KEGG   Ctenopharyngodon idella (grass carp): 127508538
Entry
127508538         CDS       T08802                                 
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
  KO
K17908  autophagy-related protein 18
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04136  Autophagy - other
cide04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cide00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    127508538
   04136 Autophagy - other
    127508538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cide04131]
    127508538
   03029 Mitochondrial biogenesis [BR:cide03029]
    127508538
Membrane trafficking [BR:cide04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    127508538
Mitochondrial biogenesis [BR:cide03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    127508538
SSDB
Motif
Pfam: PROPPIN WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RSE1_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 DUF7165 BCAS3_WD40 Dimeth_Pyl
Other DBs
NCBI-GeneID: 127508538
NCBI-ProteinID: XP_051742554
LinkDB
Position
3:complement(35756339..35766973)
AA seq 427 aa
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFCIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQREKSVPQEEPTTWTGYFGKVLMASTTYLPAHVTEMFTQ
GRAFATVRLPFSGHKNICALAIIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHKLD
GSAEPANEILEQTAHDRPLVAQTYSAAVAKGYTEDQGAVGGAGLEDDMNTLHLDEENEQP
PLILETD
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgaacctggccagtcagagcggagaggccggctgcagccagctgctcttcgccaacttt
aatcaggataacacatccctagctgttggtaccaagtctgggtacaagtttttctccttg
tcatcagtagacaaattggaacagatctatgaatgtactgacacagaagatgtgtgcatc
gtggagagattgttctccagcagccttgtcgctattgtcagccttaaggcacctaggaag
ctgaaggtctgtcacttcaagaaagggacggagatatgcaactacagctactccaacact
atactggctgtaaaactaaacaggcagagattgatagtgtgtttagaggagtcactctat
atccacaacattagggatatgaaagtactacataccattcgagagacccctccgaatcct
tccggactgtgtgccctgtcaatcagtaatgacaactgctacttggcctatccgggaagt
gcaacaattggggaagtacaagtttttgatacggtcaacctgagggcagctaacatgata
cctgcccatgatagcccactagcagcactggcgtttgatgcaagcggcactaaattggcc
acagcctctgaaaagggcaccgtgatccgtgtgttctgcattccagagggccaaaagctc
tttgagttcagaaggggagtaaagagatgtgtgagcatctgttcccttgccttcagtatg
gagggactctatctgtctgcctcaagcaacacagagacggttcatatttttaagctggag
acccagagagagaagtcagtgcctcaggaggagcccactacttggacaggatactttggg
aaagtattgatggcctccacaacatatctgcctgcacacgtaacagagatgttcactcaa
ggaagggcatttgctacagtcagactgcccttttcaggtcacaagaacatctgcgctctg
gccataatccagaagattccacgcctgctggtggctgcagctgatggctatctttacctg
tacaatctggacccacaggagggaggagagtgcacactaatgaaacagcataagttagat
ggaagtgcagagccagcgaatgaaattcttgaacagacagctcacgaccggccacttgtg
gcacagacctacagtgctgctgttgccaaaggttacactgaggatcagggggcagtaggg
ggtgctggtttggaggacgacatgaacaccctgcacctggacgaagagaacgagcagcct
ccgttaatcctggaaacagactga

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