KEGG   Ctenopharyngodon idella (grass carp): 127509065
Entry
127509065         CDS       T08802                                 
Name
(RefSeq) interferon phi 3
  KO
K05414  interferon alpha
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04060  Cytokine-cytokine receptor interaction
cide04217  Necroptosis
cide04620  Toll-like receptor signaling pathway
cide04621  NOD-like receptor signaling pathway
cide04622  RIG-I-like receptor signaling pathway
cide04623  Cytosolic DNA-sensing pathway
cide05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cide00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    127509065
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    127509065
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    127509065
   04621 NOD-like receptor signaling pathway
    127509065
   04622 RIG-I-like receptor signaling pathway
    127509065
   04623 Cytosolic DNA-sensing pathway
    127509065
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127509065
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cide04052]
    127509065
Cytokines and neuropeptides [BR:cide04052]
 Cytokines
  Interferons
   127509065
SSDB
Motif
Pfam: Interferon DUF4358
Other DBs
NCBI-GeneID: 127509065
NCBI-ProteinID: XP_051743496
LinkDB
Position
3:complement(23008233..23010488)
AA seq 187 aa
MDLHRVAWLCTFFCFAQVWSLPTNCILRKDLMEKTRTFIETAGGLFPSQCLDDHVSISFP
KNVFESSNTLQVTGVEKAVYQTLQKIDALFENYSAPDQWDEEKMTDFQGILYRQIEESKC
IMSKSGAEEDFPSREASLKVYFEAISSTLKEKDFSFCAWEIVRSEILRTLNFILKHNSDI
MYESPQP
NT seq 564 nt   +upstreamnt  +downstreamnt
atggaccttcatcgtgtggcttggctgtgcacctttttctgctttgcgcaggtctggtct
ttgccaacaaactgcatccttaggaaggacttgatggagaaaacccgtacatttatagag
actgcgggtggccttttcccttcgcaatgcctggacgaccacgtttccatatctttcccc
aaaaatgtgtttgagtccagtaacacgcttcaggttactggtgttgaaaaggctgtttac
cagacactccagaaaattgacgcactgtttgagaactacagtgctccagaccagtgggat
gaagaaaaaatgactgactttcaaggcatcttataccggcagattgaggagagcaaatgc
atcatgagcaagtctggagcggaagaggattttcccagcagagaagcctctcttaaggtt
tacttcgaagctatatcctcaactctgaaagaaaaggatttcagtttctgcgcatgggaa
atcgtgagaagtgagattctccgcaccctgaacttcatattgaagcacaactctgacatc
atgtatgaatctccacaaccctag

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