Ctenopharyngodon idella (grass carp): 127509618
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Entry
127509618 CDS
T08802
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127509618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127509618
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
127509618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Med8
Motif
Other DBs
NCBI-GeneID:
127509618
NCBI-ProteinID:
XP_051744471
LinkDB
All DBs
Position
3:complement(30911852..30923447)
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AA seq
532 aa
AA seq
DB search
MTSLGSSSSSTTEYVVRVPKNTNKKYNIMAFNSGDKVSCSTWTQARMERDMSNRRIYGEE
ESQEGAAGSEFGKKQREESRRKKYGIITKEFKVEDQPWILKVNGKAGRRFKGLKKGGVTE
NASYYIFTQCADGAFEAFPVHAWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGDEDEEEGEKGGKKKKKKGGRGGDLRIHDLEDDLEMSSDESDGSNGEDDETKS
KGKKDKGPKGKGKKKKKGSDLEGFEDSDDGDFEGLEVDYMSDESSSEEEEQEKTKPNKGE
DVPKGIDEMSESEEESEEENKNEEDAKEEEEEEDGKKTPVQVEKKKKKESSGESDSSEDS
DIEGEAASALFMVKKRTPPKRGGGRGSAGSSRTGSRPGTPSIDNAATSNTLRAAANKLEQ
GKRQTTIPSSETPAAKRLKMEPSPQSSSGKSTPQPASGKSTPSSSDVQLTEDAVRRYLIR
KPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNINEKMHFYLTE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacatcactggggagcagcagttcctccacgacggagtatgtagttcgagttcctaaa
aacaccaataagaaatacaacataatggctttcaattctggtgataaagtcagttgttcc
acctggactcaggctcgtatggagcgggacatgagtaataggcgtatatatggtgaggag
gagagtcaggagggggcggcaggcagtgagtttggaaagaaacagagagaggaatcacgg
aggaagaagtatggcatcattacgaaggagttcaaggtggaggaccagccctggatcctt
aaagttaacggcaaggcaggaagaagattcaagggtctaaaaaaaggcggagtcacagag
aacgcttcctactacatcttcacacagtgtgctgatggtgcctttgaggcgtttcctgtg
cacgcctggtataacttcacaccgcaggccaaacaccgcacactcacagctgaggaggca
gaggaagagtggggcaggaggaacaaggtggtgaaccactttagtatcatgctccagcga
cgtctccgagaacaagagcgaggagacgaggatgaggaggaaggagaaaaaggagggaag
aaaaagaagaaaaagggaggcaggggtggagacctgcgcatacatgacctcgaggatgac
ctggaaatgagcagcgatgagagcgacggcagcaatggagaggatgatgaaaccaagtcg
aaaggtaaaaaggacaaaggccccaaaggcaagggaaagaagaagaaaaagggcagcgac
ttggaaggattcgaggatagtgatgatggcgactttgaggggttggaggtggactacatg
tctgatgagagcagttctgaagaagaggagcaagagaagaccaagcctaataagggagag
gatgtccctaaaggaattgatgaaatgtctgagagtgaagaagaaagtgaggaagaaaac
aagaatgaggaagatgccaaggaggaagaagaggaggaagatggaaagaagacaccagtg
caggtggaaaagaagaaaaagaaagaaagcagtggcgagtcagacagctctgaggacagt
gatattgaaggcgaggcagcttcagcactgttcatggtgaagaagcgcacacctcctaag
cgagggggcgggcgtggctcagcaggtagttcaagaacaggaagtcggcctggcacacct
tctatcgacaacgctgccacttcaaacactctacgtgccgctgccaacaaactggaacaa
ggtaagcggcagacgacaataccaagctcagagactccggcggcaaagagattaaagatg
gagcccagccctcagagctcttcaggaaagagcacaccccaaccagcatcagggaaatcc
acccccagctccagtgatgtgcagctgacggaggatgccgtgcgcaggtatctcatcagg
aagcccatgaccactaaagacctgctgaagaagttccagactaagcgcacaggcctcagc
agtgagcagacggtcaacgtgctcgcccagatcttgaagaggcttaacccagagaggaag
aacatcaatgaaaagatgcacttctacctcactgagtga
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