Ctenopharyngodon idella (grass carp): 127510112
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Entry
127510112 CDS
T08802
Name
(RefSeq) neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04330
Notch signaling pathway
cide04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127510112
04371 Apelin signaling pathway
127510112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
Ank_3
EGF_3
Ank_4
Ank_5
EGF_Teneurin
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
127510112
NCBI-ProteinID:
XP_051745543
LinkDB
All DBs
Position
3:39995095..40027786
Genome browser
AA seq
2472 aa
AA seq
DB search
MGNYSLWIFLSVLYLVQNSEGLRCVDTYRPCENGGMCIDSRCLCRPGYIGLICQHLDPCH
RSPCLNGAACKSQVANEVPQYTCVCQRGFRGQDCSLIDACATNPCANGARCTNSNNHYNC
SCPPGYQGKNCRNDIDECRKPGKCLNGGICMNTHGSFRCECLLGYSGRTCEVPTQPCAPS
QCLNGGTCHQTGDHTYECACLPGFRGHNCEENVDDCPGHKCMNGGICVDGVNTYNCQCPP
EWTGQYCAEDVNECLMQPNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENIDDCATAVCF
NGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPAGFV
GGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYTGPRCEIDINECLSMPCQNDA
TCLDRIGEFTCICMPGYQGKYCEVDVDECESNPCVNDGICRDMVNGFTCTCQPGFTGTMC
QIDIDECASTPCQNGAKCIDRPNGYECRCAEGFEGRLCESNIDNCKPDPCHHGTCIDGIA
SYTCNCDPGYTGYRCENQLNECHSNPCQNGGKCVDRVNKYICQCQHGTSGTNCEINFDDC
ASNPCDYGICKDGINRYECVCKPGFTGPQCKDEIDECQSNPCRNGGTCVDDENGFYCQCP
EGFHDPYCYSQVDECASSPCLHGTCRDDPNGYRCDCEPGWVGKNCDIDRNDCLPSPCQNA
GTCIDQLNGFTCKCRQGFRGNLCQVNINECASSPCLNQGTCVDGVASFTCLCEPPYSGPT
CAELLTPCSPNPCANHASCVHTPDYLGYQCNCQPGWQGQLCNNDINECTSNPCKNRGTCT
NTLGGYVCSCRAGYTGPNCETDINDCSPNPCLNGGSCTDGVNSFRCSCLPGFTGARCATE
VNECQSGPCKNGGTCTDYVNSYTCTCKPGFTGLFCETNIPDCTESSCFNGGTCTDGINGF
KCTCRSGFTGDYCQYEVNECDSQPCLNGGVCQDALESYRCSCPKGYTGPRCQYPVDWCRP
SNPCKNSGRCRQKDASFTCDCLGGWSGRYCDIPGVSCEVAARQRGLQTDELCHHGGHCVN
TGNTHYCKCPADYTGSYCESQFDHCEDKPCLNGATCRSYMGGFTCDCMPGYEGNNCEREV
NECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCSIPSWPRGTPKCQNNGTCV
DRVGGYRCNCPPGFTGERCEGDINECLSNPCNPSNSLDCIQLPNDYQCVCKPGFTGRGCQ
NRFSVCESQPCMNGGVCSVSGGSPLGYTCTCQLGYAGANCERNMNCKELPCYNGGSCTLT
SQGARCTCIQGFGGPLCQHRSNEGCSSKPCRNGGLCTEEISFPFFHCQCSNGWTGKRCES
KESRLLPPQPPSPLCPIAECHGKANDSVCDKECNSFACHWDGSDCSLAVNPWARCTDPRC
WRLFNNSQCDEFCNNAECLFDNFDCKNKEKVCNPIYAMYCTDHYADGLCDQGCNTEECGW
DGLDCAAKIPEDLAEDVLVIVVLLPPEELLRTQTAFLQRLSAILRTTLRFRLDQNGEYMI
RPYTSRNTRSKRELHPQQEVIGSIVYLEIDNRLCSQNSDDCFRNANGAAEYLGALSACEM
LDFPYPLKEVRSEKIEEVDVPYWGKLLIVGVASLFLLVILMVGMLIARRKREHSTLWFPE
GFFLKKETSSNKNRREPVGQDSLGMKHMPKTVEESLLADHSDQWIDTDCPEVKRLKVEEP
SILSDGEDAVDSRQWTQHHLAAADIRMPPSMALTPPQGEFDSDCMDVNVRGPDGFTPLML
ASFCGGGLEPEVTEDDDSDESSANIISDLIYQGASLAAQTDRTGETALHLAARYARADAA
KRLLDAGADANAQDNTGRTPLHAAVAADAQGVFQILIRNRATDLDSRMYDGSTALILAAR
LAVEGMVEELITCHADVNAVDEIGKSALHWAAAVNNVEATVALLKNGANKDMQDLKEETP
LFLAAREGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVRSPQG
HAGAGHHLSGSHTLSPLMCPPSNFLQGLKSTPQGKKNRRPGAKGMGGQHATSLKDSAKSR
NKRLTLDMQSALLESSVTLSPVDSLDSPRGGASNAGYVTNPTSPAAMPSPGLFHSSMSVP
STPMVHSSILDGTSPFAVSLAQLSDLGDGGLSMQGRVAMQGGGVNQGPHNYVLNAGQMSL
NMGMVSPVSVPFDWHSRMPPSSQCSQPMVNMVHPASSQAGMLPQTPTLQQSSMLMHQQQV
FRNAQQPILQPTPVSNTPSISPVKLPPIAEQQPQQLRSHALTNPNLTRMGSSTPPTPQQT
QPPPAFYQPQQPQAQPPQATAAPQASQAQAIPSQAPPAQASSSTAGPEDYPTPPSQHSYT
SAMDATPKHYLHVPSEHPYLTPSPESPEPWSSPSPHCVSDWSDSTPSPAVTAPAQTQISH
VQESSGKMQVFA
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atggggaattacagtctttggatatttctgtcagttttatatctggtgcaaaatagcgaa
ggattgcgctgcgtggatacatacaggccgtgcgaaaatggaggaatgtgtatcgattca
agatgcttatgccgacctggttatattggtttgatctgtcaacatctggacccctgtcat
cgctcaccttgtctaaacggagcagcttgcaaaagccaggttgctaatgaagtcccacag
tatacctgtgtgtgccagcgaggtttcagaggtcaggattgttccctgattgatgcatgt
gccacaaatccctgtgccaatggtgcccgttgtactaattcgaataatcactacaactgc
tcgtgcccacctgggtatcagggaaaaaactgtcgcaatgacatcgatgagtgccgcaaa
cccggaaaatgccttaacggtggcatctgcatgaacacgcatggctcattccgttgcgag
tgccttctagggtacagcgggcgcacatgtgaggtgcccacccagccctgcgccccttca
cagtgtctcaacgggggcacctgccatcagaccggtgaccacacctacgaatgtgcttgc
ttaccaggcttcaggggacacaactgcgaggagaacgtggatgactgccctggacacaag
tgcatgaatggtgggatctgtgtagatggtgtcaatacatacaactgtcagtgtccgcct
gagtggacaggccagtattgtgctgaggatgtcaacgagtgtctcatgcagcccaatgct
tgtcacaatggtggtacatgcttcaacaccattggaggacatacctgtgtatgtgtcaat
ggctggacgggggacgactgcagtgagaacattgacgactgtgccactgctgtctgcttc
aacggtgccacgtgtcatgaccgcgtggcctcctttttctgcgagtgcccggtgggcaaa
actggtctgctctgtcatctggatgatgcttgtgtcagtaacccctgtaatgagggggcc
gtgtgtgacactaaccctctgaacggccgcgccatctgcacctgccctgctggctttgtt
ggtggagcttgcaaccaagacatggatgaatgttctattggtgccaacccctgcgagcat
tttgggaagtgtgtaaacacagagggttcgttccagtgccagtgtggacggggctacacc
ggccctcgctgtgagattgatatcaatgagtgtctgtccatgccctgccagaacgacgcc
acctgcctggaccgtatcggcgagttcacatgcatctgtatgcctggctatcaggggaag
tactgcgaggtggacgttgatgaatgcgagagcaacccctgtgtaaacgacggcatctgc
agagacatggttaatggcttcacctgcacctgtcagccagggtttactggcaccatgtgt
cagatcgacattgatgagtgtgccagcactccctgccaaaatggagccaagtgcattgac
cggcccaatggctatgaatgccgctgtgctgaagggtttgagggaaggctgtgtgagagc
aacatcgataactgcaagcctgacccgtgccaccatggcacttgcatagatggcattgcc
agttacacttgtaactgtgatcctggctacactggctaccgctgcgagaaccagctcaac
gagtgccacagcaacccctgccagaatggcggcaaatgtgtggaccgagtcaacaagtat
atctgccagtgtcaacatggcacctcaggtaccaactgtgaaatcaactttgacgactgt
gctagcaacccttgtgactacggaatctgcaaagatggcataaaccgctatgaatgtgtc
tgcaaacctggctttaccggacctcaatgtaaagatgagattgatgagtgccagtcgaac
ccctgtcgcaatggagggacctgcgtagatgatgagaatggcttctactgccagtgccct
gaaggcttccacgacccatactgctattcacaagtggatgagtgtgccagcagcccatgt
ttgcacgggacctgcagggatgaccctaatggctatcggtgtgactgcgagcctggatgg
gtgggtaagaactgtgacatagaccgaaacgattgtttacccagcccctgtcagaatgca
ggcacctgtatcgaccagctcaatggtttcacctgcaagtgtcggcagggttttagaggt
aacttatgtcaggtgaacatcaacgagtgtgcctccagcccgtgtctaaatcaaggcacc
tgtgtggatggagtcgccagtttcacctgtctctgtgagccaccttatagtggtcccacc
tgtgcagaactgctcacaccttgctctcccaacccctgtgccaaccacgcttcttgtgtg
cacacgcctgactacctgggctaccagtgtaactgccaacctgggtggcagggtcagttg
tgtaacaatgacataaatgaatgcacctctaacccatgtaagaaccgcgggacctgtacg
aatactttgggtggctacgtgtgctcctgccgtgctggctacactggtcccaactgtgaa
actgatatcaacgattgttcaccaaacccctgtctgaatggaggatcctgtacagatgga
gtgaactcattccgttgcagctgtctgcctggcttcacaggggctcgctgtgctaccgag
gtgaacgagtgtcaaagcggtccttgcaagaacggaggcacttgcaccgactatgtcaac
agctacacatgtacctgcaaaccaggtttcacaggccttttttgtgagaccaacataccc
gactgcactgaaagctcctgttttaatggaggcacctgcactgatgggatcaatggcttc
aaatgcacctgccgctcaggattcactggagattactgccagtacgaggtgaacgagtgt
gactctcaaccgtgccttaatggaggagtttgtcaagatgccctggagtcatatcgctgc
tcatgtccgaaaggttacactggcccccgttgccagtatccagttgattggtgcaggcct
tctaatccatgcaagaatagtggccgctgcagacagaaagatgcctccttcacatgtgac
tgtttgggtggctggtcaggtcgttattgtgacatcccaggagtgtcctgtgaagttgca
gccagacagagaggtctccagacagatgagctttgccaccatggtggacactgtgttaat
actggtaacacacactactgcaaatgtcccgcagactacacaggcagttactgtgagtcc
cagtttgaccactgtgaggacaaaccttgcctcaatggcgccacctgcaggagctacatg
ggaggattcacctgtgattgtatgcctggttatgaggggaacaactgtgagagagaggtc
aatgagtgtcaatctcatccatgtcagaatggaggaacctgcattgacctggtgggacat
tacatctgctcctgccctccaggaacactgggggtcctttgtgagataaatgaggatgac
tgctcaattccctcatggccccgggggacacccaagtgtcaaaataacggcacatgtgtg
gacagggttggagggtacaggtgtaactgccctccaggcttcactggagaacgctgtgag
ggagacatcaacgagtgcctttccaatccctgcaacccctccaacagcttagattgcata
cagttgcccaatgattaccagtgtgtgtgcaagccaggcttcacaggacgagggtgtcag
aatagattcagtgtgtgcgagtctcagccctgtatgaatggaggagtatgctctgtgtcc
ggcggctcaccactgggatacacttgcacctgtcagcttgggtatgcaggtgccaactgt
gagaggaacatgaactgcaaagagctgccttgctacaatggtggcagctgtactctcacc
tcacaaggtgcacgttgcacctgtattcagggctttggcgggccgctgtgtcagcaccgc
agcaatgagggctgctcctccaagccctgccgcaatggaggcttgtgtacagaggaaatt
agcttcccttttttccactgccagtgcagcaacggctggacaggcaaacgatgcgaatcc
aaggaatccaggcttctgccgccgcaacctccttctcctctatgccctattgctgaatgt
cacggcaaggccaatgacagtgtgtgtgacaaagaatgtaattcgttcgcctgccactgg
gatggaagtgactgctctttggctgtgaacccctgggcacgctgcacagaccctcgctgc
tggcggctcttcaacaacagccagtgtgatgagttctgcaacaatgcagagtgcctgttc
gataactttgactgcaagaacaaagagaaagtctgcaaccccatttatgcgatgtactgt
accgaccattacgcagatgggctctgtgatcaaggctgcaatactgaagagtgtggctgg
gatggactggattgtgcagcaaagattccagaagatcttgcggaagatgtgctggttatt
gtagttctgctgcctccagaggagctgctaaggacacaaactgctttcctacagagacta
agtgcaatcctccgtaccacattgcgcttccgccttgatcagaatggagaatacatgatc
cgaccctatacaagccgtaatacacgcagtaaacgagagcttcatcctcagcaggaggtc
attggatccatcgtatacttggagatagacaacaggctatgctcccagaactcagatgac
tgcttccgcaatgctaacggtgctgctgaatacctgggtgctctgtctgcttgtgaaatg
ttggatttcccatacccccttaaagaagtgcgcagtgaaaaaattgaagaggttgatgtt
ccctactggggtaagctactaatagtaggggtagcttctctattcttgttggtaatcttg
atggtgggcatgttgattgcccgccgcaaacgtgagcacagcacactctggttccctgag
ggcttcttccttaagaaggaaacgagcagtaacaagaaccgcagagaacctgtgggccaa
gactccctgggcatgaaacacatgccaaagacagtggaagagtctctattggctgatcac
agtgaccagtggatagacacagactgcccagaggttaaaagacttaaggtggaagagccc
agcattctgtcagatggtgaggatgcagttgacagcagacagtggacacagcatcacttg
gcagcagcagatatccgtatgccaccttccatggctctgacacctcctcagggagagttt
gacagcgactgcatggacgtcaatgtccgaggccctgatggcttcacacccctgatgctg
gcatccttctgtggaggtgggctggagccagaagtgactgaagatgatgactccgatgaa
tcctcagccaacatcatatctgacctcatttaccaaggagcatcgctcgcagctcagaca
gaccgcactggagagaccgctctgcacctggctgcacgctacgcccgagctgacgcagct
aaaagactcttggatgctggggctgatgcaaatgcacaggataacacaggccgcacacct
ctgcatgcagctgtagcagctgatgcacagggggttttccagattctaatcaggaaccgc
gccacagacctagactcgcgcatgtatgatggctccactgctctgatccttgcagcccgt
ctggcagtagagggcatggtggaagagttgatcacctgccatgctgatgtcaatgctgtt
gatgaaatcggaaagtcagctttgcactgggcagctgcagtcaataatgttgaagctaca
gttgccttgttgaagaacggtgccaataaagatatgcaggacctcaaggaggagactcca
ctattcttggctgccagggaaggtagttgtgaagcagtgaaggtgttgttggctcacttc
gccaacagggagataacggatcacatggacaggctccctcgagatattgcccaggagcgc
atgcaccatgacatcgttcagctgctcgatgaatataacactgtgagaagtccgcagggc
catgcaggggcaggtcaccacttgtctggtagccatacgctctcaccactcatgtgtcct
cccagcaacttcctacaagggctgaaaagcaccccgcagggtaagaagaaccgtcgccca
ggggctaaaggcatgggtgggcagcatgctaccagcctgaaagattccgccaaaagccgc
aacaaacggctgacgctagacatgcagagtgctttgctggagagctctgtcacgctttcc
cccgtcgactcgttggattcgccacgcggaggcgccagcaatgctggctacgtcaccaat
ccaacctcaccggccgccatgccctctcctggccttttccactcctccatgtctgtccct
tccactcccatggtgcacagcagtatcctggatggcaccagcccttttgcggtttcccta
gcacagctgagtgacctgggtgacgggggactctcgatgcaggggcgtgtggccatgcaa
ggaggcggtgtcaaccaaggcccccacaactacgtgctgaatgccggccagatgagcctc
aacatgggcatggtaagtccagtaagcgtgccgtttgactggcacagccgcatgcctcca
tcttctcagtgcagtcagcccatggtcaacatggtgcatccagcaagtagccaagcaggc
atgctccctcagacaccaaccctgcagcaaagcagcatgctcatgcaccagcagcaggtt
ttccgtaatgcccagcaacccatcctgcagccaacacccgtctccaacacgccctctatt
agcccggtcaaactgccgcctattgcagagcagcagccgcagcaacttcgcagccacgcc
cttaccaaccccaacctcacccgcatgggctcctccactcccccaacaccacagcagaca
cagcctcctccagctttctaccagccacagcagccgcaggctcagcctccacaggccaca
gcagcccctcaggcctcgcaagcacaggctatcccgtctcaggcacccccggcacaggcg
agcagcagcaccgcaggcccggaggattaccccactccgccctcccagcacagctacacc
tctgccatggatgcaacacccaagcattacttgcatgtgcccagtgaacatccttacctg
accccttctccagagtctccagaaccctggtctagcccctcccctcactgtgtatctgat
tggtctgactccacccccagcccggccgtcacggctcctgctcaaacccagatttcccat
gtccaggaatccagtgggaagatgcaggtgtttgcttga
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integrated database retrieval system
