Ctenopharyngodon idella (grass carp): 127510383
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Entry
127510383 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: epiphycan
KO
K08127
epiphycan
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cide00535
]
127510383
Proteoglycans [BR:
cide00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
127510383
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Paralog
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Motif
Pfam:
LRR_8
LRR_4
Collagen
LRR_5
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
127510383
NCBI-ProteinID:
XP_051745810
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Position
4
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AA seq
661 aa
AA seq
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MVTLRLMWGLLVLCVVAASPPRYARQAELDNYDNNNVDLDRNVDVDDVYDYYDAIDEPQI
EIGTLGPDEDIDPSHVASLEEEEEEENELPIKPQLIPSGSGESGTLMGPSAQGEEELRLT
PIDILQISGDISGSGDLGSGASGSGASGDLLDEKASGSGEPLGSGGSGASGDISGSVDSG
DLGSGVSGLSGSGIILISGGEEELHLMFETLPHEASGDFGESGISWVSGASGLPEVSGEP
AASGLFGLSGEPVASGVPEASGEPLVSGVPDMSGESGASGVSGVSGEPGVFGVPEVSGES
GVPEVSGMPGASGVPEMSGESGLSGVPEVFGESGTSGMPVVFGESGISGVPEESGESGIS
EVPEVFKKPETSKGFEESSVPEETGEPVDSLESGESGVTEAPDVTTDLLIPDLDEEEEIL
LTTPTTPLEGTGGDIGSGLPDIDTDIDTDTTGMATCMLCTCLVGSVYCDDLKLERVPPLS
KETTHFYARYNKIARISKSDFANLSIXIKEIDLTSNGISRIDDDAFFGLPALEELILREN
SIRQLPALPPSMTLIDACHNQLGNTGIQSEAFKDMPGLLYLYLTDNNIDHIPVPLPDSLR
SLHLQNNNIQMMHEDTFCNPHDLNYIRNALEDVRLDGNPINLSRTPQAYICLPRIPIGAL
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgctgaggttgatgtggggactcctggtcctgtgtgtggtggcagcctctccc
cccagatacgcccgacaagcagaactagacaactatgacaacaacaacgtggatttagac
cgaaatgtggatgtcgacgatgtctatgactattatgatgcaattgatgaaccacagata
gagattggcaccttgggccctgatgaggacattgatccttcacatgttgcctcattggag
gaggaagaagaggaggagaatgaattgcccataaagcctcagcttattccgtcaggctct
ggggagtcagggactctgatgggccctagtgctcagggagaggaggagcttcgtctgacg
cccattgacatccttcagatttccggggacatttccggttctggtgacttgggctctgga
gcctcgggctctggagcctctggagacttgctcgatgaaaaagcttccggttctggagag
cctttgggctctggaggttctggggcctctggtgacatttcaggatctgtggactcagga
gaccttggttctggagtctctgggctttctggttcaggcataatattgatctcaggtgga
gaggaggagctccacctgatgtttgaaacccttccacacgaggcctctggggattttggg
gagtctggaatctcttgggtgtctggagcctctgggttacctgaggtgtcaggggagcct
gcagcctctgggctatttgggttatctggagagcctgtggcctctggggtacctgaggca
tcaggagagcctttggtctctggagtacctgatatgtcaggagaatctggggcctctggg
gtatctggggtctcaggagaacctggggtctttggggtacctgaggtgtcaggagagtct
ggggtacctgaggtatcaggaatgcctggggcctctggggtacctgagatgtcaggagag
tctgggctctctggggtacctgaggtattcggagagtctgggacttctgggatgcctgtg
gtgtttggtgagtctggcatctctggggtgcctgaagagtctggagagtctgggatctct
gaggtgcctgaggtctttaaaaagcctgagacctctaaagggtttgaagagtctagcgta
cctgaggagactggagagcccgtggactctttggagtcaggagagtctggggtgactgag
gcgccagacgtcaccactgacctattaattcctgacctagatgaagaggaggagatactc
ctaactaccccgaccactcccctggaggggactgggggtgatatagggtcagggctacct
gatattgacacagatattgacacagatacaacaggtatggctacctgtatgctgtgcacc
tgtctggtcggatctgtgtactgtgatgaccttaagctggagcgtgttcctcccctctcc
aaagaaaccactcatttctatgcccgctacaataaaatcgccaggatcagcaagtctgac
tttgccaacttgagtatataaattaaagagatagatctgactagcaacggcatttccagg
attgatgatgatgctttctttggccttcctgctctggaagagttgatattacgagagaac
agtattagacaacttcctgctctgccaccctctatgactcttattgatgcctgtcacaac
cagttgggtaacactggcatccagagtgaagctttcaaggacatgccagggctactttac
ctttacttgactgacaacaacatagaccacatcccagttcccttgcctgacagtctgcgc
tccctgcacctacagaataacaatatccagatgatgcatgaggacaccttctgcaatccg
catgacttaaattacattcgcaatgctctggaggacgttcgcctggacggtaatcccatc
aacctcagcagaaccccacaggcctacatatgtttgccacgtatccccatcggtgccctt
atttaa
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