Ctenopharyngodon idella (grass carp): 127509612
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Entry
127509612 CDS
T08802
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04020
Calcium signaling pathway
cide04080
Neuroactive ligand-receptor interaction
cide04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127509612
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127509612
04082 Neuroactive ligand signaling
127509612
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127509612
Ion channels [BR:
cide04040
]
Ligand-gated channels
Glutamate (ionotropic)
127509612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
127509612
NCBI-ProteinID:
XP_051744454
LinkDB
All DBs
Position
1:38171409..38286702
Genome browser
AA seq
1777 aa
AA seq
DB search
MGVGLAMFKGLYLHSSAMLVSLHLSSSPFSDRRVLSFVSLASSSKPALSLSLLLLSLFFF
PTCECRRGGGIGTPVGGMSGGERGQSIISPPHYPPPGVNPVGPPLPPKFAQGLSIAVILV
GNSSEVSLSEGLEKEDFLHVPLPPKVELVTMNETDPKSIINRICALMSRNWLQGVVFGDD
TDQEAIAQILDFISAQTHIPILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASVMLNIME
EYDWYIFSIVTTYYPGYQDFVNRIRSTVENSFVGWELEEVLLLDMSVDDGDSKIQNQMKK
LQSPVILLYCTKEEATTIFEVAHSVGLTGYGYTWIVPSLVTGDADNVPSVFPTGLISVSY
DEWDYGLEARVRDAVAIIAMATSTMMLDRGPHTLLKSGCHGTPDKKGSKSGNPNEVLRYL
MNVTFEGRNLSFSEDGFQMHPKLVIILLDKERQYDRVGKWENGSLTMKYHVWPRFELYSD
AGEREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLQNQTGDSGIYIKRCC
KGFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINE
ERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF
EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAF
FAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQHPNDFSPPFRFGTVPNGSTERNIRN
NYKEMHSYMTSFHQKNVNEALHSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIF
ATTGYGIAIQKDSGWKRAVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDVDN
MAGVFYMLGAAMALSLITFIAEHLFYWQLRFCFMGVCSGKPGITFSISRGIYSCIHGVQI
EENKSALNSPSATMNMNMNNTHSNILRLLRTAKNMTSVPGVNGSPHSALDYSHRESAVYD
ISEHRRSLAGHTDCKPPPYLPEDNMFSDYVSEVERTFGNLHLKDSNLYQDHYLHHHGGTG
SELALGMSGPLPNRPRSLGSASSLEGGYDCDSLGGGVAPIFTTQPRQSLTHRNREKFDLI
AGHPTQSSFKSGLPDLYGKFSFKGGASSSGFIAGHDRYCGGGGVGSGGDDGNIRSDVSDI
STHTVTYGNLEGHGKRRKQYRDSLKKRPASAKSRREQDEIELGFRRRPHHTIHHHHHHHP
ATQAHRSATPPVERKSQRGGNCTSYLFRDKDNLRDFYVDQFRAKEGASPWEHLDLSDAPG
MGGGVGLGGGGCGGVVSSGGAGGACTSLVPMEDFLKGKSKKTECKGGMGGGSPGQQGHAC
WEKGIGGVGGLAGGDWECRNCHSGGVGSGGSKPVCMHGGGGAGGYPAAGGVGGSSGGSGQ
ISSRPSSASCKRCDSCKKPGNLYDISEDNHLLLDQIGAKHLLESGKGGGGTGAQTQVQRR
KFGPGGKVLRRQHSYDTFVELQKEGAGRMGGFGGSGGASMLPPPRSVSLKDKDRYMEGAS
PYAQMFEQYAGGERETTYFGDRGKGGGSSFSLFRGGEGGLHRRSVGERDMRDRDRGMMGG
GVGGTRGVGTYSLSKSLYPDKVNQNPFIPTFGDDQCLLHGAKSYYIKKQQAQPQQQQTPQ
QQQQLLNNSRADFRGSMGVTSYLPASATSGVLSNVAPRFPKELCLGGPLGNHHGGGPSNN
KLLSARDGLGMGQGQRPFNGSSNGHVYEKLSSIESDV
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgggctggcaatgttcaagggactgtatcttcactcctccgccatgcttgtc
agcctccacctctcctcttcccctttctccgaccgtcgcgtcctgtctttcgtctccctt
gcttcctcttccaaaccggccctctccctctcgctgcttctcctctctctcttcttcttc
cccacctgcgagtgtcgccgtggaggcgggatcgggacgcccgtcgggggcatgagcggt
ggcgagcgaggccaatcgatcatcagccctcctcattatcctccgccaggagtcaatcca
gtgggtcctcccttgccaccaaagtttgctcaaggccttagcatcgcagtgatccttgtg
ggaaactccagcgaggtgtctctctctgaaggtctggagaaagaggacttcctacatgtg
cctcttcctcctaaagtcgagctggtcacaatgaacgaaaccgaccccaagagtatcata
aaccgcatctgtgctctaatgtcacggaactggctccagggtgtggtgtttggggatgat
accgatcaggaggccatcgcccagatattggacttcatctcggctcagacgcacatcccc
atcctgggcatccgtggaggctcttccatgatcatggccgccaaggatgaccattccatg
ttcttccagtttggtccctctatagagcagcaagcctctgtcatgcttaacataatggag
gaatatgactggtacatattctccatcgtcaccacctactatcctggatatcaggacttt
gtcaatcggatccggagtaccgttgagaacagttttgttggctgggagctggaagaggtg
ctgctcttggacatgtcggtagacgatggtgactcaaagatccagaaccagatgaagaag
ctccaaagtcctgttatactactgtactgcactaaagaagaagccacaaccattttcgag
gtggcacattctgtcggcctcactggttacggttacacctggatcgtaccgtctctggtc
acaggggatgcagataatgtacccagcgtctttccaacaggtttgatctctgtttcctac
gatgagtgggactacgggctggaggctcgagtgcgtgatgctgtagccataatcgccatg
gcaacctccacaatgatgctggatcggggtcctcacacgctgcttaagtctggatgccac
ggcacacctgacaagaaaggcagcaagtcaggaaaccccaacgaggtgctgaggtacctc
atgaatgtgacatttgaagggcgcaacctctccttcagtgaggacggttttcagatgcac
ccaaagttggttattatactgttagataaggagaggcaatatgacagggtcggtaaatgg
gagaatgggtctctgacaatgaagtaccacgtgtggcctcggttcgagctgtactcggat
gctggggagcgagaggatgaccacctgtccattgttacgctggaggaggctccatttgtt
attgtggaggatgtcgaccccctcagtggcacctgcatgaggaatacagtgccgtgcaga
aaacagctcaaactccaaaatcagacaggagattcagggatctacattaaacgctgttgc
aagggcttctgtatagacatccttaaaaagatcgccaagtctgtaaaattcacctacgat
ctctacctggtgaccaatgggaagcatggcaaaaagatcaatggcacatggaatggcatg
gttggagaggtggtgcttaagaatgcccacatggcagtggggtccctgaccataaatgaa
gagaggtcagaggtcattgacttctctgtgcccttcatagagacagggattagtgtcatg
gtctctcgtagcaacggcacagtgtctccttctgcctttttagagcccttcagcgctgat
gtctgggtaatgatgttcgttatgctgttgatagtttcagctgtggctgtcttcgtcttt
gagtacttcagccctgttggctataatcgctgcttggcagatggacgagagcctggcggt
ccctccttcaccattggaaaagctatttggctactttggggtttggtcttcaataactct
gtgcccgtgcagaaccccaaaggcactactagcaagatcatggtatcggtctgggctttc
ttcgctgtgattttcctggccagctacactgccaacctggccgcatttatgattcaagag
gaatatgtggaccaggtgactggcctgagtgataaaaagtttcaacatccgaatgacttt
tcccctccgttccggttcggtactgtgcccaatggcagcaccgagagaaacataaggaat
aactacaaggagatgcacagctatatgaccagcttccaccagaaaaacgtaaacgaggcc
ctccacagcctgaagacgggtaaattggatgcatttatctacgatgcagcggtcttgaat
tacatggccggacgtgatgagggctgtaaactggtgaccattggcagcggttatatcttt
gccactacagggtatgggattgccattcagaaagactcaggctggaagagggcagtggac
ctcgccattctgcagctttttggagatggtgagatggaggaacttgaggccctgtggctg
actggcatctgccacaatgagaaaaatgaggtgatgagcagtcagctggatgtagacaac
atggcaggtgtgttctacatgctgggagctgcaatggccctgtcccttatcacattcatc
gcagagcacctcttctactggcaactgcgattctgcttcatgggtgtgtgctcgggcaag
cccggcatcactttctccatcagcaggggcatctacagttgcatccatggtgttcagatc
gaagagaacaaatcagcccttaactcaccatcagccactatgaacatgaacatgaacaac
acccactccaacattctccgtttgttgcgtactgccaaaaacatgacctctgtgcctggg
gtcaatggttcacctcacagcgcattggactacagccatcgtgagtcagccgtttatgac
atcagtgaacaccggcgcagcctagcaggccacacagactgcaagcctccaccgtacctg
ccagaggacaacatgttcagcgactatgtaagcgaggtggagaggacttttgggaacttg
cacctgaaggacagcaacctgtaccaggatcattacctacaccaccatgggggcacggga
tccgaactggctctcggtatgtcgggtcccctgcctaaccgacctcgtagcttagggagt
gccagttcattggagggtgggtacgattgtgacagcttagggggaggggtagcgcccatc
ttcaccacccagccacggcagtcgctgacacatcggaacagggaaaagtttgacctgatt
gcaggtcacccaacccagtcaagcttcaagtctggcctgcctgatctatacggaaagttc
tccttcaagggtggggcatccagttcagggtttattgcaggacatgacaggtactgtggg
ggaggtggggtgggatcaggaggggacgatggaaacattcgatccgacgtatctgatatt
tccactcacaccgtgacctatgggaacctcgaagggcacggcaaacggcgcaagcagtac
agggacagcctaaaaaagagacccgcttctgccaaatctcgccgtgagcaggatgagatt
gagcttggcttcaggagacgcccccaccacactatccatcatcatcaccaccatcatcct
gcaacacaagcacaccgctcagccaccccgcccgtggagcgcaagagtcagagaggtggt
aactgcacctcctatctattcagagacaaagataatttgagggacttctatgtggaccag
ttccgagcaaaggaaggggcatccccatgggaacatttggatttaagtgatgctccagga
atgggtggaggagtgggactgggcggaggcggttgcggtggagtagttagtagcggtggt
gctgggggagcgtgcactagtttggttcccatggaagatttcctgaaaggtaaatctaag
aagacagaatgtaagggtggaatgggaggaggatcacctgggcaacagggccatgcatgc
tgggaaaagggcatcggaggggtgggagggttggctggaggggattgggaatgtcgcaat
tgccacagtggaggggttggaagtggaggaagcaagccagtttgcatgcatgggggaggc
ggggctgggggctatccagctgctgggggagttgggggatccagtggagggagtggacaa
atctcaagccgccctagttcagcctcctgcaagcggtgtgattcgtgcaagaaaccgggc
aacttgtatgacatcagtgaggacaaccacctccttttggatcaaattggggccaagcac
cttctggaaagcggaaagggagggggaggcacaggggcccaaacccaggtacagaggcgg
aaatttggcccaggtggtaaggttttgcgcaggcagcactcttatgacacatttgtagag
ctgcagaaggaaggggcaggcaggatgggtgggtttggaggcagtggcggagcgtcaatg
cttcctccaccccgaagcgtgagcctaaaagacaaagaccgctacatggagggcgcaagc
ccctacgcccagatgtttgagcagtatgcgggaggggagcgggagacaacatattttggg
gacagagggaagggtgggggttcatcatttagcttatttcgtgggggtgaaggtgggttg
caccgtcgctccgtgggtgagagagacatgagggacagggatagaggcatgatgggagga
ggtgtgggcggtacccgaggggtcgggacttactccttgtctaaatctctctacccagat
aaggtgaaccagaacccattcatcccaaccttcggcgatgaccagtgtctattacacggt
gccaaatcatactacatcaaaaagcagcaggcacagccgcagcagcaacagacgccgcag
cagcagcaacagctcctcaacaacagtcgggctgacttccggggctccatgggggtgact
tcctatttgcctgcttccgcaacttctggggtgctgtccaatgtggcccctcggttcccc
aaggagctatgtctgggcgggcctcttggcaaccaccacggtggaggacctagcaacaac
aagctgctgtcagcaagggatgggttaggaatgggtcaaggacagagaccgtttaatgga
tcaagcaatggacatgtttatgagaagctttccagtatagagtccgatgtctga
DBGET
integrated database retrieval system
