Ctenopharyngodon idella (grass carp): 127510430
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Entry
127510430 CDS
T08802
Name
(RefSeq) tubby-related protein 4a isoform X1
KO
K24720
tubby-related protein 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127510430
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Other domain-containing proteins
Tubby family proteins
127510430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Prp19
WDR55
UvrD_C
Motif
Other DBs
NCBI-GeneID:
127510430
NCBI-ProteinID:
XP_051745897
LinkDB
All DBs
Position
4:complement(16944534..16961944)
Genome browser
AA seq
1743 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPRSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRTTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHEAEGIASMAWNYPSFLVEDSSESDTDSDDYTPL
HVHSLKPVLTVCFTSGDISLMSNYDDLSPTLIRTGLKDVVVQWCSQGDLLAVAGMERLVM
TSDLSQVTRNAIVKFYNVHGENIYSLETPAQRPISTLCWGHRDSRLFLACGPALYVLRVE
HRVASLQLLCQQVIASAVHEEKDVAKLSMPSRLSTYVSSAFAPTVKPPIPDPNNMRDFVS
YPTSGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDPKT
DGKTDEVYGNNFIPSMIDSCNCSDSSDIELNDDWVGKKSPKISRGSKSPKLPRDLVCPFT
NRINIDPRKSPKLSRTTQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQVTSN
IWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISVEYINLPMFSPNV
FSEDEDDLPVTGASGITDDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVQLD
VLSNPTSTVAPPGVSVSDQGQQDTVLTAQYTVPARYSSPGQVIFGGMDVGRLLVVQSQQQ
QQQSQQQQQQQQQQQQLQQHYQQQQLQQQLQQYQLQQQQLLQHQHMQQQQQQHMQQQIQQ
MQQQQQMQQQLQHQIQQQHLQMQLQLQHQQMQQQLQQQHQIQIPVPTLPSGQPSCPVIQL
PQSTIPVAPPTAEHSTERGEHELLLKIKTTRSAPQLAEGDAVVFTAPLEISKMNPPPPYP
GTVAAAVAAATAAGSAAASTSSASGVAGSNTSTPSSGEVCLKKGDLTLYPPGAQATQYPT
PLGYERITTFDSSGNVEEVCRPRMRLVCNQNVYTLQGPGSSATLRVSSSSSAVEGKKVQL
PYASATLNRLTVPRYSIPSGDPPPYPDTANAVGAGRNPGQRLDSSLIHATLRRNSREAAL
KVSQMLDPQRTLPSKAKANTLSASYQPRGPTALYTCSQCSSNGGISSGATSSGSNGIAGG
TIIRQDFPPTGGGAPHSTVIVHSNSASPLPSQSSYNLLSMDGSSGGGNRDRADYINSAFT
EDEALNQSLRQMALNTEVVSLTVKRPPPYQWDPSSTEEIWVPQERTATLPTSGPPTSHKP
PPLVLSPAQHLDVSRLPFVLSPKSPTSPNVTTFQPPGAYQIALPYPPSAAYSGPSLQNVQ
ASPRPPSPKEVVPPLSFSQQDQAVVLPPGYPPNLPNLACFPPMYPGTASCSSLPVTPIPL
HPWGSYNPCPPMPSPPGPAPSLPPKTSHMLDKPVLSPPPQPPPLPSPPPDLQSVVSPPEA
IAEAGEGFQEVLSLNESPVPQRADRFGKKNRKRLDNSRTDEANVPAIAEGGNKSKKEGRA
LGDFNSLISSPRLGGRDKKKPKGQKEQLKAKKLSKATTNEFQDSSESEPELFISGDELMN
QSQSGKKSWKGKRNLRAGGCELDEIKCRKANEKEDRGLGSQGFVYIMANKQPLWNEATQV
YQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQ
RLK
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggcagtggagcacggtcctgtcctgtgcagcgactccaacatcctgtgcctg
tcctggaagggtcgcgtgccccggagcgagaaggagaagcccgtgtgcaggaggcgctac
tatgaggaaggctggctggccacggggaacggcaggggcgtcgtaggcgtgacgttcacc
tccagccactgcaggagagaccgaaccaccccacagcgcatcaacttcaacctgagggga
cacaacagtgaggttgtgttggtgagatggaacgaaccctttcagaagctggcgacctgt
gacacagacggcgggatctttgtttggatccagtatgagggccgctggtctgtagagctg
gtcaatgacagaggagctcaggtgagcgacttcacgtggtcacatgacggcacgcaggct
ctgatctcctaccgcgatggttttgtgctggtggggtcggtgagcggtcagcgccactgg
tcctctgaaatcaacctggagagtcagatcacctgtgggatttggacccctgatgaccag
caggtgttgtttggcacggcggacgggcaggtgatcgtcatggactgtcacgggcggatg
ttggctcatatcttgctccatgaggccgagggcatcgccagtatggcgtggaattatccc
agctttctcgtggaggacagcagcgagagcgacacggactcggatgattacacgcctctg
catgtgcacagtctgaagccggtgttgacggtctgcttcacgtctggagacatcagtttg
atgagcaactatgatgacctctcacctacgttaatacgcactggcctcaaagatgtggtc
gtgcagtggtgctctcagggcgacttgctggctgttgctgggatggagagacttgtaatg
acctctgatctttcccaagtgacccgaaatgccattgtaaagttttacaatgttcatggt
gaaaacatttactcactggaaacacctgctcagaggccgatcagtactctgtgttggggc
catcgagactcgcgtctgtttcttgcttgtggcccggcgctgtacgtgcttcgtgtcgaa
cacagagtcgccagcctgcagctgctctgccaacaggtcattgccagtgcggttcatgag
gagaaagacgtggccaagctcagcatgccctctcgcctaagcacatacgtgtcttctgcc
tttgctcccaccgttaagcctccgatcccagatcccaacaacatgcgagactttgttagt
tatccgacatcaggaaatgaacgtttgcactgcaccatgaagcgcaccgaggacaaccct
gaggtcggcggtccatgctacaccttgtatctagagtatctaggggggcttgttcctatt
ctaaaaggccgtaggattagcaaacttcgccctgaatttgtcatcatggacccaaagact
gatgggaaaacagatgaagtctacggcaacaacttcatcccctccatgattgacagctgc
aattgctcagattctagtgacattgagctcaatgatgattgggttggaaagaaatcacca
aagatctccagagggagcaagtctcccaaacttcccagagacttagtgtgtccctttacc
aacaggataaatatagacccccgtaaatccccaaagctctcccgcaccacacaggaaata
tcccgatcgccacggttgcccattcgcaagccctccattggctctccaagtctgactcgg
cgagagtttcccctagatgacatcacacagcacaattatctcgcgcaagttacgtctaac
atatggggaacaaagttcaaaattgtggggcttgcagcatttttgccaacaaatcttggt
gcagttatctacaagacgagtctgcttcacctccagcccagacagatgaccatctacctc
cctgaggtgaggaagatctcagtggaatacattaacctacctatgtttagtcctaatgtc
ttcagtgaggatgaggatgacctgcctgtcacaggagcatcaggaatcactgatgataat
ccaccttgcactgtcaacatacctatcgcccccatacatagccctgcccaagccatgtcc
ccaacccaaagcattggcctagtccagtctctactagccaatcaaaacgtccagttggat
gtattgtccaatccaacatcgactgtggcaccacctggggtgtctgtgtctgaccaagga
cagcaggacactgtgctcacggcacagtatactgttcctgccaggtattctagtcctggc
caggttatctttggaggtatggacgttggtcggcttttagttgtgcaatcccaacagcag
cagcagcaatcacagcagcaacaacagcagcaacaacaacaacaacagctgcaacaacat
tatcaacaacagcagctgcagcaacagcttcaacaatatcagctgcagcagcaacagttg
ctgcagcatcagcacatgcagcaacagcagcagcaacacatgcaacagcagatccaacag
atgcagcaacaacagcaaatgcagcaacagcttcagcatcaaatccaacagcagcatctg
caaatgcaactgcagctgcagcaccagcaaatgcagcagcagttgcaacagcagcatcag
atccaaatccctgtcccaactttgccctcaggtcaaccgtcatgcccagtgattcagctt
ccgcagagtacaataccagtcgctccccctacagcagagcacagtacagagcggggggag
catgaactcctgcttaaaataaaaactactcgttctgccccacaactggctgagggtgat
gcagtggtttttactgcccctcttgagattagcaaaatgaacccgccccctccttaccct
ggcacagttgctgctgcagtggcagctgcaacagctgcaggttcggccgctgcttctacg
agttccgcctctggggtagcgggaagcaacactagcactccatcctcaggggaagtttgt
ctaaagaaaggggatttgactctgtatccacctggtgcgcaggcaactcagtacccaacc
ccactgggctacgaacgcatcaccacatttgacagcagtggaaatgtggaggaggtgtgc
cgtccccgcatgcgacttgtttgcaaccagaatgtttacacgctgcagggcccaggaagc
tctgccaccctcagggtctcatcatcttcctctgctgtagaggggaagaaggtgcagctg
ccctatgcctcagccacgttgaaccgtctcactgtgcccagatactctataccaagcggg
gacccaccaccttaccctgacacagccaatgcggttggagcagggcggaaccctggccag
agactggacagcagcttgattcatgcaaccttgaggcggaacagtcgggaagctgcgctg
aaggtttctcagatgctggatccccagaggacacttccctccaaggccaaagccaatact
ttgtctgcttcataccagccgagaggaccgacagctctttatacttgcagtcagtgcagt
agtaatggtggtatcagcagtggggctaccagcagtggaagtaatggaatagctgggggg
acgatcattaggcaagatttcccaccaactgggggtggtgcacctcacagcactgtcata
gtgcactccaacagtgcctcgcctctgccttcccaatcctcctacaatttgctcagtatg
gatggctccagtggtggcggaaacagagacagggctgactatatcaactctgcctttaca
gaggatgaggcattgaatcagtctctgaggcaaatggctcttaatacggaggtagtgagt
ttgacagtcaaacggccacctccgtatcaatgggatccatcttctacggaagagatttgg
gttcctcaagagcgtacagcgactctgcccacctctggtcctcctacatcccacaaacct
cccccactcgtgcttagccctgcacagcatctggatgtttcccgtcttccgtttgtcctc
tcgcctaagtctccaacaagtcctaatgtcacaactttccaaccaccaggagcttatcag
attgcactgccctatccaccaagtgcagcctacagtggtccctctctacagaatgtgcaa
gcttctccacgtcctccctctccaaaagaggtggttcctccactttccttttcccagcaa
gaccaggctgtggtcttgccacctggttatccgccaaatttgcccaaccttgcttgcttc
ccaccaatgtaccctgggacagcttcttgttctagtctgcctgtgactcccattcctctt
catccatggggttcttacaacccctgtccacccatgccaagccccccaggtcctgcccct
tcccttccaccaaagacctcccacatgctggataagcctgttctttctcctccccctcaa
ccaccccctcttccttcgccgcctccagacctccagagtgtggtcagtcccccagaagct
atcgctgaagctggggaaggctttcaagaggtgctctcactgaacgaaagcccggttccc
caaagagcagacaggtttggcaagaagaaccgaaagcggttggacaacagtcggacagat
gaagccaatgttccagcaatcgcagagggaggaaacaagtccaaaaaagagggccgtgcc
cttggtgacttcaactccctcatctccagtccaaggttaggtggacgagacaagaagaaa
cctaaaggccagaaagagcagctgaaagccaaaaagctaagcaaggccaccacgaatgag
ttccaggacagctcagagagtgagccagagctcttcatcagcggtgatgagctaatgaac
cagagccagagtggtaaaaagagttggaaaggtaaaaggaacttgcgggcaggaggctgc
gagctggacgaaatcaaatgccgaaaggctaatgagaaagaggaccgtggcctcggcagc
caggggttcgtctacattatggccaacaaacagcctctttggaatgaagccacgcaggtc
taccaactggactttggagggagagtcacgcaggaatcggcaaagaacttccagattgag
cttgaggggagacaggtgatgcagttcggaaggatcgatgggaatgcatacatccttgac
tttcaataccccttctcagctgtgcaagcttttgctgtagcacttgctaatgtcacccag
cgcctcaagtga
DBGET
integrated database retrieval system
