Ctenopharyngodon idella (grass carp): 127508689
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Entry
127508689 CDS
T08802
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127508689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127508689
03036 Chromosome and associated proteins [BR:
cide03036
]
127508689
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127508689
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127508689
PBAF complex
127508689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Sarcoglycan_2
Motif
Other DBs
NCBI-GeneID:
127508689
NCBI-ProteinID:
XP_051742806
LinkDB
All DBs
Position
3:complement(33512424..33522749)
Genome browser
AA seq
423 aa
AA seq
DB search
MSKRPPYAPAPTPAPTTQMPTTPGFVGYNPYSHLAYNNYRLGGNPGGNNRNSSGITVPKP
PKPPDKPLMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNE
YEAEKIEYNDSLKAYHNSPAYLAYVNAKNRAEAALEEESRQRQSRLDKGEPYMSIQPAED
PDDYDDGFSMKHTAAARFQRNHRLISDILSEVVVPDVRSVVTTARMQVLKRQVQSLMVHQ
RKLEAELLQIEDRHQEKKRRFLESTDSFNNELKRLCGLKVEVDMEKLAAEMAAAEEAARR
RAEEREREAAEQVERAAQEEQQPAGVQANANTEQTSASESKDGEDKSTPMETETLAEASE
GSQEAEQGAGAAGEKPAQPEPAEGATDEGTSDSTAPSESSSGPPAEPQASDNTPEERLPT
QTQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcggccaccctatgcccctgcccccaccccagcccccacaacacaaatgccc
accacccctgggtttgtggggtacaacccatacagccatctggcctacaacaactacagg
ctgggagggaaccccggcgggaacaacaggaactcctcagggatcaccgttcctaagcca
cccaaaccgcccgacaagccgctgatgccctacatgcggtatagccggaaggtaagcagg
aaggtttgggaccaagttaaagcctctaatcctgacctgaaactatgggagattgggaag
atcattggtggcatgtggagggacctcactgatgaggagaaacaggactatttaaatgaa
tacgaggctgaaaagattgaatataatgactctttgaaagcctaccacaactctccagcc
tacctggcgtacgtcaatgctaagaaccgtgcggaagctgctctagaagaagagagccgg
cagagacagtcgcgcctagacaagggcgagccctatatgagcatccagcccgctgaggat
cctgatgactatgatgacggtttctccatgaagcatacagcggcagctcgtttccagagg
aaccacaggcttatcagcgacatcttgagtgaggttgtggtgcctgatgttcgctcagtg
gttaccaccgctcgcatgcaggtcctcaaacggcaagtccagtccctcatggtgcaccag
agaaagcttgaagcagagcttcttcaaatcgaggaccgacatcaggagaagaagaggagg
ttcctggagagcacagactccttcaataacgagctcaaacggctctgcggtctaaaagtg
gaggtggacatggagaagctggcagccgaaatggcggctgcagaggaggcagctcgccgg
agggcggaggagagagagcgggaagcagcagagcaggtggagagagctgctcaagaagag
caacagccagcaggggtccaggccaatgccaacacagaacaaacctccgccagcgagagc
aaggatggagaagacaagtccaccccgatggagactgagactctcgctgaagcttctgaa
ggatctcaggaggctgagcaaggcgcgggtgcagcgggagagaaaccggcccagcctgag
cctgcagagggcgcaacagatgagggcaccagcgacagcaccgctccatctgagagcagc
tccggacccccagcagaaccccaggcctcagacaacacccctgaggagcggctgcccacc
cagacacaataa
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