Ctenopharyngodon idella (grass carp): 127508500
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Entry
127508500 CDS
T08802
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
cide03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127508500
03015 mRNA surveillance pathway
127508500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127508500
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127508500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_5
KdpD
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
127508500
NCBI-ProteinID:
XP_051742494
LinkDB
All DBs
Position
3:3153140..3159581
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AA seq
285 aa
AA seq
DB search
MAPSPTKRRERSEDKPRERGKEKAAGKEGAEKERGRDKIRKRRSNSTGSSSSRSRSSSSS
SSSSGSSSGSSSGSSSSSGSSRSGSSSSSRSSSSSGSSGSPSPSRRRHDNRRRSRSKSKS
QKRTDEKERKRRSPSPKPTKLYLGRLTRNVTKEHIQEIFSTYGKIKMIDMPPDRLHPNLS
KGYAYVEYESPEDAQKALKHMDGGQIDGQEITATAVLPQRIRPAMRRPSPPRRMPPPPPM
WRRTPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatcaccaaccaagcgcagggagcgttcagaggacaaacccagggaacgaggg
aaggagaaggctgctggaaaagagggagcggagaaggagagaggcagagacaagatacgc
aagcgccgcagtaactccactgggagcagcagcagcagatccaggtccagttctagctcc
agcagcagctctggatccagttcgggctcgtccagtgggtccagctcttcttctggttcc
agccgctccggttcgtccagttcctctcgttcctctagttcatccgggtcctctgggtct
ccgagtccaagccgccgtcgccatgacaatcggcgccgctcacgatcaaagtccaaatca
caaaaacggacagatgagaaagaaaggaagaggaggagcccgagccccaaacccaccaaa
ctttatctgggaagactcaccaggaacgtaaccaaggaacatattcaagagatcttttca
acttatggcaagataaagatgatcgacatgcctccagaccgtttgcaccctaatttgtca
aagggttacgcatatgtggaatatgagtctccagaggacgcccagaaagccctgaaacac
atggacggaggtcagattgacggtcaggaaatcacagccacggctgtcctgcctcagagg
atacgacctgccatgagaagaccatcacctccacgcaggatgcctcctccgcctcccatg
tggcgccgcacaccgcctcgcatgaggagaaggtctcggtctccacggcgacgctccccg
gtgagaaggcgctctcgctccaggtctccgggtcgcagacgacatcgttcccgctccagt
tccaactcgtcccgttag
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