KEGG   Ctenopharyngodon idella (grass carp): 127509820
Entry
127509820         CDS       T08802                                 
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04144  Endocytosis
cide04530  Tight junction
cide04810  Regulation of actin cytoskeleton
cide05100  Bacterial invasion of epithelial cells
cide05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cide00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127509820 (zgc:86896)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    127509820 (zgc:86896)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    127509820 (zgc:86896)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127509820 (zgc:86896)
   05100 Bacterial invasion of epithelial cells
    127509820 (zgc:86896)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cide04131]
    127509820 (zgc:86896)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cide04812]
    127509820 (zgc:86896)
Membrane trafficking [BR:cide04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    127509820 (zgc:86896)
Cytoskeleton proteins [BR:cide04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     127509820 (zgc:86896)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WDR55 Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_HPS5 EIF3I RMC1_N Rax2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_IFT122_1st PEP5_VPS11_N Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 127509820
NCBI-ProteinID: XP_051744784
LinkDB
Position
3:complement(32768708..32774172)
AA seq 357 aa
MSLYSFGLEPLSCHAWSKDRTQIAISPNSNEVHIYQKKEKEWIKIHELTEHSGRITGIDW
APESNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGAKLI
SVCYFEKENDWWLSKHIKKPINSTVLSLDWHPNNMLLAAGSADLNCRIFSAYIKDIEDRP
GPTPWGSKMPFGELLLEYKECGGWVHSVCFSPSGDALAWVSHNSAISVADASKGKEVTQL
TTGHLPLLSLLYVSETEIVAAGHDCCPYQFSYKGPGCLEFVKKVDIPKQSSKGNMSAMQH
FRNLDKKAITEEEDTDLGSLHQNSITQLCILEGLKAKVEKFSSVALDGAMVVWDFKH
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgtccctctatagctttggattggagcctctgtcctgtcatgcctggagcaaagaccga
acacaaattgccattagccccaacagcaatgaggtgcacatttaccaaaagaaagaaaag
gaatggattaagattcatgaactgacagagcacagtgggcgaatcacaggcattgattgg
gccccagagtccaaccgtatagtgacatgtgcctcagataggaatgcctatgtgtggaca
cttaaggatggggtttggaagccgacactggtgctggttcgcatcaatcgagctgccacg
tgtgtcaagtggtcacctcttgagaacaagtttgctcttggaagtggagccaaacttatt
tcagtgtgctactttgaaaaagaaaatgactggtggctgagtaagcatatcaagaaaccc
attaactccaccgttctgagtctagactggcatcccaacaacatgctgctggcagctggc
tctgctgatctcaactgcagaattttttctgcatatatcaaggacattgaggacaggcct
ggaccaacaccatggggatccaaaatgccctttggggagttgctcctggagtataaagag
tgcggtggctgggtgcacagtgtctgtttctctccatctggtgacgctctagcctgggtt
agccacaacagcgccatcagtgtagcagacgcctcaaagggaaaagaggtcacacagctg
acaacaggacatcttccattgctaagcctactatatgtcagtgagactgagattgtagct
gcgggccatgactgttgcccttatcagttctcatacaagggtcctggatgcttggaattt
gtgaagaaagtggatattcctaagcagagctccaaaggcaacatgtctgccatgcagcat
ttccgtaatctggacaaaaaagcgattactgaggaggaagacactgacttgggcagtctg
catcagaacagcatcacccaactatgtattctggaagggctgaaggccaaggtggagaag
ttcagcagtgtggctttagatggtgccatggttgtctgggatttcaagcactga

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