Ctenopharyngodon idella (grass carp): 127509126
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Entry
127509126 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04120
Ubiquitin mediated proteolysis
cide04137
Mitophagy - animal
cide04144
Endocytosis
cide04340
Hedgehog signaling pathway
cide04350
TGF-beta signaling pathway
cide04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127509126
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127509126
04350 TGF-beta signaling pathway
127509126
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127509126
04137 Mitophagy - animal
127509126
09144 Cellular community - eukaryotes
04520 Adherens junction
127509126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127509126
04121 Ubiquitin system [BR:
cide04121
]
127509126
03029 Mitochondrial biogenesis [BR:
cide03029
]
127509126
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127509126
Membrane trafficking [BR:
cide04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127509126
Autophagy
Mitophagy
Other mitophagy associated proteins
127509126
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
HECT type E3
127509126
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127509126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
127509126
NCBI-ProteinID:
XP_051743581
LinkDB
All DBs
Position
3:complement(35689748..35734709)
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLVENEGPVFEDSGPGRPLSCFMEEPM
PYTDPTGAAGGGNCRALESPNQEQRLQAQRIRNQDSRGHAHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQHSQVKESSQALPVQMEVGMEEGDGELPVRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLGKPIQLCDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGKNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDNK
ELELIIGGLGKIDLNDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcgaaggaacgggtcaagcatcaaaatccgactgacagtatta
tgtgccaagaatctggcaaagaaagacttcttccggttgcctgatcctttcgccaaagtg
gtggtggatggctcgggtcaatgccactctacagacacggtcaaaagcacactggacccc
aagtggaatcagcattacgacctgtatattgggaagaccgattccatcaccattagtgta
tggaaccataagaagatccataagaaacagggggcgggtttcttaggctgtgtgcggctc
ctgtccaatgccatcagcagactaaaagacacaggctaccagcgtttagacttgtgcaag
ttgaacccatctgacagtgatgctgtccgtggacaaatcgttgtgagcctgcaaaccaga
gacagaattggcagtggagggcctgtggtcgactgtagaggactggtagagaatgaaggg
cccgtttttgaggactcggggcccggacggcctctcagctgcttcatggaggagcccatg
ccatacacagatcccacaggggccgctggcggaggaaactgccgtgcacttgagtcaccc
aatcaggagcagcgactccaagcacaacggatcagaaatcaagattcccgagggcacgca
cacaccccccaaaaccgaccacacggacaccagtcccctgacctccctgagggctacgag
caaaggaccactgtgcagggccaagtctattttctgcacacacagactggcgtgagcacc
tggcatgatcctagaataccccgggatttgaacagcgtgagttgtgaggagctgggccct
ctgccgcccggctgggagatcaggagcactgtgtcaggacgaatttattttgtcgaccac
aataatagaaccacgcaattcaccgaccccaggttacaccacatcatgagccagcactct
caggtgaaggagtcgagccaggctctgcccgtacagatggaggttggaatggaggagggt
gacggggagttaccggtgcgctacgagagagatctggtacaaaaacttaaagttctccgg
catgagctctccctgcagcagcctcaggccggccactgccgcatagaagtgtcccgtgag
gagatctttgaggagtcttataggcagatcatgaagatgagacccaaagacctgaagaag
cggctgatggtgaagtttagaggagaggaggggctggattacggtggtgttgctagggag
tggttatatcttctctgtcatgagatgctaaatccatactacggcctgtttcagtactca
actgataacatctacacactacagatcaacccagattcatccatcaaccctgaccacttg
tcttacttccactttgttgggcggattatgggtctggctgttttccatgggcactacatc
aatggaggcttcactttgcctttctacaagcagctcctggggaagccaatccagctttgt
gaccttgagactgtggacccagagctgcacaagagcctcgtctggatcctagagaatgac
atcacatctgttttggaccacactttctgcgtagaacataatgctttcggcaaattcctc
caacatgagctgaaaccaaatggcaagaacatcccagtcacagaggagaacaagaaagaa
tatgtgaggctgtatgtcaactggaggttcatgcgaggcattgaggcccagttcctcgcc
ttgcagaaaggcttcaacgaactcattccacagcatctgctcaagccttttgacaacaag
gaacttgagctgatcatcggtggtttggggaagatcgatctgaacgactggaaggccaac
acgcggcttaagcactgtgtggctgacagtaacatagtgaagtggttctggcaggcagtt
gaatcgtttgacgaagagaggagaggcagactgctacagttcgtcacaggctccacacgc
gttcctctacaaggcttcaaagcactgcaaggttctacaggttctgcaggaccaagactc
ttcactattcatttaattgatgccaacacagacaacctgcccaaagcccacacatgcttc
aaccgaatcgacatcccgccttacgagtcatacgagaagctctacgagaagctcctaacg
gccgtggaggagacgtgtggctttgcagtggagtga
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