Ctenopharyngodon idella (grass carp): 127508818
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Entry
127508818 CDS
T08802
Name
(RefSeq) transcription factor SOX-9b
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127508818
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127508818
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127508818
NCBI-ProteinID:
XP_051743155
LinkDB
All DBs
Position
3
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AA seq
454 aa
AA seq
DB search
MNLFDSYLKMSDEQDKSLSDAPSPSMSEDSAGSPCPSGSGSDSENTRAEQHLREFKKDEE
DKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSSKSKPHVKRPMNAFMVWAQAARRKLADQ
YPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQ
TEAEDGEQTHISPNAIFKALQQADSPASSMGEVHSPGDHSGQSQGPPTPPTTPKTDLPSS
KADLKREGRPLQEGIDFGAVDIGELSSDVISNMEPFDVNEFDQYLPPHGHPGIPASNSAQ
AYSAGYGLSTQAGGAAAHGWMSKQHSLSTMANGGEQSQGQQRTQIKTEQLSPSHYSERQG
SPQHVTYGSFNLQHYSTSYPSIGRTQYEYAEHQSPANSYYSHTTGQYPAFSYMSPSQRPM
YTPIADTTGVPSVPPAHSPQHWEQQPVYTQLSRP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcttcgactcctacctgaaaatgagcgacgagcaggacaagagtctctccgac
gcgcccagcccgagcatgtccgaggattccgccgggtctccgtgtccctccggatctggg
tcggacagcgagaacacccgagcggagcagcacctgagagagtttaaaaaggacgaggag
gacaagttccccgtgtgtatcagagacgcggtgtcgcaggttctgaaggggtatgactgg
accctggttcccatgcctgtccgagtcaacggctccagtaagagcaaaccgcacgtgaag
agacccatgaacgcgttcatggtttgggctcaagccgcgcgcaggaaactggcggatcag
tatccgcacctacacaacgccgagctcagcaaaaccctcgggaaactctggagactactg
aatgagggagagaagcgtccgtttgtggaggaggccgagcgtctgagggtccagcacaag
aaagaccaccctgactacaagtaccagcccaggcggagaaaatccgtcaagaacggccaa
accgaagccgaggacggcgagcagacccacatctctcccaacgccatattcaaagccctg
cagcaggccgactctcccgcgtccagcatgggtgaagtgcactcccccggagaccactca
ggtcagtcccaaggtccccccacacctcccacaacccccaaaacagacctgccatccagc
aaagcagacctgaagcgcgaaggccgtccgctgcaggagggcatcgactttggggccgtt
gatatcggtgagctgagcagtgacgtcatctccaacatggagcctttcgacgtcaacgag
tttgaccagtacctgcctcctcacgggcacccagggatcccggcctccaacagcgcgcag
gcgtactccgccggctacgggctcagcactcaggccggaggggccgcggcccacggctgg
atgtccaaacagcactcgttgagcacaatggccaacggcggtgagcagagccaaggccag
cagagaacgcagatcaagacagagcagctgagtcccagccactacagtgagcggcagggt
tccccacagcacgtcacctacggctccttcaacctgcagcactacagcacctcctacccc
tccatcggccgcacgcagtacgagtacgccgagcaccagagtcctgccaactcctactac
agccacaccacgggccagtatcccgctttcagctacatgagccccagccagaggcccatg
tacactcctattgccgacacgacaggcgtcccgtccgtgccgccggcgcacagcccgcag
cactgggagcagcagccggtctacacccagctgtcccggccgtga
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