Ctenopharyngodon idella (grass carp): 127509391
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Entry
127509391 CDS
T08802
Name
(RefSeq) G1 to S phase transition 1, like
KO
K03267
peptide chain release factor subunit 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127509391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127509391
03012 Translation factors [BR:
cide03012
]
127509391
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127509391
Translation factors [BR:
cide03012
]
Eukaryotic type
Release factors
127509391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
127509391
NCBI-ProteinID:
XP_051744023
LinkDB
All DBs
Position
3:complement(32524901..32536109)
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AA seq
577 aa
AA seq
DB search
MDPIDTAPDSWDQEDDGEAQVDVQLSKALSTTLNVDAKPFVPNVHAAEFVPSFRPKGSSE
TVESAGPETDANVEVSEPESPPMENGDAEMATDDTWEQKGSEPSEAEAEPGGPEGDGGQA
EEDSPQEEGMEEEEVPTPKVALTQPNAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD
KRTLEKYEKEAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH
KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKM
DDPTVNWSLERYEECKEKLLPFLKKVGFNPRKDVHFMPCSGLTGANLKEPAEYCPWYIGL
PFIPHLDSLPNFNRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHTVE
VLSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCNAENLCHTGRTFDAQIVIIEH
KSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQVCIARLRTAGT
ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAEKD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggacccgatagacactgcccctgattcctgggatcaggaggacgatggcgaggcccag
gtcgacgtgcaactttccaaggctctttctaccaccctaaacgtggacgccaagccgttt
gtccccaacgtgcacgccgcagaattcgttccatccttccggccgaagggctcctcggaa
actgtggagtcagcgggtcctgaaacagatgccaatgtggaagtgtcagagcctgagtct
ccgcccatggagaacggtgatgcagagatggcaacagatgacacctgggagcagaaaggg
agtgagcccagtgaggcggaggcagagccaggaggccctgaaggagacgggggtcaggct
gaagaagactcccctcaagaggaaggaatggaggaagaagaagtgccaacacctaaagta
gccctcacacagccaaatgcccccaagaaggaacatgttaacgtggtctttattggccat
gtcgatgctggcaagtcaactattggaggacaaatcatgtatttaacgggaatggtggac
aaacgaactctggagaagtatgaaaaagaagccaaggaaaagaacagggaaacttggtac
ctctcctgggcccttgacacaaaccaggaggaaagagacaaaggaaagactgtggaagtc
ggacgtgcttactttgagacagagaaaaagcactttaccattctggatgcaccaggccac
aaaagctttgtgcccaacatgattggtggtgcttcacaggccgatttggcagtgctggta
atctctgcaaggaaaggagagtttgaaacaggctttgagaaaggaggccagacgcgagag
catgccatgttggccaaaactgctggagtaaagcatttgattgtacttgtaaacaaaatg
gatgatccaacagtcaactggagtctggagaggtacgaagaatgtaaggagaagcttctt
ccatttttgaagaaagttgggttcaaccccaggaaagatgttcattttatgccatgttcg
ggacttactggggccaacctaaaggagccggcggagtattgcccttggtatatagggtta
ccattcattccacatctggacagtttgccaaacttcaacagatcaagtgatggaccagtc
aggttacccattgtagacaaatataaggacatgggcactgttatattggggaaattggag
tcgggatcaatcagtaaagctcagcaacttgtgatgatgcccaacaggcacactgtggag
gtgctgagtttgctttctgatgacgtcgaaaccgatgatgccggacctggagagaacttg
aagttgcggctcaaaggcattgaagaggaggagatcctgccgggcttcatcctctgcaat
gctgagaatctttgccacactgggcgcacctttgatgcccagatagtaatcattgaacac
aagtcaatcatctgcccaggttacaacgcagttcttcacatccacacctgcattgaagaa
gtgcaaattacggccttaatctgtctggtagacaaaaagacaggggacaagagcaaaaca
cgaccccgcttcgtcaaacaggaccaggtgtgcattgctcgtctgagaacagctgggacc
atctgccttgagaccttcaaagatttccctcagatgggacgcttcaccttacgagatgaa
gggaaaaccattgccattggaaaagtgttgaaacttgttgccgagaaggactga
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