KEGG   Ctenopharyngodon idella (grass carp): 127510054
Entry
127510054         CDS       T08802                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03020  RNA polymerase
cide03420  Nucleotide excision repair
cide04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127510054
  09124 Replication and repair
   03420 Nucleotide excision repair
    127510054
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cide03021]
    127510054
   03400 DNA repair and recombination proteins [BR:cide03400]
    127510054
Transcription machinery [BR:cide03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     127510054
  RNA polymerase III system
   RNA polymerase III
     127510054
  RNA polymerase I system
   RNA polymerase I
     127510054
DNA repair and recombination proteins [BR:cide03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127510054
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 127510054
NCBI-ProteinID: XP_051745529
LinkDB
Position
3:9897280..9900141
AA seq 127 aa
MSDNEDNFDDGDFDDVEDEEPLDDLENVEDEDQENVQILPAGEGQQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGSYEDWGC
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtctgacaacgaagacaattttgatgatggagattttgatgatgttgaagatgaagag
cctctggatgatctggagaacgtggaggatgaggatcaggagaacgtccagatcctgccg
gcgggtgaaggacagcaggccaatcagaagagaatcaccactccttacatgaccaaatac
gagcgcgcgcgagtgctggggacgcgagcgctgcagatcgcgatgtgtgcgccagtgatg
gtggagctggaaggagagacggatccgctgcagatcgccatgaaagagctcaagagcagg
aagatccccatcatcatccgccggtatcttccagacggcagttatgaggactggggctgt
gacgagctcatcattactgactga

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