Ctenopharyngodon idella (grass carp): 127508705
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Entry
127508705 CDS
T08802
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127508705
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127508705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
HAGH_C
RNA_pol_Rpb2_2
MAGI_u5
Motif
Other DBs
NCBI-GeneID:
127508705
NCBI-ProteinID:
XP_051742853
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All DBs
Position
1:1918962..1944190
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AA seq
1109 aa
AA seq
DB search
MSLPSGSSDGTVTSDPSISSRKSQRSESPDPSCVSLKSNRSMTPPPAFSDEPVTSDPLQD
KTAAALQTHTLETEDLQRVKDQHKTSMKNKYERLFEGNKLQENETLLNRIYTQLYIIEGE
REGVNEEHEVLQMEKTARTQHSQDTPIYCNDIFKASPEPGCEEKDQIKTVLTKGIAGIGK
TVSVQKFILDWAEGKANQDIEFMFVLPFRELNLIRDRQYSLHRLLLDFHPELQDLASKIY
EECKVVFIFDGLDESRITLMSSDTQKVSDVTETSSVGVLMSNLMKGELLPSALIWITSRP
AAANQIPSKYINRLTEIQGFNEPQKEEYFRKRISDEHQASRIISHIKRARSLHIMCHIPV
FCWISSTVLQKLLKEDLSAEIPQTLTEMYSHFLLIQINMRNQKYEERDPEKLLQSNREVI
VKLAEVAFKQLMKGNVMFYEEDLRESGIDVTDASVYSGICTEIFKEESVIHQKKVYSFIH
LSVQEFLAALYVFYLYVVKNKKPLQVFLRKKHMGKQPKEYCVNLCELLRTAVDKALESEN
GHLDLFLRFLLGVSLESNQRLLQDILTHTENNSKSISQTITYIKDKIKDMRTVPYNLSTE
RSINLFLCLLEMKDQSLTREIQELVKSEKHSKTDVSPAHCSTVAYMLQMSEEVLDELDLK
KYNTSDVGRRRLIPAVINCRKAVLAGCNLTGQDCEIISSALQSSNSVLRELDLSNNDLQD
SGIKLLSDALKSQNCQLKILRLMLCNLTVQSCKCLSLALQSSNSVLRELDLSNNDLRDLG
VKLLSDGLMKAANSQLEILRLAMCNLTGQSCETVSSALQSSNCVLRELNLSNNDLRDSGV
KLLSVGLKSPNSQLQILSLSGCLVTEEGCGYVSSALSSNPSHLREVDLSYNHPGQSGVQL
LNDKLTDPNCSLQRLNLKCGGETRIRAGLEKYACDLTLDPNTANIHLMLSEHNRKATHVE
KKQSYTDYPCRFEHYPQVLCKESLTGRCYWEAEWSGGEADISVAYKGISRKGRRNECVFG
YNEMSWRLECTDDQFIFWHKFKSTILRVPSPLYKRVGVYLDVSAGTLSFYSVSDTHTLTH
LHTFNTTFTEPLYAGFSLCKCSVSLCQIK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccctctggatccagtgatggaacagtgacctctgaccccagtatcagcagt
aggaagagtcagagatcagagtctccagatcccagctgtgtttctctgaagagtaacaga
tccatgacgccaccccctgcattcagtgatgaaccagtgacctctgaccctttgcaggac
aaaactgcagctgccctgcagacacacacactggagactgaagacttgcagagagtcaaa
gaccagcacaaaaccagcatgaagaacaagtatgagagattatttgagggaaacaaactc
caagagaatgaaaccctcctgaacaggatctacacacagctctacatcatagagggagag
agagaaggagtgaatgaagaacatgaggttttacagatggagaaaacagccagaacacaa
cactcacaagacactccaatctactgcaatgacatctttaaagcctcacctgaaccagga
tgtgaggagaaagaccaaatcaagactgttcttactaaaggcattgctggaattggaaaa
accgtctctgtgcagaagttcattctggactgggccgagggaaaagccaatcaggatata
gaattcatgtttgtgcttccatttcgagagctgaacttgatccgagatcgtcagtacagt
cttcacagacttctgctggactttcatcctgaacttcaagatctggcctcaaagatttat
gaggagtgtaaagttgtgttcatctttgatggtctggatgaaagcagaatcacactgatg
tcttcagacactcagaaagtttctgatgtgactgagacttcatctgtgggtgtgttgatg
tcaaaccttatgaaaggagagctgcttccctctgctctcatctggatcacctccagacct
gcagcagccaatcagatcccctccaaatacatcaatcgtctgacagaaattcaggggttc
aatgagcctcagaaagaagagtatttcaggaagagaatcagtgacgagcatcaagccagc
agaatcatctcgcacatcaaaagagcaagaagcctccacatcatgtgccacatacctgtt
ttctgctggatctcatccactgtgcttcagaagctcctgaaagaagatctgagtgcagaa
atacctcaaactctgactgaaatgtacagccacttcctgctgattcagatcaacatgagg
aatcagaagtatgaagagagagatccagagaaactcctgcagtccaacagagaagtaatt
gtgaaacttgctgaagtggctttcaaacagctgatgaagggcaatgtgatgttctatgaa
gaggacctgagagagagcggcatagatgtcactgacgcctcagtgtattctgggatttgc
actgagatctttaaggaggaatctgtgattcatcagaagaaagtctacagcttcattcat
ctgagtgtccaggaatttcttgctgctctctatgtgttttatttatatgtagtcaagaac
aagaagccattgcaggtttttctgaggaaaaaacatatgggaaaacagcccaaggaatac
tgtgtgaatctgtgtgagcttttgagaacagcagtagacaaagcccttgagagtgagaat
ggacatctggatctgttcctgcggttcctgttgggtgtctcactggagtccaatcagagg
cttttacaggatatactgacacacacagaaaacaactccaagagcatcagtcaaaccatt
acttatattaaagacaaaattaaagacatgagaactgttccatacaatctttccactgaa
agatccatcaatctgttcctctgtctgctggaaatgaaagatcagtcactgaccagagag
attcaggagcttgtgaaatcagagaaacactcaaaaactgatgtctctcctgcccactgc
tcaacagtcgcctacatgcttcagatgtcagaggaggtgctggatgagctggacctcaag
aaatacaacacatcagatgtgggtcgaagaagactgataccagctgtgatcaactgcagg
aaagctgttcttgctggctgtaatctcactggtcaagattgtgaaattatatcctcagct
ctccaatcctcaaactcggtcctgagagagctggacctgagtaacaatgacctgcaggat
tctggtataaagcttctttctgacgcactgaagagtcaaaactgtcagctgaagatactt
agattgatgttgtgcaatctcactgttcagagctgtaaatgcttgtcattagctctgcaa
tcctcaaactctgtcctgagagagctggatctgagtaacaatgacctgcgggatttagga
gtgaagctgctttctgatggactgatgaaagcagcaaactctcagctggagatactgagg
ttggctatgtgtaatctcactggtcagtcctgtgaaactgtgtcatcagctctacaatcc
tcaaactgtgtcctgagagagctaaacctgagtaacaatgacctgcgggattcaggagtg
aagctactctctgttggactgaagagtccaaactctcagctgcagatactgagcttgtca
ggctgtttggtgacagaggaaggctgtggttatgtgtcttcagctctgagttcaaacccc
tcacacctgagagaggtggatctgagctacaatcacccaggacaatcaggagtccagctg
ctaaatgacaaactgacagatccaaactgctctctgcagagactcaatttgaagtgtggt
ggagagaccaggataagagcaggactggaaaaatatgcctgtgatctcacactggatcca
aacaccgcaaacattcatctcatgctgtctgagcacaacagaaaggcaacgcatgtggaa
aagaaacagtcatacactgattatccgtgcagatttgagcactatcctcaggttttgtgt
aaagagagtcttactggacgctgttactgggaggcagaatggagcgggggggaggctgat
atatcagtcgcatataaaggaatcagcaggaaaggaaggagaaatgaatgtgtttttggt
tacaatgaaatgtcctggaggttggagtgcactgatgatcaattcatattctggcacaag
ttcaagagcaccatcttacgtgtcccttcacccttatataagagagtaggtgtctatctg
gatgtgtcagctggcactctgtccttctacagcgtttctgacacacacacactcacacac
ttacacacattcaacaccacattcactgaacccctctatgctggatttagcctgtgtaaa
tgctcagtgtctctgtgtcagattaaatag
DBGET
integrated database retrieval system
