Ctenopharyngodon idella (grass carp): 127509708
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Entry
127509708 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12012
tripartite motif-containing protein 35
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127509708
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127509708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_3
zf-C3HC4
U-box
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-RING_5
Prok-RING_4
zf-Nse
zf-RING_10
zf-ANAPC11
Sina_RING
Tweety
Fib_alpha
DUF4200
zf-RING-like
LpxB
FUT8_N_cat
Baculo_PEP_C
zf-RING_4
TMPIT
DUF1664
Exonuc_VII_L
zf-RING_6
End3
PIN_8
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
127509708
NCBI-ProteinID:
XP_051744588
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All DBs
Position
3:6720918..6726370
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AA seq
456 aa
AA seq
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MASQSVGQLSCPVCHEIFKDPVLLTCSHSVCKECLQRFWRTKKTQECPVCRRKSSKENLP
PNLALKNLCELLLKERKERRSSGSEELCSLHNEKLKLFCLEDNQPVCLVCFTSQTHINHT
FRPISEVVSSQKGEIKTALKSLQEKFQHNEKMKGEFEKTVQHIKSQAEHTERQIKQQFEK
LHQFLRDEEAATITALREEEGQKKQMMKEKLEEMNRHISTLSHAIKDMEEMMKDNDVCFL
KKFPVSMERVQSSQPDPQMASGALIHVSSYLGNLPFRVCKKMQDIVQNTPVILDPNSAHP
DLILSDDLTSVRYSLYQPLPDNPERFDECPGVLGSEGFNSGTHCWDVEVKESSVWRLGVT
TASNQRKGHDFYNTDVWSVFYDEDGVCESPANEFPVKKKLERVRVNLDYDRRTVSFSDPV
TNTHLHTFTTTFTETVFPFFCNSDYPSLRILPFDSQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacaatctgtaggacagctttcttgtcctgtgtgtcatgaaatattcaaggat
cccgttcttttaacatgtagtcacagtgtctgtaaagagtgtcttcaacggttctggagg
accaagaaaactcaggagtgtcctgtctgcaggaggaaatcctcaaaagaaaatcttcct
cctaatctggcattaaaaaatttgtgtgaattgctcctgaaggagagaaaagagaggcgt
tcatcaggatctgaagagctctgcagtttacacaatgagaaactcaaactcttctgtctg
gaggacaatcagcctgtgtgtttagtgtgttttacttcacagacacacatcaatcacaca
ttcagacccatcagtgaagtggtttcatcacagaagggggagatcaaaacagcactaaag
tccttacaagagaaatttcaacacaatgaaaaaatgaaaggagagtttgagaaaacagtt
caacacatcaagtctcaagctgagcacacagagcgtcagattaaacagcagtttgagaag
cttcatcagtttctcagagatgaagaagcagctacaatcactgcactgagggaggaagag
gggcagaagaagcagatgatgaaggagaagctggaggagatgaacagacacatctcaact
ctttcacacgcaatcaaagacatggaggagatgatgaaagacaatgacgtctgctttctg
aagaagtttccagtctcaatggaaagagtccagagctcacagccggatccacagatggct
tctggagctttgattcatgtatcaagttacttgggcaacctgccattcagagtctgcaag
aagatgcaggacatcgtccaaaacactcctgtgattctggatccaaactcagctcatcca
gatctcatcctgtctgatgatctgaccagtgtgagatacagcttatatcaaccgcttcct
gataatccagagagatttgatgagtgtcccggtgttctgggttcagagggttttaactca
ggaacacactgctgggatgtggaggttaaagagagttcagtctggagacttggagtaact
acggcatcaaaccagaggaagggacatgatttctataacactgatgtctggagtgtgttt
tatgatgaggatggagtgtgtgaatcgcctgcaaatgaatttcctgttaaaaagaagctt
gaacgtgtgagggtgaatctagactatgacagaagaacggtgtcattctctgatcctgta
actaacacacatctacacacattcacaaccaccttcactgaaacagtctttccattcttc
tgtaattctgattatccctctctgaggatcttaccttttgatagtcagtaa
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