Ctenopharyngodon idella (grass carp): 127508726
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Entry
127508726 CDS
T08802
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127508726
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127508726
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Jagunal
Motif
Other DBs
NCBI-GeneID:
127508726
NCBI-ProteinID:
XP_051742956
LinkDB
All DBs
Position
3:complement(47400037..47428362)
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AA seq
1250 aa
AA seq
DB search
MNKGKQELININYEYKESMKMKLRPKYLNVCDREYAISVAACVFNSTSCKMSLDDRRKEA
VSVQTHEAASPEPSCVSMKSDRSMDPPIKLSDGELTSDPDTVCKVSLYEQRKEAVSVQIC
EAASPEPSCVSMKSDRSMDPPIKFSDGAPDTACKMSLIEQRKKVVSVQKHKAASPEPSCV
SIKRYRSMNDPPELSDGAVTSDPDTACKMSLYEEREEEEDVHTHKAASAEPSCVSMKSDT
SMRNPPHLSDGAMISDPKVKRDDVIRLVTPHLIRTDSDCQTLIRQRVKDQHKTSMKNKYE
TLFEGIKQQKNQTLLNRIYTQLYIIEGESEGMNEEHEVLQMEKTARTQDTPIYCNDIFKP
LHEPGCEEKDKIKTVLTKGIAGIGKTISVQKFILDWTEGKANQDVDFMFVLPFRELNLIK
DHQCSLYRLLLDFHPELKDLESKIYEECNVVFIFDGLDESRITLTFSDDEKLCDVNESSS
VGVLMSNLIRGELLPSALIWITSRPAAANQIPSKYINRVTEIQGFSELQKEEYFRKKICD
EYQASRIISHIRRSRSLHIMCHIPVFCWISATLLQKLLKRDDSAEIPQTLTEMYIHLLLT
QINMRNQKYNKRNPTKRLQSNRDVTLKLAKLAFNQLMKGNVMFYEEDLIESGIDVTEASV
YSGICTEIFKEESVIHQRKVYCFIHLSFQEFLAAFYEFYSHIVKKMKLQKLFQDNQYQLY
SQDISLYEFLISAVDKSLQSENGHLDLFLRFLLGISLESNQRLLKDLLLCTVNRSETIKR
ITQYIKIKIKGEERLSADRCINLFLCLLEMKDQTLYREIQEFVNSENHSVNRLSPSHCST
IAYMLQISEEVLEEFDLKKYNTSDEGRKRLIPAVVNCRKALFADCNLTGQLCESLSLFLQ
SSNSSLRELDLSNNDLKDSGVKLLSDGLKSSHCQLNILRLTHCNLTGQCCESLSSSLQSN
FSLRELDLSNNDLQDSGVKLLSVGMKKSHCQLNILRLSGCMVTEEGCCFLASALSSNTSH
LRELDLSYNYPGQSLVKLLSDPNYRLDKLNMDHSGEIRITTGPQKYACDLTLDLNTANTH
LTLSERNRKVTHVKEKQPYPDHPERFDECLQVLCRESLSGCCYWEAEWSGNVCISVAYKG
IKRKVWSEDCRFGNSEKSWSLSCCNDSFNVRHNNKITVISAPSHRSNRVGVYLNWSAGTL
SFYSVSDTHTLTHLHTLNSIFTEPLYAGFGFDYGSSVSLCEIKPLSVRNN
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggaaaacaagaactaattaatattaactatgaatataaagagtctatgaag
atgaaattaagaccaaaatatctgaatgtctgtgacagagagtatgcgatttcagttgca
gcctgtgtgtttaacagcacttcatgtaaaatgagtctcgatgatcggagaaaggaggcg
gtttctgttcagacacatgaagcagcatctccagaacccagctgtgtgtctatgaagagt
gacagatccatggaccctcccattaaactcagtgatggagaactgacctctgaccctgat
actgtctgtaaagttagtctatatgagcagagaaaggaggcggtttctgttcagatatgt
gaagcagcatctccagaacccagctgtgtgtctatgaagagtgacagatccatggaccct
cccattaaattcagtgatggagcacctgatactgcctgtaaaatgagtctcattgagcag
agaaagaaggtggtttctgttcagaaacataaagcagcatctccagaacctagctgtgtg
tctataaagagatacagatccatgaatgaccctcctgaactcagtgatggagcagtgacc
tctgaccctgacactgcctgtaaaatgagtctctatgaggagagagaggaggaggaggat
gttcacacacataaagcagcatctgcagaacccagctgtgtgtcaatgaagagtgacaca
tccatgagaaacccccctcatctcagtgatggagcaatgatctctgaccctaaagtgaag
agagatgatgtgatcagattagtgacgccccatctgatccgtactgactccgactgtcag
accctcatcaggcagagagtcaaagaccaacacaaaaccagcatgaagaacaaatatgag
accttatttgagggaataaaacaacaaaagaatcaaaccctcctgaacaggatctacaca
cagctgtacatcatagagggagagagtgaagggatgaatgaagaacatgaggttttacag
atggagaaaacagccagaacacaagacactccaatctactgcaatgacatctttaaaccc
ttacatgaaccaggatgtgaggagaaagacaaaatcaaaactgtccttactaaaggcata
gctggaattggaaaaaccatctctgtgcagaagttcattctggactggactgagggaaaa
gccaatcaggatgtagattttatgtttgtgcttccatttcgagagctgaacttgattaaa
gatcaccagtgcagtctttacagacttctgctggactttcatcctgaacttaaagatctg
gaatcaaagatttatgaggaatgtaatgttgtgttcatttttgatggtctggatgaaagc
agaattacactgacgttttcagatgatgagaaactttgtgatgtgaatgagtcttcatca
gtgggtgtgttgatgtcaaacctcatcagaggagagctgctaccctctgctctcatttgg
atcacctccagaccagcagcagccaatcagatcccctcaaaatacatcaaccgtgtgaca
gaaattcagggattcagtgagttgcagaaggaggaatatttcaggaagaaaatctgtgac
gagtatcaagccagcagaatcatctcacacattagaagatcaagaagcctccatatcatg
tgtcacatacctgtcttctgctggatctcagccactttgcttcaaaaactcctgaaacgt
gatgacagtgcagaaattcctcaaactctgactgaaatgtacatccacttactgctgact
cagatcaacatgaggaatcagaagtataataagagaaatccaacaaaacgtttgcagtcc
aacagagacgtgactctgaagcttgctaaactggctttcaatcagctgatgaagggcaat
gtgatgttctatgaggaggacctaattgagagtggcatagacgtcactgaagcctcagtg
tattctgggatttgcactgagatctttaaggaggaatctgtgattcatcagaggaaagtc
tactgcttcattcatctgagctttcaggagtttctagctgctttctatgagttttattcc
cacatagtcaagaaaatgaaattacagaagttatttcaagataaccaatatcagttgtac
agtcaggatatctctctgtatgagtttctaatatcagcagttgataagtccttacagagt
gaaaatggacatctggatctcttcctgcggttcctgctgggcatctcactggagtccaat
cagagactcttaaaggatctactgttatgcacagtgaacagatcagagaccatcaagaga
atcacacagtacattaaaatcaaaatcaaaggtgaagaacgtctctcagctgacagatgc
atcaatcttttcctctgtctgctggaaatgaaggatcagactctgtacagagagattcag
gagtttgtgaactcagagaatcactcagtgaatcgactttctccgtctcactgctcaaca
atcgcctacatgcttcagatatcagaggaggtgctggaagagtttgatctgaagaaatac
aacacatcagatgagggtagaaagagactgataccagctgtggtgaactgcagaaaagct
ctatttgctgactgtaatctcactggccagctgtgtgaaagtttgtctttatttctacaa
tcatcaaactcatcactgagagagctggacctgagtaacaatgacctgaaggattcagga
gtgaagcttctgtctgatggacttaagagttcacactgtcaactcaacatactgagattg
acacactgtaatctcactggtcagtgctgtgaaagtttgtcttcatctctacaatcaaac
ttctcactgagagagctggacctgagtaacaatgacctacaggattcaggagtgaagctt
ctgtctgttggaatgaagaaatcacactgtcaactcaacatactgagattatctggctgt
atggtgacagaggaaggctgttgttttctggcttcagctctgagttcaaacacctcacac
ctgagagagctggatctgagctacaattacccaggacaatcattagtcaagctgctttca
gatccaaactacagactggacaaactcaatatggatcatagtggagaaatcaggattaca
acaggaccacagaaatatgcatgtgatctcacactggatttaaacacagcaaacactcat
ctcactctgtctgagaggaacagaaaagtcacacatgtgaaagagaagcagccgtatcct
gatcatcctgagagatttgatgagtgtctgcaggttctgtgtagagagagtctgtctgga
tgctgttactgggaggctgaatggagcggaaatgtttgtatatcagtggcatataaagga
atcaagaggaaagtatggagtgaggactgtaggtttggaaacagtgaaaagtcctggagt
ctgagctgttgtaatgacagtttcaacgtcagacacaataataagatcacagtcatatct
gccccttcacatcgctctaacagagtaggagtgtatctgaattggtcggccggcactctg
tccttctacagcgtctctgacacacacacactcacacacttacacacactcaacagcata
ttcactgaacccctctatgctggatttggttttgattatggctcctctgtgtctctgtgt
gagattaaaccgctttctgtgagaaacaattga
DBGET
integrated database retrieval system
