Ctenopharyngodon idella (grass carp): 127509139
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Entry
127509139 CDS
T08802
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04514
Cell adhesion molecule (CAM) interaction
cide04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127509139
04517 IgSF CAM signaling
127509139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127509139
Cell adhesion molecules [BR:
cide04515
]
Immunoglobulin superfamily
NGL family
127509139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
ig
LRR_14
V-set
LRRNT
Ig_2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
127509139
NCBI-ProteinID:
XP_051743601
LinkDB
All DBs
Position
3:complement(28423385..28472439)
Genome browser
AA seq
730 aa
AA seq
DB search
MRITTVTSLPSPSPLLLLLVQLLLRLILPGQDAVGAASTCPTLCSCSNQASRVICTRRNL
EEVPDSISNNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLINLRYLNLGMCGLKDIPNLTPLVRLEELELSGNRLEIIRPGSFQGLESLRK
LWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTSMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADVSVNYTYFTTVTVETVETTGEEDSALRAINETFIHIPTTP
PGHLWREVPTTPSSLSILGSSSSPRATKPTFTVPISEPNYPSGLDDVMKTTKIIIGCFVA
ITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGTGIRGSGISGGSTVPQG
GSGGQSLRLHHPEIVSLPNLARAEHLNHYYKAHHFNNNMMGLGLGGGSGGGLNNNNNPSP
CSQAQNTPISCTQVPVSAGITSCSMPTPMALPTLGIHGSIKTLMSKGQNPQIEPLLFKSG
SKENVQETQI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgaccagccttcctagtccctcccccctcctcctcttattggtt
cagctgctgttgcggctcatcctcccaggccaagacgcagttggagccgcctccacctgt
cccacgctgtgcagttgttctaatcaagctagtcgagtgatctgtacaagacgaaactta
gaagaggtgccagacagtatatcaaacaacacacgatacctcaacttacaggagaactcg
atacaggtgataaaatcagacacattcaaacatttacggcacctggagatcctccagctc
tccaagaaccagattcgtcaaatagaggtgggtgctttcaatggcctcccaaacctcaac
actctggaactgttcgacaaccgcctcacgctggtgccatcgcaagcctttgagtatctc
agcaagctgcgggaactgtggttacgaaacaatccaatcgagaccttaccaggctatgcc
tttcaccgcgtcccctcgctgcgacgtcttgatcttggcgaactcaaaaagctggattat
atatctgacgcagcctttgttggacttatcaacctgcgctacctgaacttgggtatgtgt
ggcctgaaggacattcctaacttgactccccttgtgcgactggaggagctagagttgtct
gggaaccgtctagaaatcatcagacctggttccttccaaggcctggaatctctgcgcaaa
ctatggctcatgcactctcagatgtcagtcatcgagcgcaatgctttcgatgatctcaag
aacctagaggagctcaacctatcccacaattcccttcactctttgccccatgatcttttc
acacccttgcagaagctagagcgagttcacctcaatcacaacccttgggtgtgcaactgt
gacgtgctgtggctaagctggtggctgaaagaaaccgtgccgagcaacacaacctgctgt
gcacggtgccacgcaccaccctacttgaagggaaagtacattggagagctggaccagagt
catttcacctgctatgcccctgtcattgtagagccgcccactgacctcaatgtgaccgag
ggcatggctgctgagctcaagtgtcgcaccggtacttccatgacttctgtgaactggatc
acaccgaatggcaccctaatgacccatggctcctatcgggtcaggatttctgtgctgcac
gatggcacacttaatttcaccaatgtaactctgcgtgacactggccaatacacttgcatg
gtgaccaactcagctgggaacactacggcaactgctgtcctgaatgtgaccgcagcagac
gttagcgtcaactacacctactttaccacggtcactgtagaaactgtggagactacggga
gaggaagattctgcattgcgtgccatcaacgagaccttcatccacattcccacaacacca
cctgggcacctctggcgtgaagtgcccactactccctcttctctctcaatccttggctca
tcatcttctccccgagcaaccaaacccactttcacagtacccatttctgagcccaactac
ccctctggactagacgatgtgatgaagaccaccaagatcatcattggttgctttgtggcc
attaccttcatggccgctgtcatgctggtggtgttctacaagctgaggaagcagcaccag
ttgcacaaacaccacgggccggcacgagccatcgagatcattaacgtcgaagatgagatc
ggagcaggaacgggcatccgcggcagcggcatttcaggaggatccacagtaccgcaagga
gggtccggcggacagagcttgcgactgcaccaccctgaaatcgtcagcctcccaaacctt
gcacgagcagagcatctcaaccattactacaaggcccatcacttcaacaataacatgatg
ggtctgggccttggtggaggctcgggcggaggcctaaacaataacaacaacccttcgcct
tgctcccaggcccagaatacccccatctcttgcacgcaggtgccagtctctgcaggtatt
acatcgtgctccatgcctactccaatggctctgccgacccttggcatccacgggtcaata
aaaaccctgatgagtaaagggcagaacccacagatcgagccgttactcttcaagagtggc
tccaaggagaatgtccaagaaacccagatctga
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