Ctenopharyngodon idella (grass carp): 127508386
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Entry
127508386 CDS
T08802
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127508386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127508386
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127508386
04147 Exosome [BR:
cide04147
]
127508386
Membrane trafficking [BR:
cide04131
]
Endocytosis
Phagocytosis
Coronins
127508386
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127508386
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127508386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_RFWD3
Trimer_CC
WDR90_beta-prop_4th
WDCP
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_HPS5
MIOS_WD40
BLOC1_2
ADIP
bZIP_2
CorA
Beta-prop_Nup120_160
TolA_bind_tri
DivIC
bZIP_1
DUF1664
Motif
Other DBs
NCBI-GeneID:
127508386
NCBI-ProteinID:
XP_051742210
LinkDB
All DBs
Position
3:complement(28755203..28763698)
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AA seq
455 aa
AA seq
DB search
MSRKVVRTSKFRHVFGQAVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFI
VLPLSKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPDGGLISPL
KDPVVKLDGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVARGEAVVRIDSVHTDLIYS
ACWNRNGSQILTACKDKKLRVFDPRKGSVISEKDKAHEGSRPIRAVFVSEGKILTTGFSR
MSERQVALWDPNNFGEPLTLQELDTSSGVLLPFFDPDTGVVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTIGPEPSVEADDWFAGKDGEPILISLKDGFVATTKNKEFKVIKSLMATTSSSSNS
RQSDNGDVQALQNEVKELREIVEQLTKRVSQLESK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggaaggtggtcaggaccagtaaattccgtcacgtctttggccaggcggtgaag
gcagaccagtgctatgatgacatcaggatctcccagatgacctgggacagcaacttctgc
tccgtcaaccccaagtttgtggccatgattgtggatgccagtggtggaggagcttttatt
gtcttgcccctgagcaagacgggtcgcatcgacatgtcccaacccactgtctgcggtcac
acgggacccgtattggacattgaattctgcccacataatgacaacatcattgccagtggc
tctgaagactgtagtgtcatgatctgggagattccagatggaggtctcatatcgcccctg
aaggaccccgttgtgaagctggacgggcactctaaacgtgtgggcatactcagctggcac
cccactgcccacaatgtgctaatgagtgcaggctgcgataacgtggtcatcctgtggaat
gtggctcgtggagaggcagtggtgcgcattgactcagtgcacactgatctgatctacagc
gcctgctggaacagaaacggctctcagatccttactgcctgcaaggacaagaaactacga
gtgttcgacccccgcaagggctccgtcatctctgagaaggacaaggctcatgaaggttcc
aggccaatcagagctgtgtttgtgtctgaaggcaagatcctgaccactggtttcagccgc
atgagtgagaggcaggtggcactgtgggatcctaacaactttggtgagcccttgaccctg
caggagctggacaccagcagtggagtgctcttacctttctttgaccctgacactggtgta
gtctacctttgtggcaagggtgacagcagcatcaggtactttgaggtgacagacgaggct
ccatacgtccactatctctccatgtacagcagtaaagagagtcagaagggcatgggctac
atgcctaagagaggtctggaagtcaacaagtgtgagattgcaaggttctataaacttcac
gagagaaagtgtgaacctattgtcatgactgtgcctcgcaagtctgacttgtttcaagag
gacctttaccctgacacgattggtccagagccatcggtggaggcagatgattggtttgct
ggtaaagatggggaaccaattctgatctccttgaaggacggttttgtggctaccaccaaa
aacaaagagttcaaagtcatcaagagcttgatggccacaacatcctcttcctcgaacagc
cgacaatctgacaatggggacgtgcaggccttgcagaatgaggtgaaggagctgagagag
atagttgagcagttgaccaagcgagtgagccaactggagagcaagtag
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