Ctenopharyngodon idella (grass carp): 127509369
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Entry
127509369 CDS
T08802
Name
(RefSeq) serine/arginine-rich splicing factor 2b
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127509369
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127509369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127509369
Spliceosome [BR:
cide03041
]
Common components
Common spliceosomal components
SR proteins
127509369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_8
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127509369
NCBI-ProteinID:
XP_051743978
LinkDB
All DBs
Position
3:43047713..43053895
Genome browser
AA seq
217 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGAILDGRELRVQMARYGRPPDSYYGGRRGGGAARRHGGHGRRSR
SPRRRRRSRSRSRSRSRSRSRSRYSRSRSRSYSRSRSKSHTPRKRKSKSPSRSRSRSRSK
SRSRSRSRTPASNRGSKSRSRSKSQPKSAGDEGPASS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggcaggcctccgcccgacgtagagggcatgacttcgttaaaagtggataat
ttaacgtaccgcacgtcgccggagaccctgaggcgcgtctttgaaaagtacggccgagtc
ggggacgtttatattccccgagatcgatacacgaaagagagccgggggttcgccttcgtg
cgctttcacgacaagagggatgccgaagatgcgatggacgcgatggatggagcgattctg
gacgggcgagagctccgggttcagatggcgcgctatggtaggccgcccgactcctactac
ggcgggcgtcgcggcgggggagccgctagaagacacggcggacatggccgacgcagccgg
agtccgaggcgtcggagacgcagccgttccagaagcaggagccgctctcgttcccgcagc
cgttcccgttacagcaggtcgcgttcacgttcctattcccgctctcgctccaagtcacac
actccccgcaagaggaagtccaagtctccttccaggtctaggtcacgttctcgatccaaa
tccaggtcccgttccagaagccgcacacctgcatcgaacagagggtctaagtccaggtcg
aggtctaaaagccagccaaagtctgctggggatgaaggacctgcatcatcctaa
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