Ctenopharyngodon idella (grass carp): 127509557
Help
Entry
127509557 CDS
T08802
Name
(RefSeq) integrin alpha-IIb
KO
K06476
integrin alpha 2B
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
cide04810
Regulation of actin cytoskeleton
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127509557
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127509557
09142 Cell motility
04820 Cytoskeleton in muscle cells
127509557
04810 Regulation of actin cytoskeleton
127509557
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127509557
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127509557
04515 Cell adhesion molecules [BR:
cide04515
]
127509557
04090 CD molecules [BR:
cide04090
]
127509557
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127509557
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127509557
Cell adhesion molecules [BR:
cide04515
]
Integrins
Integrin alpha subunits
127509557
CD molecules [BR:
cide04090
]
Proteins
127509557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
127509557
NCBI-ProteinID:
XP_051744358
LinkDB
All DBs
Position
3:23582576..23601514
Genome browser
AA seq
1046 aa
AA seq
DB search
MKKKLEVSLLFFTGYLFIFMYPNHISGFNLDLNKYTVFSGPEDSYFGFSVDFYQSSSKSI
SVVVGAPRANTSQPGISHGGSVFMCPWTSSGESCQTLNFDQKGDENITFGNMLLMAHKSN
QWLGASVRTYNNFILACAPMFHWNVLLEKEEAMNTPVGNCQLLNMRTGELANYAPCREEY
VESIYTRGYPDRRYCEAGFTTDITENGRVILGAPGGYYFQGHIITASLANIMRSGSTFSP
KHSVSGETKTPQRLDYYDLYLGYSVASGQFNEDRIPDYVVGVPNDLHTAGSVKIINAATV
PLQIMKAISGTQIASYFGHSVAVTDINKDGWDDILIGAPLFMEQLSNQKFREVGQVYVYL
QRKGFFFSSRPNQMLTGTYAYGRFGSAIAPLGDIDHDGFNDVAVGAPGSGEGGQVFIYLG
QSDGLTTQYVQVIESPFRTLKDPPMFGFSIRGGTDIDDNGYPDLIIGAWGASKVATYRAQ
AVVRTQARLSFFPELLNPEDKFCQLHQSSTFITCFVIMACISVSGHRIPEEIVLNTELQL
DRMKQNMARRTLLLDSNQPYTYFQLTVQRNSGDVCRNFTAYLLPEFKDKLSPIFFSVNYS
LADSQDAVLHGQSVAVGQTRIILNCGHDNICIPDLKLKAVASTEPILIGDENPALLIIEA
ENQGEGAYETELYISPPAHTHYQGVVSNRQDFSHLVCGQKKENGSVIVVCDLGNPMEGGH
QLKAGLYFSMGGLEQVENHITFQMQIRSKNSQNPDSNLVQLQVNVNAAASLEMRGVSSPV
DCVLPIAKWEPKDYPEDINEVGPLVEHVYELRNMGPSPVNAKLTLEFPVSQNESYLLYVF
ANASQELISCQTDYSNIDPRGLVKLESSNVTIGQVHHFNKRDLSQKTEYEQQWQHTVHVN
CSSGDQCLLFECEAAGLQRDERAIVRVMSRLWVQTFLKRPYVNYVLHSTAHYEVKDVPSK
IQPVVLPRGKAQTHTNIVWRRPDGQEEVPVWWIVVSVIAGLLLLAALSTIFWKVGFFKRN
RPPSDDDGDDTQHLNGDQNEMSDCKS
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaagctggaagtcagtctgctgttttttactggatatttgttcatattcatg
tatccaaatcacatcagtggctttaacctggatctgaacaaatacaccgtcttctctggc
cctgaggacagctactttggtttctcagtcgacttttatcagtcaagcagcaaaagtata
agtgtggtggttggagcacccagagcaaacaccagccagcctgggatctctcatggcggc
tctgtcttcatgtgtccctggacatcaagcggagaatcgtgtcagacattaaactttgac
caaaaaggtgatgaaaacatcacgtttggtaacatgctcctaatggctcacaaatcaaac
cagtggctgggcgcttcagttcgaacctacaacaacttcatcttggcctgtgcccctatg
tttcactggaacgtgcttttggaaaaagaggaggccatgaatacacctgttgggaactgc
cagcttttgaacatgcgaacaggagagttggcaaactacgccccctgcagggaagaatat
gtagagtcgatttacaccagaggctatcctgacaggcgttactgtgaggctggatttacc
acagacatcacagagaatggcagagtgatacttggtgcaccaggaggctattattttcaa
ggtcatatcatcactgcatctcttgcaaacatcatgagaagtggcagcacgttctctccc
aagcactcagtgagcggtgagaccaaaacaccacaaagacttgactactacgacctgtat
ctgggatactctgttgcttctgggcagtttaatgaagaccgcatcccagattatgtcgtt
ggggtcccaaacgatctgcacactgcaggctctgtcaaaataataaacgctgcaacagtg
cctctgcaaatcatgaaggcgattagtggcacccagatagcatcttattttgggcattct
gtggcagtaacagatattaacaaagatgggtgggacgacatcctgattggagcgccgctt
tttatggagcagctgtccaatcagaaatttcgagaagtgggacaagtatatgtttacctg
caaagaaagggcttcttcttctcctccaggcccaaccagatgctgacagggacatatgcc
tatgggcgttttggcagcgctatcgcccctttgggagacatcgaccatgatgggtttaat
gatgtagctgtgggggcacctggctctggtgaagggggtcaagtgtttatttaccttggt
cagagtgatggtttgaccacccagtatgttcaagtaattgagagcccatttcgcaccctc
aaagatcctccaatgtttggcttcagcataagaggagggacagatattgatgataatggc
tatccagatctcatcattggtgcttggggtgcgagcaaagtggcaacttacagagcacaa
gctgtagtgaggacacaggctcgactctcattcttccctgaacttttgaaccccgaagac
aaattctgccaactccaccagagcagcaccttcattacttgctttgtaataatggcatgc
atcagtgtatccggacacagaattcctgaggagattgtgctcaacactgagcttcagctg
gacaggatgaagcagaacatggccagacgaaccctcctactggactccaaccagccatac
acatacttccaactcacggtgcaaagaaactctggagatgtctgtaggaacttcacggcc
tacctattgcctgagtttaaggacaagttaagtccaatcttcttctcggtgaactacagc
ctggctgactcccaagatgcagtgctgcatggacaaagtgtcgctgttggacagacaagg
ataatactaaactgtggtcatgataacatctgtattccagacctgaagctgaaagcagta
gcgtcaacagaaccaatcctgatcggcgatgagaatccagcgctgctgattatcgaggcc
gaaaatcagggagagggagcttacgagactgagctatatatcagcccgccagcacacaca
cactatcagggtgttgtgagcaaccggcaggacttcagtcacttggtttgtggtcagaag
aaggagaacggctcagtcattgtggtttgtgatctaggaaaccccatggagggtggacat
cagctgaaagcaggtctttacttcagcatgggtggcctggaacaagtggagaaccacatc
acattccaaatgcaaatacgaagtaagaacagtcagaacccagacagtaacctggtccaa
ttacaggttaatgttaatgctgcagcttccctggagatgcgtggagtctcttctcctgtt
gactgtgtcctgcctattgctaaatgggagccaaaggattatccagaagacataaatgaa
gtaggcccactcgtagagcatgtatatgagctaagaaacatgggtcctagtccggtcaat
gcaaagcttacactggagtttcctgtctcacaaaatgagtcctatctgctgtatgtgttt
gctaatgcctcccaagaactcatctcctgtcaaacagactactccaacatcgacccacgt
gggttggtgaagctggagtcctccaacgtcaccataggccaagttcatcatttcaacaaa
cgcgacctgtcgcaaaaaacagaatatgagcagcagtggcaacatactgtccatgtgaac
tgctctagtggtgaccaatgtcttctgtttgagtgtgaggctgcgggactgcagagagat
gagagggccattgtaagagtgatgagtaggctgtgggtacaaaccttcttaaagagacca
tatgtaaattacgttcttcactccacggctcactatgaggtgaaagatgtgccctcaaaa
atccagccagttgtcttgcccagaggaaaagcacagacacacacaaatatagtgtggaga
cgcccagatggacaagaggaggttcctgtttggtggatagtagtgtcagtcatcgctggg
ctccttctactggctgccctgagtacaatcttctggaaggtgggatttttcaagcgtaac
cgtcctccaagtgacgatgatggtgatgacacgcagcacctgaatggtgaccagaacgag
atgtcagactgcaaatcttga
DBGET
integrated database retrieval system
