcc
tactggaccttgggttacatgatgtcattgcaaggagccaaaaagctcctcaaagcagaa
ccactcagtaaaatgttgcctgtggacgaattccttccagtaatgtttaataagcatcct
gtatcggaatacatggagcagtttgagacgagggacctgaaagcattctcagcggagccc
ttgcttgtgttccctacacactacacgggcgaacctgggtacatcagtgacaccgaaacc
tccacggtgtgggacaatgagaaagtgcgcacagactgggacaggaagcgctcgggtaag
acccgggaacaggctgagatcagcacagaggcccaaaactcagatgtgctccagtctcct
ctggataggacggccagagacgaactatga
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