Ctenopharyngodon idella (grass carp): 127508342
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Entry
127508342 CDS
T08802
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127508342
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127508342
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
127508342
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RecQ5
EloA-BP1
TFIIS_M
ResIII
KIX_2
Motif
Other DBs
NCBI-GeneID:
127508342
NCBI-ProteinID:
XP_051742135
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All DBs
Position
3:43479525..43508047
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AA seq
967 aa
AA seq
DB search
MSAVHRALKNHFGFDKFRSQQQEDAVKAVLKGDRDVFVCMPTGAGKSLCYQLPALLASGI
TLVISPLIALIQDQVEHLKALNVPARSINSKLPLAERRQILADLESESPRLKLLYITPEM
VASPSFQPCLSSLCSRGLLAYLAVDEAHCVSQWGHDFRPDYLKLGDLRSRLQGVPCVALT
ATAPKRVQEDIERSLKLRSPLVFATPVFRKNLKYDVIFRDLLPDPYVHLLAFAKEALGGN
TAEKGCGIVYCRTRESCEEVAHKLTKLGISAKPYHAGLKVGDRTESQADWMADKVPVIVA
TISFGMGVDKANVRFVVHWNLAKSLASYYQESGRAGRDGLPSSCRIYYSPKDRDQLNFLI
RKEITRKQEKRGSEKEQDKAPILDFEAMVAFCEQEGCRHATISQFFGNQKPNCAGACDYC
RDPKLVRAQLARAAALSTRTGPAQSAEPRGPFGFDPELYAGGRKGYGFERYDEEWGSEED
DSEKRKKEFGSLFKKQMNLRKGSDMAKETFVPPDDDCVLKDAASQRIPRLTVKSREHCLS
LLQECLTSHRGAAELSHSGEALDQAVEIEHEIFKASKSANLYKAAVLKRVSEMKKSASVH
EEKQCESTEASATCSSSSQPEHLGGFTSASQVYSLKRKRVGAGFRGSSSLFQTAGDLLNS
KKETLTTDKTPGDPACEEEEEETGKTQMKSSKTTPAGTSLIKANTNSTSSLSSPSKKLTK
KQQKLAESAKDMRCISQYFGKKQVDATQVKGGSVISEPEEESSRHHSPSPNLTDFTTMNS
TSMDVESISENDATAYASPPAEEMPSRDETAMELTAHPELQRENLKSDGQQKSPKQSHED
RAASPPAKRSRVIKDSKRVTFDPVVQETKFETMNGNADEISQKLVTLKEAADIVVRCLDP
FYKKGKFATKDLFKSFARFLSHLLTEGKTVKRGQVKMEAKSLIKGFFSKIQRCESEADWK
HLKVEGR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgttcatcgggcgctaaagaatcactttggattcgacaagtttcgctctcag
cagcaggaagatgccgtgaaagcagtgctgaagggtgacagggatgtgtttgtatgtatg
cccaccggagcaggcaagtctctgtgttatcagctcccagctcttctggccagcggcatc
actctggtcatttctcctctcatcgcgctcatccaggatcaagtggagcacctgaaagct
ctcaatgttcccgcacgctccatcaactccaaacttccgttggctgagcggcggcagatc
ctggcggatctggagagcgagagtcctcggctcaagctgctctacatcactccagagatg
gtggcatcgccgtccttccagccctgcttgagctcactgtgctcacggggtctgctggcg
tatctggcggtggatgaagctcactgcgtctcccagtggggtcacgacttcagaccggac
tatctgaagctgggggacctgcgctcccgtttgcagggagttccttgcgtagcgctcaca
gccacagcgcccaagagagtgcaggaagacatcgagcgctcgctcaaactgcgctcgcca
ctcgtctttgccacacctgttttccgtaaaaacttgaagtatgatgtgatcttccgtgat
ctgctgcctgacccttacgtccacttgcttgcgtttgctaaagaggctctgggcggaaat
actgctgaaaagggatgtgggattgtttactgtcgaacccgagaaagttgtgaggaagtg
gctcataagttgactaaactgggaatttcagccaagccctaccatgcagggctgaaggtg
ggcgatcgcacggagagtcaggctgactggatggctgataaagtgcctgttattgtggcc
accatcagttttggtatgggagtggacaaggccaatgtcaggtttgtcgttcactggaat
ctggcgaaatctttggccagttactatcaggagtcaggacgagctggacgtgacggactg
ccgtcgtcctgcagaatatactactcacccaaagatagagaccagctcaacttcctcatc
cgcaaagaaatcacacgcaaacaggagaagcgaggatcagagaaagagcaggacaaggcg
cccattctggacttcgaggccatggttgctttttgtgagcaagaagggtgcagacatgcc
accatctcacagttttttggcaatcagaagcccaactgcgccggggcgtgtgactactgc
cgtgaccccaaactggtccgcgctcagctggcgagagcagccgccctcagcaccagaact
ggcccggcccagagtgcagagcccaggggaccgttcggcttcgatcctgaactctacgcc
ggaggcaggaagggttatgggtttgagagatatgatgaggaatggggcagtgaggaagat
gactctgagaagagaaagaaagagttcggaagtctgttcaagaagcagatgaacctgaga
aagggttcagatatggcaaaagaaacgtttgttccaccagatgatgactgcgtgttgaag
gatgctgccagtcagaggatccccagactcacagtgaagagcagagagcactgcctgtct
ctgctgcaggagtgtctgaccagccacaggggggcagcagagctttcacacagcggcgag
gctcttgatcaggctgtagaaatagagcacgagatcttcaaggccagtaaatctgcaaac
ctgtacaaggctgcggtcctcaagagagtgtcagagatgaagaaaagtgcaagtgttcat
gaggagaaacagtgtgaatctactgaagcgtcggcgacctgctcttcatcatctcaacct
gaacatctgggcggcttcacttcagcctctcaagtctactcactgaagaggaagcgtgta
ggcgctggatttcgtggatcgtccagcctgtttcagacagctggagatcttctgaactct
aagaaggagactctcaccacggacaaaacacccggagaccctgcctgtgaggaagaggag
gaggaaacaggaaaaacccagatgaaaagcagtaaaacaactcccgccggcacgtccctc
atcaaagccaataccaactccacttcctccctgagcagcccaagtaaaaaactcactaag
aagcagcagaaactagcagaatcagccaaagacatgcgctgtatatcgcagtatttcgga
aaaaagcaagtagacgccactcaggtgaaaggaggaagtgttatatcagagcctgaggag
gaaagctctcgccatcactcgccttcaccaaatctgactgactttacaacgatgaatagc
acctccatggatgtagaaagcatttcagagaatgacgctactgcgtatgcgagtccccct
gcagaagagatgcccagccgagatgagacggccatggagctcacagcacatccagagctt
cagcgagagaatctgaagtctgacggccaacaaaaatcaccaaaacaatcacatgaggac
agagcggcatctcctcctgcaaaacgcagccgtgtgataaaggacagcaagagagtgacc
tttgaccctgtggtgcaggagacaaagtttgagacaatgaatggaaatgcagatgagatt
tcacaaaagcttgtgacacttaaggaggccgctgatatcgtggtccgatgtctggatcca
ttctacaaaaagggcaaatttgcaacaaaggatttgttcaaatcctttgcccgtttcctc
tctcatcttctcactgagggaaaaactgtaaaacgaggccaagtgaagatggaagcaaag
agcctcatcaagggcttcttcagcaagattcagcgctgtgagagcgaggcagactggaaa
cacttgaaagtcgagggcagatag
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