Ctenopharyngodon idella (grass carp): 127509528
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Entry
127509528 CDS
T08802
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03440
Homologous recombination
cide03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127509528
03460 Fanconi anemia pathway
127509528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cide03032
]
127509528
03400 DNA repair and recombination proteins [BR:
cide03400
]
127509528
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127509528
DNA replication proteins [BR:
cide03032
]
Eukaryotic type
DNA Topoisomerases
127509528
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
127509528
FA (Fanconi anemia) pathway
127509528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
127509528
NCBI-ProteinID:
XP_051744265
LinkDB
All DBs
Position
3:complement(35411530..35420651)
Genome browser
AA seq
1008 aa
AA seq
DB search
MNVLHRSLRVTIHSQFYRQISVNMIRRTQIKKVLCVAEKNDAAKGIAEIMSNGRSRRREG
YSVYNKIYEYEYNLFGQNVTVNMTSVSGHLLGLEFKAPFQKWHSCNPVLLFDAEVEKYCP
ENFIPIKRTLEREVRQCQALVIWTDCDREGENIGFEIIDVCKAVKPNIQVFRARFSEITP
NSIRRACETLTEPNINISDAVDVRQELDLRIGASFTRFQTLRLQKIFPESLSDQLISYGS
CQFPTLGFVVERFKAIQAFVPETFFKIKVVHEPNEEESVEFGWKRHRLFNHTACLVLYQM
CMEDPTAKVISVTSKPKSKWRPLPLDTVELEKLASRKLRISAKETMKTAEKLYTQGFISY
PRTETNMFPQNLNLTLLVEQQTQDNEWGNFAQRILESGGPTPRNGNKSDQAHPPIHPTKY
TNSLQGNEKRLYEFIVRHFLACCSKDAQGQEVTVEIEIAEERFSASGLTIIARNYLEVYP
YDKWYNKVIPLYRPDTTFQPTAIEMVEGQTSPPQLLTEADLISLMEKHGIGTDATHAEHI
ETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKDK
ASVLRYHVAKYKAVFIESVRKAKKLDEALSNYLGPAQEITEQEQGEMEIPLPVRKCPQCN
RDMVLKKKKDSTGMFLSCMGYPACKAAVWFPDTVLEVSRDESICSTCRPHPVHMLKFKFK
RGSLPPMMPLEFVGCIGGCDETLREVLNLKYLRGGEADSGSRINNGSGSNQHHVPRTSSA
PPSRVENVRPPAPRPRADGNRPPASLPPPRAAQPPASAQGGAIVCNCGQDALLLTVRKEG
PNQGRQFYKCNTGDCKFFLWADQPAEQAAPGGNRGPLSQNFQPPRPSNGFGNMPQQRQNN
RGSGGDEGETMCNCNEPAVTRTVMKDGPNKGRMFHTCGKPRDQQCGFFQWANENVAPATG
FSGGNGGKHPGNKKAGAAPNKPPTAKRPRTCGICHEPGHTRVTCPQGQ
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttgcataggtcactaagagtgacaattcatagtcaattttataggcaaata
tctgtaaacatgataagacgcactcagattaagaaagtgctttgtgttgctgagaaaaac
gacgccgctaagggcatagcagagatcatgtcaaatgggagatcgagaagaagagaaggc
tactctgtctacaacaaaatatatgagtatgaatacaacctgtttgggcaaaatgtaact
gtaaacatgacatcagtatcagggcatctcttgggtcttgaattcaaagctccttttcag
aaatggcatagttgtaatccagtcctgttgtttgatgctgaggtggaaaagtactgccct
gaaaactttataccaatcaagaggactttggagagagaagtaagacagtgtcaagctctg
gtcatttggactgattgtgaccgagaaggagagaatatcggctttgagatcattgatgtc
tgcaaagcagtgaagccaaacattcaggtcttccgtgcacggttctctgagatcacccca
aactccataaggagagcctgtgaaaccctcactgagccgaatatcaacatcagtgatgct
gtggatgtgagacaggagcttgatctccgcatcggagcatcgtttactaggttccagaca
ttacgcttgcagaagatattcccagaatctctctccgatcagctcatcagttatggcagt
tgtcagtttccaacccttggctttgtagtcgagcggtttaaagcaattcaagccttcgtc
cctgaaactttctttaaaatcaaagttgtccatgagcctaacgaagaggaatcagtagaa
ttcggctggaagagacatcgtcttttcaaccacacagcatgccttgtgctgtatcagatg
tgcatggaggatcccacagcaaaagtgatatctgtaacaagtaaaccaaaaagcaaatgg
cgacctttaccccttgacactgtggaacttgaaaaactggcttcaagaaaattgaggata
agtgccaaagaaaccatgaaaaccgcagaaaagctgtacactcaagggtttatcagttat
cctcgcactgagaccaacatgtttccacagaacctgaaccttaccctgctggttgagcaa
cagacacaagataatgaatggggaaattttgctcagcgcattttggaaagcggtgggccc
acacctcgaaatggaaacaaatcagatcaggcccatcctcccattcaccccaccaaatac
accaacagtttacagggaaatgaaaaacggctgtatgaattcattgtacggcactttctg
gcctgttgctccaaagatgcccagggtcaagaggtgacggttgaaattgaaatagctgaa
gagcgattctctgctagtggattgacgatcattgcgcgcaattatctggaagtgtaccct
tatgacaagtggtacaataaggtaattccattatatagacctgacaccacgttccagccc
acagcgattgagatggtggaaggacagaccagtccaccacagcttttgacagaggccgat
ttgatatcgctcatggagaagcatggcattggtactgatgcaacacatgctgaacacatt
gagaccataaagagtcgtatgtacgtggggctgacggctgaccagaggttccttcctgga
gagctcggcatgggtcttgttgaagggtataactcaatggggtatgagatgtctaaacca
gacctgagagcggagctggaggccgatcttaaacttgtgtcagagggccgaaaggacaaa
gcttctgtcctcagatatcacgtggcaaaatacaaagctgtttttattgaatccgtgagg
aaggcaaagaaattggatgaagccttgtccaattatctgggcccggctcaggagattacc
gaacaggagcagggagagatggagataccattacctgtgcgaaaatgtccacagtgtaac
cgtgacatggtgctgaagaagaagaaagacagtacagggatgtttctttcatgtatggga
tatccagcttgtaaagcagccgtgtggtttccagacacagttttggaggtcagcagagat
gagagcatctgttcaacgtgccgtccgcatccggtgcatatgctgaagtttaaattcaag
agaggaagtttgccacctatgatgccccttgaatttgttggctgcattggaggatgtgat
gagactctcagagaggtcttgaacttaaaatatctcagaggaggagaagcagattctggc
tctcggattaataacggctctgggtcaaatcagcatcatgtacctagaaccagctcagca
cctccatccagggtggagaacgtgagacctccagcacccagaccccgagccgatggcaac
cgccccccagccagtctgccacctcctcgggcagcacaaccaccagcttcagcccagggc
ggtgccattgtgtgtaactgtggtcaggatgcccttcttctcactgtacgcaaagagggt
cccaaccaaggccgtcagttttacaagtgtaacacaggggattgtaaattcttcctgtgg
gctgaccagccggctgagcaggcagcgcctggtggaaacagaggacccctaagtcagaat
tttcaacctcccaggccttcaaatggctttgggaacatgcctcagcagaggcaaaacaac
agaggatctggaggtgatgaaggtgaaaccatgtgtaactgtaatgagcctgcagttacc
aggactgtcatgaaagatgggccaaacaagggccgaatgttccacacctgtgggaaacca
cgtgatcagcagtgtgggttcttccagtgggcaaacgaaaatgtggctccagccacaggt
ttttctgggggaaatggtggtaaacatcctgggaacaaaaaggccggcgctgccccaaac
aagcctcccactgccaaaaggccgaggacctgtggaatatgtcatgagccgggtcatacc
cgggtcacctgtcctcagggccagtga
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