Ctenopharyngodon idella (grass carp): 127509034
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Entry
127509034 CDS
T08802
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127509034
03037 Cilium and associated proteins [BR:
cide03037
]
127509034
Transporters [BR:
cide02000
]
Other transporters
Pores ion channels [TC:
1
]
127509034
Cilium and associated proteins [BR:
cide03037
]
Other cilia and associated proteins
Stereociliary proteins
127509034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
127509034
NCBI-ProteinID:
XP_051743421
LinkDB
All DBs
Position
3:26272617..26281444
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AA seq
667 aa
AA seq
DB search
MRRMSIFPQHGTALGLTANEIRQEVENNTSELVSDLVNLSARARFQAIRSLPMSFNERKT
IRNRVNSVKLSKTILPADCRQQVSRSFRRFRTNLASARQRLVVWQDTLKEIGGRFGTSVL
SYFLFLKWLLKFNLFSLLINFCFITIPQIVHAPNISSVTGFRGLELLTGVGYFNQTVLFY
GGYNGEVIVSTAAYNMQLAYFFTIAAYLVLCGLSLLYSISRSFQNNFVLETGPVSGGAWR
LLCSWDFSVVNEKAIQYNKNNLGIQLKESLSERLQEKNKMSLSDRIKHLSLHLLAWLLSL
GLALGSGAGIYFLGTEQLTFSFDHDPNDLKAEASTLLLPVVVALINLIVPLLYSLISKME
SYSNPRAQIYISIVRNVILKMSLLGILCFYWLNDVPNKISCWESFVGQSVYRLLIIDFIF
CLFGIFFGEFLRNVIGTMCIQSLGVPEFDIARNVLDLIYAQTLAWIGIYYSPLLPVMQVL
KLFIIFYLKKVSLSMNCQPPKHTGRAAQIQTVFIALLFFPSFVGALAMVSFTVWRLQPSD
QCGPFQGLNTPFYAIFNWINSIRGFPESNWVWWIFENILRSELFYYLITLIVLVITFFLW
QITQGRKELIKTLREQIANEGKDKAFLLNKLQTIRKQRREMTPYRPQDFDQTPHFNPNWM
NTLPLDM
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggatgagtatattcccacagcatggcacagctctgggacttactgcaaacgaa
atccgacaggaagttgaaaacaatacatctgaactggtatcagacctggttaacctgtca
gctagagccagatttcaagcaattcgatcattacctatgtcatttaatgagaggaaaaca
atcaggaacagagtgaactccgtcaagctctcaaagaccatactccctgcagactgtcgt
caacaggtgtcccggtctttccgcagattccgcaccaacttggcatcagccaggcagcgt
ttggttgtatggcaggacaccctgaaggagattgggggcaggtttggcacttctgtcctc
tcctacttcttgttccttaagtggctgctgaagttcaacctcttctccctcctcatcaac
ttctgcttcatcacaatcccacaaattgtgcatgcgcccaatatcagcagcgtcacaggg
ttcagaggacttgagctcctcacaggggtgggttatttcaaccagacggtcttgttctat
ggtggttataatggtgaagtgattgtatccacagcagcctacaacatgcaattggcctat
tttttcaccatagctgcatatctggtgctgtgtgggctgtctcttctctacagcatatcc
agatcctttcagaacaactttgtgctagagacaggacccgtctctggaggagcatggcgt
ctcttgtgcagctgggacttcagtgttgtcaatgaaaaagccatacagtacaacaagaac
aacctcggcattcagctgaaggagtccttatcagaaaggttacaggagaaaaacaaaatg
tctctgtctgacagaataaagcatctgtctctccacctactggcctggctgctctcttta
ggactcgccctaggctctggtgcaggcatatacttcctggggacagaacagctgaccttc
agtttcgatcacgatccaaatgatttaaaggctgaggcatctactctgcttctgcctgtg
gttgtggcgctcatcaacctgatagtgcctctcctctactcccttatcagcaaaatggag
agctactccaatccacgcgcacagatctacatcagcatcgtgagaaacgttattttgaag
atgtcccttcttggaattctttgcttttactggctgaatgacgttcccaacaaaatctca
tgttgggagtcctttgtggggcagagcgtgtatcgactgctgataattgacttcatattc
tgtctatttggcattttctttggggaattcctacgcaatgtaatcggaaccatgtgtatc
cagagtcttggcgtcccagagtttgacattgcgaggaatgtacttgatttgatctatgcc
cagactctggcttggattggaatttactactcccccctacttcctgtaatgcaagtcctt
aaattgtttatcatcttttacttgaaaaaggtcagtctgagcatgaactgtcagcctccc
aaacacactggcagagccgcacagatacagacagtcttcatcgccctgctcttcttcccc
tcgtttgtgggtgctctagccatggtatcattcacagtgtggaggctgcagccctcagat
cagtgtgggccattccagggtctcaacacccccttctatgccattttcaattggatcaat
tcaattcggggctttcctgaaagtaactgggtctggtggatatttgaaaacatactcaga
agtgaactcttctactatctgattaccctcatcgtcctagtcatcactttttttctctgg
caaatcacgcagggacggaaagagctcatcaagacactgcgagagcagattgcgaatgaa
ggaaaggacaaagcatttctcttgaataaactacaaactataaggaagcagagaagggaa
atgacaccttacagacctcaggacttcgaccagacaccacatttcaacccaaactggatg
aatactctgccattggatatgtga
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