Ctenopharyngodon idella (grass carp): 127509065
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Entry
127509065 CDS
T08802
Name
(RefSeq) interferon phi 3
KO
K05414
interferon alpha
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04060
Cytokine-cytokine receptor interaction
cide04217
Necroptosis
cide04620
Toll-like receptor signaling pathway
cide04621
NOD-like receptor signaling pathway
cide04622
RIG-I-like receptor signaling pathway
cide04623
Cytosolic DNA-sensing pathway
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127509065
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
127509065
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127509065
04621 NOD-like receptor signaling pathway
127509065
04622 RIG-I-like receptor signaling pathway
127509065
04623 Cytosolic DNA-sensing pathway
127509065
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127509065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cide04052
]
127509065
Cytokines and neuropeptides [BR:
cide04052
]
Cytokines
Interferons
127509065
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF4358
Motif
Other DBs
NCBI-GeneID:
127509065
NCBI-ProteinID:
XP_051743496
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Position
3:complement(23008233..23010488)
Genome browser
AA seq
187 aa
AA seq
DB search
MDLHRVAWLCTFFCFAQVWSLPTNCILRKDLMEKTRTFIETAGGLFPSQCLDDHVSISFP
KNVFESSNTLQVTGVEKAVYQTLQKIDALFENYSAPDQWDEEKMTDFQGILYRQIEESKC
IMSKSGAEEDFPSREASLKVYFEAISSTLKEKDFSFCAWEIVRSEILRTLNFILKHNSDI
MYESPQP
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcatcgtgtggcttggctgtgcacctttttctgctttgcgcaggtctggtct
ttgccaacaaactgcatccttaggaaggacttgatggagaaaacccgtacatttatagag
actgcgggtggccttttcccttcgcaatgcctggacgaccacgtttccatatctttcccc
aaaaatgtgtttgagtccagtaacacgcttcaggttactggtgttgaaaaggctgtttac
cagacactccagaaaattgacgcactgtttgagaactacagtgctccagaccagtgggat
gaagaaaaaatgactgactttcaaggcatcttataccggcagattgaggagagcaaatgc
atcatgagcaagtctggagcggaagaggattttcccagcagagaagcctctcttaaggtt
tacttcgaagctatatcctcaactctgaaagaaaaggatttcagtttctgcgcatgggaa
atcgtgagaagtgagattctccgcaccctgaacttcatattgaagcacaactctgacatc
atgtatgaatctccacaaccctag
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