Ctenopharyngodon idella (grass carp): 127508583
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Entry
127508583 CDS
T08802
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127508583
04020 Calcium signaling pathway
127508583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127508583
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127508583
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
127508583
NCBI-ProteinID:
XP_051742628
LinkDB
All DBs
Position
3:35153842..35258407
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AA seq
2322 aa
AA seq
DB search
MTDGEGREHFHYLERGEVRVPISALYRAPGPSEEIGDEEEKSSTWIPVHESSQAQGSGAR
DPTPDLVSDEEEQPPYPMLAPVVFFCIKQTTRPRSWCLRMVCNPWFEHVSMLVILLNCVT
LGMFQPCEDLKCQSEWCIVLQAFDDCIFAFFAVEMVIKMIALGIFGSKCYLGDTWNRLDF
FIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLL
CFFVFFIFGIVGVQLWAGLLRNRCFMPDDVKALYNLSFMSPYYMNEDGEDNPFICSSIKE
NGMLRCSEVPPLKDGVECTLNASPPGHAYSGLDGTSNSSCVNWNQYYNVCKAGELNPHKG
AVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVV
IATQFSETKQRENQLMQEQRACYLSNDSTLASYSEPGSCYEEMLRYISHLYRKVKRRASR
IYNGWQSKRRKKVNPNSVLSGGGGGGSGANGHSRHRGGGHWVRSIHNLIQQHQRQHCHLS
NGSPSPVASTGPGEALEMRSITTGPQLTVCSQPTGMHNLSSRTQSVHSIYQGDFHEAPQG
RMSATVAVPPLGRLNGGMNYPTILPSLICSYTGSSSAGKGRRESDINTGCEAIDPFEKLH
QLMGEHSHSRVLLQIAGVVPSQLLLELLSCPYCTRALENLDLELGDSDYSRSEGDVVYEF
SHGAEFKPSRAPHHKILEERNRLAQYWEDFRDRLTRIVDSKYFNRGIMIAILINTLSMGI
EYHEQPAQLTNILEISNIVFTSMFVLEMLFKLLAFGTFGYIKNPYNIFDGIIVVISVWEI
IGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSIL
GMHLFGCKFSLKTENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAA
LYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDADEEKRSLNFEEEEKMGELRDTEL
KMYSLMMSANGHVDPRGTLPPPIIMRTAATPMPTPKSSLGPESVFGLTESRRGSGISIDP
NAFDQKSLTSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRKDTSGERESLLSGDGRG
SFEDEDLESEKLANISGGSLQHPSSLDIPELPQTPSFSSLGEYHDCNGRSLHIPTDLSTT
LSKEDSFAEEDMDDSFCLRLKRTLEAYKPKWCKDHEDWSLYLFSPQNKFRMMCQRLISHK
MFDHVVLVFIFLNCITIALERPTIQPSERMFLSISNYVFTVIFVAEMTVKVVALGFCAGK
HSYLQSTWNVLDGVLVFVSLIDILVSLASTGGNRILGILRVLRLLRTLRPLRVISRAPGL
KLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGGDTKNITNKEECLHL
HYKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFI
SFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARMREEKRQKLLEKKRRSKENCGSEAQ
QRPYYADYSPARLYIHTLCTNHYLDLFITGIICINVVTMSIEHFNQPLYLEEALKYCNYV
FTVIFIIEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIKMNAALPINPTIIR
IMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLE
CTDDNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRDCNPEEDKNCLQYLPL
VSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEMKMARRLSNVS
AGSSSEPEGRATYVGPRPDSPRQDEGMQRTQENLLSPRKMSVSRMHSLPNDSYMFRPVRP
ASAPYPLEEVETSQGYLELGSITSVHSQPCESRSLLQVPGVPPHSQFNYLPKIPPPIPSP
THSIGRTLRRQEAIKNDSIDVQSFDSKDNLERHAGITTGFKLHVPRIGGPSIPQASPLLP
PRGQSPSVRTFQQPLSQHNIHSRPPSLASSSRSTSPSGSMFDSADPTDEEVRHINSTARL
WAGVQAEARSHSLSPYATSGTLLPMLVKNCSSAANLGELSIKDPKKCFSVDTEGFLEKPH
GTDDHRRHSIEICSSVDDGLFGQELSEKRHVPMRGQSLHIPRKKKMSPPCISIEPPFEME
APASLASMKKLSESSMLLRRRTPSYDLALQRDSLDLPENQLSTQPLIKVERHPSHCAEYL
SLPHPAPMGSLAGILCESTQPTPFDSRFEESTDFSSINRTAQ
NT seq
6969 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagaacactttcattacttggagagaggagaggtaagagtt
cccatttcagccctgtaccgggcgcccggtcccagtgaagagatcggcgatgaggaggaa
aagagcagcacatggatcccggtccatgagagctctcaggcacaggggtctggggcccgg
gaccccactccggatttggtctccgatgaggaggagcagcccccctacccgatgcttgca
cctgtggtgttcttctgcatcaaacagaccactcgtccacgtagctggtgtctcaggatg
gtttgcaacccatggtttgagcatgtgagcatgctggtgattctcttgaactgtgtgact
ctgggcatgttccagccatgtgaggacctcaagtgccagtctgagtggtgtatcgtctta
caggcatttgatgactgtatcttcgccttctttgctgtggagatggtcattaaaatgata
gccctggggatttttggatcaaagtgttaccttggtgacacatggaaccgcctggacttc
ttcattgtcatggcagggatgatggagtattcactggacggtcataacgccagcctgtca
gccatccggactgtgcgagtgctcaggcccctgcgagccatcaacagagtgcctagtatg
aggatactggtgactctgcttcttgatactctgcctatgttaggcaacgtcctcctgctg
tgcttttttgtcttctttatattcggcattgtcggggtgcagctgtgggctggactcctt
aggaatcggtgtttcatgccagatgatgtgaaagccctttataatctgtcgttcatgagt
ccgtactacatgaatgaagacggtgaggataaccccttcatctgctcctccattaaggag
aatggcatgctgcgctgcagtgaggtgccccccctcaaggatggtgttgagtgcacttta
aatgcatctccaccgggacatgcctactctggcctggatgggaccagcaacagcagctgt
gttaactggaaccagtattacaatgtgtgtaaggccggggagctcaacccgcacaaaggg
gcagtgaactttgataatattggatatgcctggattgcgatattccaggttattactttg
gaaggatgggtggacatcatgtattacgttatggatgctcactccttttacaattttata
tattttatattgcttattatagtgggttccttcttcatgatcaacctgtgcctggttgta
atagcaacccagttctcagaaacaaaacagcgtgagaaccagctgatgcaggaacagcga
gcatgttacctctccaacgacagcacccttgccagctactctgagccggggagctgctac
gaggagatgctgaggtacatcagccacctgtaccgcaaggtgaagcgccgagcttctcgt
atctacaacggctggcagagcaagcgcagaaagaaggtgaaccccaacagcgtgctgagt
gggggaggaggtggcggcagcggagccaacggtcacagcaggcacaggggtggcggacac
tgggtccgttccatccacaacctcatccaacagcaccaacgacagcactgtcacctcagc
aatggcagccccagtcctgtggcctccacggggcccggcgaggctctggaaatgaggtct
atcacaacggggccgcaattgaccgtgtgctctcagccaactggcatgcacaatctttct
tccaggactcagtcagtgcacagcatttatcaaggtgactttcacgaggccccgcaagga
cgaatgagcgccacggtggccgttccgccgcttggacgactaaacggggggatgaactat
ccaaccatcttgccctccctaatctgcagctatacaggcagcagttctgcagggaaaggg
aggagggaatcggatataaatacaggatgtgaagcgattgatccctttgagaagctgcac
cagctcatgggagaacatagccacagtcgtgtgctgttgcagatagctggtgtggtgccc
agtcagttgcttcttgagctcctgagttgcccctattgcacaagggccctggagaacttg
gatctggagctcggagattcagactactccagatcagaaggggacgtggtgtacgagttc
tcccatggagcagagttcaaacccagccgtgcaccccatcataaaatactggaggagcgt
aaccgcctggctcagtactgggaggacttccgggaccgattgacacgcatagtggatagc
aaatactttaatcgaggaattatgattgccatccttatcaacaccttgagtatggggatt
gaatatcatgagcagcctgcgcagctgacaaatattctggagatcagcaacatcgtcttc
actagcatgtttgtcctggaaatgcttttcaaactgctggcctttggtaccttcggctat
atcaagaacccctacaatatctttgatgggattattgtagtcataagtgtgtgggagatc
atagggcaggcggatgggggtctttcagtgctgaggacatttcgtctcctgcgtgtactc
aaactggtgcgcttcctccctgcactgcgcagacagctggtggtgctgatgaagaccatg
gacaatgtggcaaccttctgcatgctgctcatgcttttcatcttcacattcagcattctt
ggaatgcatctgtttggatgcaaattcagcctgaagacggagaatggagacacaattcct
gacaggaaaaactttgattccctgctgtgggccattgtcactgtgtttcagattctgacc
caggaagactggaacgtggtcctctataatggaatggcctccacctccccatgggcggct
ctttactttgtggctctgatgacttttgggaattatgtcctctttaacctgcttgtggcc
atcttagtggaggggtttcaggcagagggagatgctaacagatcagatgcggatgaagag
aagcgatcgctgaactttgaagaggaggagaagatgggggaattacgagatacagagttg
aagatgtattctttgatgatgtcggcgaatgggcatgtggatcctcgtggcactttgcct
cctccaatcatcatgcgcactgctgccacacctatgcccactccaaagagctctcttggc
ccagagtcagtatttggtttgaccgagtccaggcggggcagtgggatctcgatagatcca
aatgcttttgatcagaaatccctgactagcccaagaagatctccgtgccacccccgtggc
tcaggcagcaactggggcagccgtagatccagctggaacagtttaggacgtgcgccgagt
ttgaaaaggaaggacacgtctggggagagggagtctctgctgtctggggatggcaggggt
agttttgaggatgaggacctggagagtgagaaattggccaatatcagtgggggctcactg
cagcatccaagctctctcgatatccctgagctgccccagacccccagcttcagctctttg
ggggaataccacgactgcaatggaagaagcctgcacatacccactgacctgtccaccacc
ctgagcaaagaagattccttcgcagaggaggacatggatgacagtttctgtctccgtctc
aagaggacattggaagcatataaacctaagtggtgtaaagatcatgaggactggtctctt
tatctgttctcgcctcagaacaagtttcggatgatgtgtcaaaggttaatttctcacaaa
atgtttgatcatgtagtcttggtattcatcttcttaaactgcatcactattgctctggaa
agacccactatacagccatccgagcgaatgtttctcagtatctccaattatgttttcact
gtgatctttgttgctgaaatgactgtgaaggtggtggcccttggcttctgcgccgggaag
cacagttatctgcagagcacctggaatgttctggatggggtgctggtctttgtctctctc
attgacattctggtctctctggcttccactggtggaaaccgaatcttgggcatcctgagg
gttcttcgcctgctgagaactctgcggccactgagagtgattagtcgtgctcctggactg
aagctggtggtggaaacgctaataacgtccctgaggcccattgggaacattgtgctgatc
tgttgtgccttctttattgtctttggcattcttggagttcagctcttcaaaggaaagttt
taccattgtgaaggtggcgacaccaaaaacatcaccaataaggaggaatgtcttcattta
cattacaaatggattcggagaaagtacaacttcgacaacttgggacaggctctcatgtct
ctgttcgtgctttcctgtaaggacggatgggtcaatataatgtatgatgggttggacgct
gttggggtggaccagcagcctgtgcgcaatcacaacccctggatgctcctctacttcatc
tctttcctgctgatcgtcagcttttttgtgctgaacatgtttgtgggagtggtggtggag
aacttccacaagtgtcgtcaggaccaggaggaagaggaggcgcgtatgcgtgaggagaag
aggcagaaactgctggagaaaaagcgcaggagtaaggagaattgcgggtctgaggcccag
cagagaccgtactatgcagattactctcccgcccggctctacatccacacactgtgtacc
aaccattacttggacctcttcatcaccggcatcatctgcatcaatgtggtcactatgtct
atcgagcatttcaatcagccactgtaccttgaagaggcattgaaatactgtaactatgtc
tttaccgtcatcttcataattgaggctttgctcaaacttgtggcatttggttttcggaga
ttcttcaaagacagatggaaccagctggatctagccatagtcctgctctctatcatgggc
atcacactggaggagatcaagatgaatgcagcgctgccaatcaaccccaccatcatccgc
attatgagggtgctgagaatagctagagtactgaagcttttgaagatggctacaggcatg
agagccctgctggacacagtaatgcaagctttaccacaggtgggaaatctgggcttgctg
tttatgctcctcttcttcatttatgcggcacttggcgttgagctttttgggaaactagaa
tgcactgacgacaacccatgtgaaggattaagtcgacatgctacgtttgagaactttgga
atggcctttttaacattattcagagtatcgacgggggacaactggaatggcataatgaag
gacactctgcgagactgcaatccagaagaagataaaaactgccttcaatatctgcctctg
gtctcccccatctacttcgtcacctttgtgctgatggctcagtttgtgctggttaacgtg
gtggtggctgtattgatgaaacacttggaggagagcaataaggaggctaaagaagatgca
gaaatggacgctgagattgagatggagatgaaaatggctcggcgtctcagcaacgtctca
gcagggagttcttcagagcctgaaggcagggcaacatatgtaggaccacgcccagattca
cccagacaggatgaggggatgcaaagaacacaggagaatttactctctccacggaaaatg
tcagtgtcaaggatgcactctttgcccaatgacagctacatgtttcgccctgtgaggcca
gccagtgctccctatccacttgaagaagtggagaccagtcaagggtaccttgaattaggc
tccatcacctcagtccactcccagccatgcgaaagccgttccctgctccaggtccctggt
gttcctccccattcccaattcaactacctccccaagatcccccctcccattccctctcca
acccacagcataggcaggactttacgcagacaggaggcaatcaaaaatgattccatcgac
gtgcaaagtttcgactccaaagacaatcttgaaagacatgcagggataaccacaggcttc
aagctgcatgttcctcggatcggcggccccagcatccctcaggcgtcacccttgcttccc
ccacgtggacaatcacccagtgtccgcaccttccagcagccccttagccagcacaatatc
cattctcgacctcccagcctggccagcagcagcagaagcaccagccccagtggctccatg
tttgactccgctgatccgaccgacgaggaggtccgccacatcaacagtacagcgcggctg
tgggcaggggtccaggcagaagcacggagtcactcactgtctccttacgccacctcaggg
acgctgcttcccatgctcgtgaagaactgcagcagtgctgccaacttaggcgagttaagc
atcaaagacccgaagaagtgcttcagtgtggacactgagggttttctggaaaaaccccac
ggtaccgatgaccatcgcaggcactcaattgagatttgctcttcagtagatgatgggctg
tttggtcaagaactcagcgaaaagaggcacgttcctatgcgcggacagtcattgcacatt
ccacggaagaaaaagatgagccctccctgtatctccatcgagcctccatttgaaatggag
gcccctgcctctcttgcatccatgaaaaagctgtcagagagcagcatgttactccggagg
aggacgccatcctatgacctggccctgcagcgggactctctggatttgccggagaaccag
ctgtccacccagccgctcatcaaagtagagcggcacccctctcactgtgccgagtatctg
tccctgccgcaccccgccccaatgggcagtctggcaggcattctgtgtgaaagcacacag
ccaaccccctttgatagcagatttgaagaatccacggacttcagctctataaacaggaca
gcccaatga
DBGET
integrated database retrieval system
