Ctenopharyngodon idella (grass carp): 127508337
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Entry
127508337 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127508337
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127508337
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
127508337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
NBCH_WD40
WD40_like
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
Beta-prop_IFT140_2nd
zf-C3HC4_4
Sina_ZnF
Beta-prop_EIPR1
Beta-prop_Nup120_160
zf-C3HC4_3
zf-TRAF
WD40_MABP1-WDR62_1st
zf-RING_5
DUF1664
EzrA
DUF16
Filament
WDR90_beta-prop_4th
DUF4164
DUF641
U-box
KxDL
Motif
Other DBs
NCBI-GeneID:
127508337
NCBI-ProteinID:
XP_051742120
LinkDB
All DBs
Position
3:complement(33131242..33149841)
Genome browser
AA seq
673 aa
AA seq
DB search
MSCCKPSRFDRFSGGSVAGATITVPSPDISNRTKMEASFGSTFPAVPQVAKAETNYKQHR
RTPSTSSTLTYSPRDDDDGMPPISTPRRSDSAISIRSLHSESNMSLRSTFSLHEEEEDTE
PQVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNSKLTVVVNNIAV
AEQIGELFIHCKYGCRPAASGKPGAFEVDPLGCPFTIKLSTRKEHEVSCDYRPVRCPNNP
NCPPLLTMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLEVCKFEGLKEFLQQTDDR
FHEMQVTLAQKDQDISFLRSMLGKLSEKLDQLEKNLELKFDVLDENQSKLSEDLMEFRRD
ASMLNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSTGDLLFSGSSD
KSIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQTLQKVNTIRA
HDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNHLYSGS
YQTIKIWDIRSLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG
HVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLF
SGAVDSTVKVWTC
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagctgttgtaaaccatcacgtttcgatcgattctcaggaggatctgtggcaggtgcc
actatcactgtaccctcacctgacatcagcaaccggaccaaaatggaagctagtttcgga
tccacgtttcctgcagtccctcaagtagcaaaagcggaaaccaattacaaacagcatcgt
agaaccccttcaacctccagcactctgacctactcgcctcgtgacgacgatgatggcatg
ccgcccatcagtacccctcgtcgctcagactctgccatctcgattcgctccctgcactcc
gagtccaacatgtcgttgcgctccaccttttccctacacgaggaagaggaagacacagag
ccgcaggtgtttgcagagcagccctcagttaagctctgttgccagctgtgctgcagcgtg
ttcaaggaccccgtcatcaccacctgcggacacacattctgcaggcgatgtgccttgacc
tcagagaaatgccctgtggacaattccaagctcacagtggtagtgaataacatagcggtg
gctgagcaaatcggtgagcttttcatccactgcaagtacggctgccggccagctgcttca
ggcaagcccggtgcctttgaggttgacccacttggctgtcctttcaccatcaagctcagc
accaggaaagaacatgaagtgagctgcgactacagacctgttcgctgtcccaacaacccc
aactgccctccactgctcaccatgaacctggaggcccatctgaaagagtgtgaacacatc
aagtgccctcattctaaatatggttgcacctttattgggaatcaggatacatatgagacg
cacctggaggtgtgtaagttcgaggggctgaaggagtttctccagcagacggatgacaga
ttccatgagatgcaggtgacactggcacagaaggaccaggacatctcattcctgcgctcc
atgctgggcaaactctctgagaaactagaccagctggagaagaacttggagctcaagttc
gatgtgctggatgagaatcagagcaagctcagtgaagatctgatggagttccgacgagat
gcttccatgctgaatgatgaactgtcccacatcaatgccaggctcaatatgggtatactg
ggctcctacgaccctcagcagatcttcaaatgcaagggtacctttgtgggccaccagggt
ccggtatggtgtttgtgtgtgtattctaccggtgatcttctctttagtgggtcatcagat
aagtccatcaaggtttgggacacatgcaccacatacaagtgccagaagaccctagagggc
catgacggcatagtgttggcattgtgcattcaggggaacaagctctacagtggctcagct
gattgcacgatcattgtttgggatatccagaccctgcagaaagtgaacactattcgggca
catgacaaccctgtgtgcactctggtgtcctctcacaacatgctcttcagcggctctctc
aaagccattaaggtgtgggatattgtgggcacagagctgaagctaaagaaggaactgact
ggcttgaatcactgggttcgagctctggttgcttctcagaatcatctgtacagtggatct
tatcaaaccataaagatctgggacatccgttctctggagtgcgtgcatgtgctccagact
tctggaggcagtgtgtactccattgcagtcaccaaccaccatatagtttgtggcacctat
gagaacctcattcatgtttgggacattgagtccaaagaacaggtgcggactctgacaggc
cacgtgggcacagtgtatgccctggccgttatttccacccccgatcagaccaaagtgttc
agtgcctcctatgatcgctctctcagggtgtggagcatggacaacatgatctgcacccaa
actctgctgcggcaccagggcagcgtgacggcactcgctgtatccagaggaagactgttc
tctggagctgtagacagcacagtaaaggtgtggacatgctaa
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