Ctenopharyngodon idella (grass carp): 127510572
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Entry
127510572 CDS
T08802
Name
(RefSeq) phospholipid-transporting ATPase ABCA1a isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide02010
ABC transporters
cide04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127510572
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127510572
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127510572
Transporters [BR:
cide02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127510572
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
Motif
Other DBs
NCBI-GeneID:
127510572
NCBI-ProteinID:
XP_051746133
LinkDB
All DBs
Position
1:complement(40621016..40657931)
Genome browser
AA seq
2268 aa
AA seq
DB search
MAFSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRLYYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFIDAKKILLYSQHDK
SFEGFKGLVRALRKLQRKTEGFKLKDFLHDNETLSEFLEKNATLPKHAVRQIVEANVNLE
KVLIKGFGVHLRDLCNSTSLEEFVTIADKDVSQLTQNIICQSPAEWLNNAESHFLSNLDF
LKPIRKDVKSDPKIIQDVSIATDSLLESLGALAVELVSMKSWRDMRNEILYLTGNSTQSP
NHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNYGNDNDSEPVSAYDNSSTPYC
NNVMKGLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQEFGVLRDLGGM
WEEMRPKLWNFMENSEEMDLVRTLLQNNASARFFNAKLNGTDWRVEDVSSFLSKASEDTR
PHGMAYTWREAFNEMDQAIQTISQFMECVNLDKLEPVANEERLVNKSMRLLDDRKFWAGI
VFPDMQSNTSDLPPNINYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDVFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPG
VVYLFLASFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
VVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPMQEDSYNLTTSISLMLFDSVLYA
IMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWVTAAPTNKKENAEAVCIEEEPAHL
DPGVYIENLVKVYNNGKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIQGKDIRTDLNAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVQSEMEQIV
MDLGLPHKRKSRTNQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRPGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKDFDL
SASSCRTSSSTVSYSKGSLKKEDSVSESSSDAGLGSDHESETTTIDVSLISNVIFKHVPT
ARLVEDMGHEIMYVLPYESAKAGQFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DSGVDAVVSDGTLPARRNRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLGGADG
KGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGK
YPSLALEPSMYEEQFSFFSNDAPEDRHTNGLLEALMDSPAYNEHCTDQQNDVSKSCPVKD
GEWVVPEIPETVQDIFLKGNWSMENPSPLCECSCDGRKKMLPECPPGAGGLPPPQIKVTA
AETLQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQALPAGDEVAD
AIAHIRKSFSLQTGTAADRFLGSLSTFIQGLDTKNNVKIWFNNKGWHSIGAFLSVMNNAV
LRANLPPGQERSKFGIKAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFV
VFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFLCFQQEAYVSST
NLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGS
NEIGGINNILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNL
FAMAIEGVIFFCITVLIQYRFCIKARPVSTKLKPIGEEDEDVARERQRILGGGGHTDILE
LKQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYLA
GKSVLTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVADWGIRKLG
LMKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKE
GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGADPQLE
PVMEFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSILSKNKEQLHIEDYSVTQTTL
DQVFVNFAKDQTDEDHLKDISSQKNDAVVDISQLNAFIIDQKAKESVV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggctttctccactcagttggggttactgttgtggaagaacttcacttaccgacggaga
cagactattcagctgctgattgagataatatggccgctcttcatctttttcatcttgata
tctgtccgactctattatcctccctatgagcaacatgaatgccactttcccaataaggcc
atgccctctgcggggactttaccatgggtgcagggcatcatctgcaatgcaaacaaccct
tgctttcgctaccccacccctggagagacgcccggagtggtgggcaacttcaatgactcc
ataatctcccgactgtttatcgatgccaagaaaattctcctctacagccaacacgacaag
agctttgaaggtttcaaaggactcgtacgggccttgagaaaactgcagaggaaaactgaa
ggtttcaaactgaaagacttcctccatgataatgaaacgttgtctgagtttctcgagaaa
aatgctaccctgcccaagcatgctgtgagacagatagtggaggctaacgtcaacttggag
aaggtgcttattaaagggttcggagttcatcttagagacctgtgcaattccacgtctctg
gaggaattcgtgaccattgccgataaggacgtgtctcagctgacgcaaaacatcatctgt
caatcacctgctgaatggctgaacaacgcagagagccacttcctgtccaacttggacttc
ctgaagccaatacggaaagatgtcaagtccgatccaaagattatccaggatgtgtccata
gcaacagacagcctgctggagagtttgggagcattagcggtggagcttgtgagtatgaag
agctggcgggacatgcgcaacgagatcctgtatctgacgggcaacagcacacagtccccc
aaccacatgtaccaggccgtatcccgcatcgtctgcggccacccggagggcggaggcctg
aagatcaagtcccttaactggtatgaggataacaactacaaggctctgttcggcaactac
ggcaacgacaatgacagcgagcccgtttctgcttacgacaactcctctacgccctactgc
aacaacgtgatgaagggcctggagtcgagtcccatatcgcgcatgatttggagggctctg
aagccgctgctcatgggaaagatcttgtacaccccagacactcctgccacccagaggatc
atacacgaggtcaataagacgtttcaagagttcggcgtgctcagggaccttgggggcatg
tgggaagaaatgagaccgaaactctggaattttatggagaacagtgaggagatggaccta
gtgcggactctcctccagaacaacgctagcgctcgcttctttaatgccaagctgaacggg
acagactggcgcgtggaggatgtgtccagcttcttgtccaaggcttcagaagacacacgt
cctcatgggatggcgtacacgtggagagaggcgttcaacgagatggatcaagccatccaa
accatctctcagttcatggagtgtgtgaacttggataagttggagccggtggctaacgag
gaacgtttggtaaacaagtccatgcgtctgctggacgatcgcaagttctgggctggaata
gtgtttcctgacatgcagtccaacacgtctgatctgccgcccaacatcaactacaagata
cgcatggacattgataatgtggagcgcactaacaagatcaaggatggatattgggatccc
ggtcctcgagcggacccgtttgaggatctgcggtacatctggggcggcttctcctacctg
caggatgtgattgaacacggaatcatacgagctctgacgggcagcaaggagaaaactgga
gtttacatccagcagatgccttatccctgctatgtggacgatgttttcctgcgggtaatg
agccgctccatgcctctgttcatgactctggcctggatgtactcggtggccatcatcatc
aagggtgtggtgtacgagaaggaagcacggctcaaggagaccatgaggattatgggtttg
gataatggcatcttgtggctgagctggttcatcagtagtctcataccactgctcatcagc
gctgccctactggtgctcatcctgaagatgggtaatctcctgccgtacagcgaccctgga
gtagtctatttgttcctggcctcctttgccgtagtgaccatcatgcagtgtttcttgatc
agcacgcttttctcccgcgctaacctcgccgcggcctgtgggggcatcatatacttcacc
ctctaccttccctatgtgctctgcgtggcctggcaggattacgtgggctttggtgccaaa
gtagtagtgagcctcttgtctccagtggcgttcggctttggctgcgagtactttgctctg
ttcgaggagcagggtgtgggcatacagtggagtaacctgctctccagcccaatgcaggag
gacagctacaatctcaccacttccatctcactcatgctcttcgactctgtgctgtatgcc
atcatgacctggtacattgaagctgtgtttccaggccaatatggcatcccacgtccctgg
tacttcccgttcaccaagtcctactggtgtggagagaaatgtggttgggttacagcagcg
ccgaccaacaagaaagaaaatgctgaagctgtatgcattgaagaggaaccagcccacctg
gatccaggtgtttacatcgagaacctggtgaaggtctacaacaacggcaaactggcagtg
gatggtttgactctaggtttttatgagggtcagatcacctccttcctgggtcacaatggc
gctggaaaaaccacaaccatgtctatcctcactggcctgttcccacccacctcaggcact
gcttacatccaaggcaaagacatccgcaccgatctgaacgctatacgtcaaaacttgggc
gtgtgtccacagcataacgtcctctttagcatgctcaccgtggaggaacacatctggttt
tatgcacgtctgaagggtttgcctgaggagaaggtgcagtcggagatggagcagattgtg
atggacctcggcctgcctcataaacgcaaatctcgcaccaaccagctctcgggaggaatg
cagaggaagttatcagtagcgctggcgtttgttggagggtcaaaggttgtgatcctggat
gaaccgactgctggagttgatccttacgctcgccgtggcatctgggatctgctgctgaag
tatcgtccaggtcgcacgatcatcctgtccacccaccacatggacgaagctgatatcctg
ggggatcgtattgccatcatctcccatgggaagctgtgctgtgtgggttcctctctgttc
ctcaagacccagctgggaacgggatactacctgacgctggtgaagaaagactttgatctc
tctgcaagttcctgccgcacttccagcagcaccgtctcctattctaaaggaagtctcaag
aaggaggacagtgtatctgagagtagctctgatgctgggctgggcagcgaccatgaaagc
gaaaccaccaccatagatgtctccctgatctccaatgtgattttcaagcacgtccctaca
gccagactagttgaagatatgggtcatgagatcatgtacgttctgccttacgaatctgcc
aaagccgggcaattcgtggagctcttccatgagattgacgaccggctcactgacctcggc
atttccagctatggcatctctgacaccacactggaagagattttcctcaaagtggcagaa
gacagtggtgttgatgctgtagtgtcagatggaactctacctgcacgcaggaaccgcaga
cacgcttttggtgaccatcagagctgcctgaagccttttactgaagacgactttgatttc
aatgactcagaaggtgatccagaatcacgtgagacggactggttgggcggcgctgatggt
aaaggttcataccaggtgaagggctggagtctgaagagacagcagtttgtggctttgctc
tggaaacgcttcctgtatgcccgacgttcccggaaaggtttctttgctcagatcgttctt
cctgctgtgttcgtgtgcatcgccctggttttcagtctcattgtccctccttttggaaag
tatcctagtctcgctctggagcccagcatgtatgaggagcagttctccttcttcagcaat
gatgcaccagaggacaggcatacgaacgggttacttgaagctctgatggacagtccggcc
tacaacgaacactgcacagatcagcagaacgatgtcagcaaatcatgtccagttaaagat
ggagagtgggtggttccagagattcccgagaccgttcaggacattttcctaaaagggaac
tggagtatggaaaacccatcgcctctgtgcgagtgcagttgcgatggaaggaaaaagatg
cttccggagtgtccgccaggagcaggaggtctgccaccccctcagattaaagtcaccgct
gctgaaaccttacagaatctgacaggcagaaacatttcagactacttggtgaaaacatac
gcacagattattgggaaaagcttgaagaacaagctctgggtcaacgaattcagatatggt
ggattctcattaggtgccagaagctcacaggccctccccgctggcgatgaggtcgccgat
gccatcgctcacattcgtaaaagcttcagtcttcaaacgggtacagcagctgaccgcttt
ctgggaagcctgtcgacttttatccaaggtcttgataccaagaacaatgtaaagatctgg
ttcaataataagggttggcacagtattggagcgttcctcagtgtcatgaacaatgccgtc
ctgcgtgctaatctgccccccggccaggagcggtccaaattcggcatcaaagctttcaac
catccactcaacctcaccaaagagcagctctcacaggtggcgctaatgacaacctcagtc
gacgtgctggtgtccatctgcgtcatattcgccatgtccttcgtcccggctagctttgtg
gtgttcctcatccaggagagagtgaataaagccaaacacatgcagttcatcagcggagtg
cagcccttcctctactggctagccaactttgtttgggacatgtgcaactacattgtcccg
gcgacccttgtcatcattatcttcctctgtttccaacaagaggcctatgtgtcctccacc
aatcttcctgttctcgccctcctgctgttgctctatgggtggtccataacacccctgatg
tacccggcgtcattcttctttaagattcccagtacagcatatgtggttttgaccagcgtt
aacatcctcattgggataaatggcagcgtatccacatttgtcctggagcttttcggcagc
aatgagattggaggcatcaacaacatcttgaagaacgtgttcctgatcttccctcacttc
tgtctcggtagaggtctcattgacatggtgaagaaccaagctatggctgacgccctggag
agatttggtgaaaatcgattccgctctcctctggcgtgggacatggtgggcaagaatctc
tttgctatggccatagagggcgtgattttcttctgcatcactgtccttatccagtaccgt
ttctgcatcaaggctaggccggttagcactaagctgaagcccatcggagaggaggatgag
gatgtggccagagagaggcagaggattctgggtggaggaggacatactgatattctggag
ctcaaacagctcaccaaggtgtataagaggaagcagaagccagctgtggacagactgtgt
gtgggaatcccaccaggagagtgttttgggttgctcggtgtgaacggagctggaaagaca
agcaccttcaaaatgctcacaggagattcagttgtcactagtggagaggcctacttggca
ggaaaaagtgtgctgacagagattgatgaagtgcatcagaatatgggctactgtccacag
tttgatgccattaatgacctgctgactggccgagaacatctggagttttatgccatcctg
cggggtgtccccgaaaaagaagtgtgcgaggtggcggattggggcattcgtaaactgggc
ctgatgaagtatgtagacaaagcggcaggaagctacagcgggggaaacatgaggaagctt
tccactgcaatggcgctcattggaggaccgccagtggtgttcttggacgaacccaccact
gggatggaccccaaagcccggcgagccctgtggaactgcatcctcagcatcattaaagag
ggacgctcggtcgttctgacctcacacagtatggaggagtgtgaagctctctgcactcgt
atggccatcatggtgaacggcaggttccgatgcctgggcagtgtgcagcacttaaagaac
aggtttggtgacgggtacaccatcatcctgcgggtggcgggagccgatccgcagctggag
ccggtgatggagttcatcgagcgggagctgccgggcagcaccctgaaggagaagcacaga
aacatgctccagtaccagctgccctcgtcactgacctccctcgcccgcatcttcagcatc
ctctccaagaacaaagagcagctccacatcgaggactactccgttacacagaccacttta
gaccaagtatttgttaattttgctaaggaccaaactgacgaggaccacttaaaagacatt
tccagtcagaaaaacgatgccgttgtggacatttctcaactgaacgccttcatcatagac
cagaaggccaaagagtcagtggtgtga
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integrated database retrieval system
