KEGG   Ctenopharyngodon idella (grass carp): 127509660
Entry
127509660         CDS       T08802                                 
Name
(RefSeq) integrin beta-3a
  KO
K06493  integrin beta 3
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03266  Virion - Herpesvirus
cide04081  Hormone signaling
cide04145  Phagosome
cide04148  Efferocytosis
cide04510  Focal adhesion
cide04512  ECM-receptor interaction
cide04810  Regulation of actin cytoskeleton
cide04820  Cytoskeleton in muscle cells
cide05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    127509660
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    127509660
   04512 ECM-receptor interaction
    127509660
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127509660
   04148 Efferocytosis
    127509660
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127509660
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127509660
   04810 Regulation of actin cytoskeleton
    127509660
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127509660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cide04131]
    127509660
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cide04147]
    127509660
   04515 Cell adhesion molecules [BR:cide04515]
    127509660
   04090 CD molecules [BR:cide04090]
    127509660
Membrane trafficking [BR:cide04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    127509660
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127509660
Cell adhesion molecules [BR:cide04515]
 Integrins
  Integrin beta subunits
   127509660
CD molecules [BR:cide04090]
 Proteins
  127509660
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_TEN EGF_Teneurin DUF4621 vWA_SIBA-E BNR_6
Other DBs
NCBI-GeneID: 127509660
NCBI-ProteinID: XP_051744499
LinkDB
Position
3:complement(24526048..24539879)
AA seq 784 aa
MGLNLMEVWVPVLLLVSSAASSNICTSRGVSTCKECLSIHPTCAWCSQEIFGKGGSGISR
CDLKDHLIQSGCGVKFIEFPVSSMRTLEDVPLSDKAGGSASDITQIQPQKIHLTLRPDDS
KQFTVKVKQVSDYPVDLYYLMDMTNTMKDDLQKLYALGNDLATALRRVTSNLRMGFGAFV
DKPLSPYMYINSEEIIRNPCYKSNEVCPPQFGYRNVLSLTEQVERFTEEVKKQKVSRNRD
SPEGGFDAIMQAVVCKEKIGWRPDASHLLIFTTDDRSHLALDAKLAGIVQPHDGECYINN
NNEYDKSTILDYPSLGMITDKISENNINLIFAVTSNTIPLYRNYSELIPGSAVGMLSEDS
GNVVQLILDAYAKIRSKVELELLGVPDELSLFVNATCLDGQVIAGVRSCGGLKIGDTVSF
NIEAKLHGCPKEKSQTFILKPTGFKDSLQVTVDFACECGCQQSSEPASPSCHHGNGTLEC
GVCLCDPGRLGSRCECSEGEYNPSQQDSCSPNPETPVCSGRGDCVCGQCACRSSDFGKVW
GPYCECDDFSCLRSKGQLCSGNGECNCGSCHCSSGWSGESCDCSTRTETCMGGGEMLCSG
RGHCMCGVCECTQPGAYGSTCEKCPTCPDACTIKKECVECKHYKRGDLFEKNCNHVCRDE
IVLMDELVFHEKNAVNCSYKDEDDCVQNFQYYEDASGKSFLYLVKEPDCPKGPDVLVVVL
SVTGAILLLGLAAIFVWKLLITIHDRHEFAKFEEEKAKAKWEAANNPLYKGATSTFQNVA
YRGS
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgggactaaatttgatggaagtttgggtaccagttttacttctagtttcctcagctgca
agctctaacatttgcacttccagaggagtgagtacctgtaaagaatgtctgtcgatccat
ccaacctgtgcttggtgctctcaagagatctttggaaagggagggtcaggaatatcccgg
tgtgatctcaaagaccatctcattcagtctggttgtggcgtgaagtttattgagtttcca
gttagcagtatgaggaccctagaggatgtacctctgagtgacaaggcagggggttcagcc
agcgatatcactcagatccaaccccaaaaaatccacctaaccctcaggccagatgattca
aagcaattcacagtcaaagtgaagcaagtatctgattacccagttgacctgtactacctg
atggacatgaccaataccatgaaggacgacctgcagaagctttatgcacttggcaatgat
ctggccactgccttacgtcgcgtcaccagtaatctgcgcatgggattcggagcttttgta
gacaaaccgctctcaccttatatgtacattaactctgaagaaatcatcaggaatccttgc
tataagtctaacgaagtctgcccaccgcaattcggctaccgtaatgtactgtctctaacg
gagcaagtagagcggttcacagaagaagtgaagaaacagaaagtgtccagaaacagagat
tctcctgagggaggatttgatgctatcatgcaagcagtagtatgcaaggagaagattgga
tggaggcctgatgcatctcatttgctgatcttcacaactgatgacagaagtcatttggct
ttggatgcaaagctggccggaatcgttcagccccatgatggagagtgctacatcaataac
aacaatgaatatgacaagtccactatactggactatccttcacttggcatgatcacggac
aagatatctgagaataacatcaacctcatctttgctgtaaccagcaatacaattccacta
tatcgaaattacagcgagctgattcctggctctgcggttggaatgctctccgaagactct
ggaaatgttgtgcaactcattctggatgcatatgcgaagatcaggtctaaggttgagctg
gagctgttgggtgtgccagatgagttatctctattcgtcaacgcaacatgcctggatgga
caggtcattgcaggtgtccggtcctgcggcggactcaaaatcggcgatacggtttcattc
aacattgaggcaaaacttcacggctgtcccaaagagaagagtcagaccttcattctgaag
ccaacgggctttaaagacagccttcaggtcactgtggactttgcttgtgaatgtggctgt
cagcagtcctccgagcccgctagcccatcctgtcaccacggcaatggaacgctggagtgc
ggcgtgtgcctgtgcgatccgggccgactgggctctcgatgtgagtgctccgagggcgaa
tataatcccagccaacaagacagctgtagccctaacccagagacgccggtctgtagcgga
cgcggagactgtgtgtgcggccaatgtgcctgtcgctcgagtgattttgggaaggtttgg
gggccgtactgtgaatgtgacgacttcagctgcctccgttccaaaggacagctgtgttca
ggtaatggtgagtgcaactgtgggtcttgtcactgtagttctggatggtccggcgagagc
tgtgactgttcgacccgcacagagacctgtatggggggtggagaaatgctctgtagtggg
cgtggccactgcatgtgtggcgtctgtgagtgcactcagccaggagcttatggatcgacc
tgtgagaaatgtcccacctgcccagatgcctgcaccatcaaaaaggagtgtgtggagtgt
aaacactataagagaggggatctgtttgagaagaactgcaatcacgtctgcagagatgag
attgtgctgatggatgagctggtctttcatgagaagaacgcagtgaactgcagctacaag
gatgaggatgactgtgttcagaacttccagtattatgaagatgccagtggaaaatccttt
ctctatcttgttaaagaaccagactgtccgaaaggtcctgatgtcttggtggttgtccta
tcggtcactggtgcgatcctgctgctgggtttggctgcgatttttgtgtggaagctcctg
atcaccattcacgaccgtcatgaatttgccaagtttgaggaagagaaagccaaggctaag
tgggaagcggctaataatccgctctacaaaggagccaccagcaccttccaaaatgtagca
tatcgtggcagttaa

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